RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
PDE4C-211ENST00000597360 NUCB2P80303 420 aa18.97■□□□□ 0.63
PDE4C-211ENST00000597360 C9orf84Q5VXU9 1444 aa18.97■□□□□ 0.63
PDE4C-211ENST00000597360 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
PDE4C-211ENST00000597360 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
PDE4C-211ENST00000597360 PKP1Q13835 747 aa18.96■□□□□ 0.63
PDE4C-211ENST00000597360 NOB1Q9ULX3 412 aaKnown RBP18.96■□□□□ 0.63
PDE4C-211ENST00000597360 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
PDE4C-211ENST00000597360 POLR1AO95602 1720 aaPredicted RBP18.96■□□□□ 0.63
PDE4C-211ENST00000597360 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
PDE4C-211ENST00000597360 FANCAO15360 1455 aa18.96■□□□□ 0.63
PDE4C-211ENST00000597360 NLRP1Q9C000 1473 aa18.96■□□□□ 0.63
PDE4C-211ENST00000597360 KIF16BQ96L93 1317 aa18.96■□□□□ 0.62
PDE4C-211ENST00000597360 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
PDE4C-211ENST00000597360 SNX21Q969T3 373 aa18.95■□□□□ 0.62
PDE4C-211ENST00000597360 NINLQ9Y2I6 1382 aa18.95■□□□□ 0.62
PDE4C-211ENST00000597360 TERF1P54274 439 aa18.95■□□□□ 0.62
PDE4C-211ENST00000597360 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
PDE4C-211ENST00000597360 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
PDE4C-211ENST00000597360 TRIM27P14373 513 aa18.94■□□□□ 0.62
PDE4C-211ENST00000597360 DMTNQ08495 405 aa18.94■□□□□ 0.62
PDE4C-211ENST00000597360 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
PDE4C-211ENST00000597360 ZNF500O60304 480 aaPredicted RBP18.94■□□□□ 0.62
PDE4C-211ENST00000597360 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
PDE4C-211ENST00000597360 KIF3AQ9Y496 699 aa18.94■□□□□ 0.62
PDE4C-211ENST00000597360 TTC12Q9H892 705 aaPredicted RBP18.93■□□□□ 0.62
PDE4C-211ENST00000597360 ADGRL2O95490 1459 aa18.93■□□□□ 0.62
PDE4C-211ENST00000597360 RSPH4AQ5TD94 716 aa18.93■□□□□ 0.62
PDE4C-211ENST00000597360 TBC1D9Q6ZT07 1266 aa18.93■□□□□ 0.62
PDE4C-211ENST00000597360 PDCL2Q8N4E4 241 aa18.93■□□□□ 0.62
PDE4C-211ENST00000597360 ARAP3Q8WWN8 1544 aa18.93■□□□□ 0.62
PDE4C-211ENST00000597360 ABCC1P33527 1531 aa18.92■□□□□ 0.62
PDE4C-211ENST00000597360 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
PDE4C-211ENST00000597360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDE4C-211ENST00000597360 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
PDE4C-211ENST00000597360 MTHFSP49914 203 aa18.91■□□□□ 0.62
PDE4C-211ENST00000597360 ADGBQ8N7X0 1667 aa18.91■□□□□ 0.62
PDE4C-211ENST00000597360 RBM25P49756 843 aaKnown RBP18.9■□□□□ 0.62
PDE4C-211ENST00000597360 ZGPATQ8N5A5 531 aaKnown RBP18.9■□□□□ 0.62
PDE4C-211ENST00000597360 GDPD2Q9HCC8 539 aa18.9■□□□□ 0.62
PDE4C-211ENST00000597360 USP25Q9UHP3 1055 aa18.9■□□□□ 0.62
PDE4C-211ENST00000597360 IPO8O15397 1037 aaKnown RBP18.9■□□□□ 0.62
PDE4C-211ENST00000597360 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
PDE4C-211ENST00000597360 FAM69CQ0P6D2 419 aa18.9■□□□□ 0.62
PDE4C-211ENST00000597360 NAP1L2Q9ULW6 460 aaPredicted RBP18.9■□□□□ 0.62
PDE4C-211ENST00000597360 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.62
PDE4C-211ENST00000597360 ST18O60284 1047 aa18.89■□□□□ 0.61
PDE4C-211ENST00000597360 TSPY26PQ9H489 355 aa18.89■□□□□ 0.61
PDE4C-211ENST00000597360 HS1BP3Q53T59 392 aa18.89■□□□□ 0.61
PDE4C-211ENST00000597360 HMGN5P82970 282 aaKnown RBP18.88■□□□□ 0.61
PDE4C-211ENST00000597360 COL17A1Q9UMD9 1497 aaPredicted RBP18.88■□□□□ 0.61
PDE4C-211ENST00000597360 ZNF445P59923 1031 aa18.88■□□□□ 0.61
PDE4C-211ENST00000597360 SPC24Q8NBT2 197 aa18.88■□□□□ 0.61
PDE4C-211ENST00000597360 ZSCAN20P17040 1043 aaPredicted RBP18.88■□□□□ 0.61
PDE4C-211ENST00000597360 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
PDE4C-211ENST00000597360 SCAPERQ9BY12 1400 aa18.88■□□□□ 0.61
PDE4C-211ENST00000597360 LMBRD1Q9NUN5 540 aa18.88■□□□□ 0.61
PDE4C-211ENST00000597360 ZBTB22O15209 634 aa18.87■□□□□ 0.61
PDE4C-211ENST00000597360 U2AF2P26368 475 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDE4C-211ENST00000597360 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
PDE4C-211ENST00000597360 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
PDE4C-211ENST00000597360 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
PDE4C-211ENST00000597360 CDC45O75419 566 aa18.86■□□□□ 0.61
PDE4C-211ENST00000597360 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
PDE4C-211ENST00000597360 SYAP1Q96A49 352 aaPredicted RBP18.86■□□□□ 0.61
PDE4C-211ENST00000597360 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.86■□□□□ 0.61
PDE4C-211ENST00000597360 ATP2B3Q16720 1220 aa18.86■□□□□ 0.61
PDE4C-211ENST00000597360 INSRP06213 1382 aa18.85■□□□□ 0.61
PDE4C-211ENST00000597360 NOLC1Q14978 699 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDE4C-211ENST00000597360 CASC1Q6TDU7 716 aa18.85■□□□□ 0.61
PDE4C-211ENST00000597360 MAGI2Q86UL8 1455 aa18.85■□□□□ 0.61
PDE4C-211ENST00000597360 MYRIPQ8NFW9 859 aa18.85■□□□□ 0.61
PDE4C-211ENST00000597360 DRC7Q8IY82 874 aa18.84■□□□□ 0.61
PDE4C-211ENST00000597360 MCM5P33992 734 aa18.84■□□□□ 0.61
PDE4C-211ENST00000597360 RABEP1Q15276 862 aa18.84■□□□□ 0.61
PDE4C-211ENST00000597360 GPT2Q8TD30 523 aa18.84■□□□□ 0.61
PDE4C-211ENST00000597360 NSFL1CQ9UNZ2 370 aaKnown RBP18.84■□□□□ 0.61
PDE4C-211ENST00000597360 WDR63Q8IWG1 891 aa18.83■□□□□ 0.61
PDE4C-211ENST00000597360 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
PDE4C-211ENST00000597360 ERICH4A6NGS2 130 aa18.83■□□□□ 0.6
PDE4C-211ENST00000597360 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.6
PDE4C-211ENST00000597360 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.6
PDE4C-211ENST00000597360 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.6
PDE4C-211ENST00000597360 NUCB1Q02818 461 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 ZNF592Q92610 1267 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 MAST1Q9Y2H9 1570 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 LETM1O95202 739 aaPredicted RBP18.82■□□□□ 0.6
PDE4C-211ENST00000597360 PDIA4P13667 645 aaKnown RBP18.82■□□□□ 0.6
PDE4C-211ENST00000597360 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 SLC12A5Q9H2X9 1139 aa18.82■□□□□ 0.6
PDE4C-211ENST00000597360 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
PDE4C-211ENST00000597360 KCNJ4P48050 445 aa18.81■□□□□ 0.6
PDE4C-211ENST00000597360 NEK4P51957 841 aa18.81■□□□□ 0.6
PDE4C-211ENST00000597360 CHMP3Q9Y3E7 222 aa18.81■□□□□ 0.6
PDE4C-211ENST00000597360 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
PDE4C-211ENST00000597360 DDIT3P35638 169 aa18.8■□□□□ 0.6
PDE4C-211ENST00000597360 GLI2P10070 1586 aa18.8■□□□□ 0.6
PDE4C-211ENST00000597360 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms