RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 CDK11AQ9UQ88 783 aaPredicted RBP12.68□□□□□ -0.38
LINC00343-204ENST00000596398 PREX2Q70Z35 1606 aa12.68□□□□□ -0.38
LINC00343-204ENST00000596398 STRCP1A6NGW2 1772 aa12.67□□□□□ -0.38
LINC00343-204ENST00000596398 SMAPO00193 183 aa12.67□□□□□ -0.38
LINC00343-204ENST00000596398 OSBPP22059 807 aa12.67□□□□□ -0.38
LINC00343-204ENST00000596398 GGT6Q6P531 493 aa12.67□□□□□ -0.38
LINC00343-204ENST00000596398 SAMD9LQ8IVG5 1584 aa12.67□□□□□ -0.38
LINC00343-204ENST00000596398 LRRIQ1Q96JM4 1722 aa12.66□□□□□ -0.38
LINC00343-204ENST00000596398 KCNC4Q03721 635 aa12.66□□□□□ -0.38
LINC00343-204ENST00000596398 CLIP1P30622 1438 aa12.65□□□□□ -0.38
LINC00343-204ENST00000596398 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
LINC00343-204ENST00000596398 LRRC7Q96NW7 1537 aa12.64□□□□□ -0.39
LINC00343-204ENST00000596398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00343-204ENST00000596398 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
LINC00343-204ENST00000596398 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
LINC00343-204ENST00000596398 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
LINC00343-204ENST00000596398 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
LINC00343-204ENST00000596398 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
LINC00343-204ENST00000596398 TATDN2Q93075 761 aa12.63□□□□□ -0.39
LINC00343-204ENST00000596398 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
LINC00343-204ENST00000596398 PLXNC1O60486 1568 aa12.63□□□□□ -0.39
LINC00343-204ENST00000596398 SPAG9O60271 1321 aaKnown RBP12.62□□□□□ -0.39
LINC00343-204ENST00000596398 PPP4CP60510 307 aa12.62□□□□□ -0.39
LINC00343-204ENST00000596398 ANKLE2Q86XL3 938 aa12.62□□□□□ -0.39
LINC00343-204ENST00000596398 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
LINC00343-204ENST00000596398 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
LINC00343-204ENST00000596398 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
LINC00343-204ENST00000596398 A2MP01023 1474 aa12.61□□□□□ -0.39
LINC00343-204ENST00000596398 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00343-204ENST00000596398 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
LINC00343-204ENST00000596398 NPHP4O75161 1426 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-204ENST00000596398 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
LINC00343-204ENST00000596398 FMN1Q68DA7 1419 aa12.6□□□□□ -0.39
LINC00343-204ENST00000596398 TNRQ92752 1358 aa12.59□□□□□ -0.39
LINC00343-204ENST00000596398 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
LINC00343-204ENST00000596398 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
LINC00343-204ENST00000596398 MED14O60244 1454 aa12.58□□□□□ -0.4
LINC00343-204ENST00000596398 SYNMO15061 1565 aa12.57□□□□□ -0.4
LINC00343-204ENST00000596398 INO80Q9ULG1 1556 aaPredicted RBP12.57□□□□□ -0.4
LINC00343-204ENST00000596398 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
LINC00343-204ENST00000596398 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
LINC00343-204ENST00000596398 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
LINC00343-204ENST00000596398 XIRP1Q702N8 1843 aaKnown RBP12.55□□□□□ -0.4
LINC00343-204ENST00000596398 THEMISQ8N1K5 641 aaPredicted RBP12.55□□□□□ -0.4
LINC00343-204ENST00000596398 ARHGAP35Q9NRY4 1499 aa12.54□□□□□ -0.4
LINC00343-204ENST00000596398 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
LINC00343-204ENST00000596398 PADI6Q6TGC4 694 aa12.53□□□□□ -0.4
LINC00343-204ENST00000596398 TTC13Q8NBP0 860 aa12.53□□□□□ -0.4
LINC00343-204ENST00000596398 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
LINC00343-204ENST00000596398 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.4
LINC00343-204ENST00000596398 ADGBQ8N7X0 1667 aa12.52□□□□□ -0.4
LINC00343-204ENST00000596398 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
LINC00343-204ENST00000596398 PZPP20742 1482 aa12.52□□□□□ -0.41
LINC00343-204ENST00000596398 RNF40O75150 1001 aa12.51□□□□□ -0.41
LINC00343-204ENST00000596398 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
LINC00343-204ENST00000596398 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
LINC00343-204ENST00000596398 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
LINC00343-204ENST00000596398 FAM135BQ49AJ0 1406 aa12.5□□□□□ -0.41
LINC00343-204ENST00000596398 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
LINC00343-204ENST00000596398 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
LINC00343-204ENST00000596398 GPATCH8Q9UKJ3 1502 aaKnown RBP12.49□□□□□ -0.41
LINC00343-204ENST00000596398 NLRP1Q9C000 1473 aa12.49□□□□□ -0.41
LINC00343-204ENST00000596398 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
LINC00343-204ENST00000596398 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
LINC00343-204ENST00000596398 MTRQ99707 1265 aa12.49□□□□□ -0.41
LINC00343-204ENST00000596398 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
LINC00343-204ENST00000596398 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
LINC00343-204ENST00000596398 EEA1Q15075 1411 aa12.47□□□□□ -0.41
LINC00343-204ENST00000596398 IL21Q9HBE4 155 aa12.47□□□□□ -0.41
LINC00343-204ENST00000596398 KIAA1107Q9UPP5 1409 aa12.46□□□□□ -0.41
LINC00343-204ENST00000596398 WASHC2CQ9Y4E1 1318 aa12.46□□□□□ -0.41
LINC00343-204ENST00000596398 KIF3BO15066 747 aa12.46□□□□□ -0.41
LINC00343-204ENST00000596398 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.41
LINC00343-204ENST00000596398 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
LINC00343-204ENST00000596398 APLP1P51693 650 aa12.45□□□□□ -0.42
LINC00343-204ENST00000596398 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
LINC00343-204ENST00000596398 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
LINC00343-204ENST00000596398 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
LINC00343-204ENST00000596398 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-204ENST00000596398 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
LINC00343-204ENST00000596398 LTKP29376 864 aa12.42□□□□□ -0.42
LINC00343-204ENST00000596398 SLF2Q8IX21 1173 aa12.42□□□□□ -0.42
LINC00343-204ENST00000596398 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
LINC00343-204ENST00000596398 EYA1Q99502 592 aa12.42□□□□□ -0.42
LINC00343-204ENST00000596398 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
LINC00343-204ENST00000596398 LRP6O75581 1613 aa12.41□□□□□ -0.42
LINC00343-204ENST00000596398 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
LINC00343-204ENST00000596398 ZNF516Q92618 1163 aa12.41□□□□□ -0.42
LINC00343-204ENST00000596398 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
LINC00343-204ENST00000596398 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.42
LINC00343-204ENST00000596398 UBR1Q8IWV7 1749 aa12.4□□□□□ -0.42
LINC00343-204ENST00000596398 JCADQ9P266 1359 aa12.39□□□□□ -0.43
LINC00343-204ENST00000596398 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
LINC00343-204ENST00000596398 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
LINC00343-204ENST00000596398 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
LINC00343-204ENST00000596398 PTGDRQ13258 359 aa12.38□□□□□ -0.43
LINC00343-204ENST00000596398 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
LINC00343-204ENST00000596398 TXNDC2Q86VQ3 553 aa12.38□□□□□ -0.43
LINC00343-204ENST00000596398 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
LINC00343-204ENST00000596398 MBD5Q9P267 1494 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms