RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 NUDT16Q96DE0 195 aaKnown RBP23.22■■□□□ 1.31
LINC02560-201ENST00000596379 A0A0G2JS52 829 aa23.21■■□□□ 1.31
LINC02560-201ENST00000596379 MYT1Q01538 1121 aa23.21■■□□□ 1.31
LINC02560-201ENST00000596379 SF3B2Q13435 895 aaKnown RBP23.21■■□□□ 1.31
LINC02560-201ENST00000596379 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
LINC02560-201ENST00000596379 COL14A1Q05707 1796 aaKnown RBP23.2■■□□□ 1.3
LINC02560-201ENST00000596379 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
LINC02560-201ENST00000596379 CDK19Q9BWU1 502 aa23.19■■□□□ 1.3
LINC02560-201ENST00000596379 ATP7BP35670 1465 aa23.17■■□□□ 1.3
LINC02560-201ENST00000596379 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
LINC02560-201ENST00000596379 CRYBG1Q9Y4K1 1723 aa23.16■■□□□ 1.3
LINC02560-201ENST00000596379 PRDM11Q9NQV5 511 aa23.15■■□□□ 1.3
LINC02560-201ENST00000596379 SPATA31A5Q5VU36 1347 aa23.14■■□□□ 1.3
LINC02560-201ENST00000596379 SPATA31A7Q8IWB4 1347 aa23.14■■□□□ 1.3
LINC02560-201ENST00000596379 SRCAPQ6ZRS2 3230 aa23.14■■□□□ 1.29
LINC02560-201ENST00000596379 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
LINC02560-201ENST00000596379 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
LINC02560-201ENST00000596379 KIAA1210Q9ULL0 1709 aa23.12■■□□□ 1.29
LINC02560-201ENST00000596379 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
LINC02560-201ENST00000596379 ACEP12821 1306 aa23.11■■□□□ 1.29
LINC02560-201ENST00000596379 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
LINC02560-201ENST00000596379 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
LINC02560-201ENST00000596379 CHRNA2Q15822 529 aa23.1■■□□□ 1.29
LINC02560-201ENST00000596379 FAM182BQ5T319 152 aa23.1■■□□□ 1.29
LINC02560-201ENST00000596379 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
LINC02560-201ENST00000596379 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
LINC02560-201ENST00000596379 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
LINC02560-201ENST00000596379 BAG6P46379 1132 aa23.08■■□□□ 1.29
LINC02560-201ENST00000596379 TOPAZ1Q8N9V7 1692 aa23.07■■□□□ 1.28
LINC02560-201ENST00000596379 STRN4Q9NRL3 753 aa23.07■■□□□ 1.28
LINC02560-201ENST00000596379 PHRF1Q9P1Y6 1649 aaKnown RBP23.06■■□□□ 1.28
LINC02560-201ENST00000596379 SPATA31A1Q5TZJ5 1347 aa23.06■■□□□ 1.28
LINC02560-201ENST00000596379 ABTB2Q8N961 1025 aa23.05■■□□□ 1.28
LINC02560-201ENST00000596379 SRPK2P78362 688 aaKnown RBP23.04■■□□□ 1.28
LINC02560-201ENST00000596379 THSD7AQ9UPZ6 1657 aa23.03■■□□□ 1.28
LINC02560-201ENST00000596379 EVA1CP58658 441 aa23.02■■□□□ 1.28
LINC02560-201ENST00000596379 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
LINC02560-201ENST00000596379 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
LINC02560-201ENST00000596379 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
LINC02560-201ENST00000596379 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
LINC02560-201ENST00000596379 RGPD1P0DJD0 1748 aa23.01■■□□□ 1.27
LINC02560-201ENST00000596379 PSDA5PKW4 1024 aaPredicted RBP23■■□□□ 1.27
LINC02560-201ENST00000596379 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
LINC02560-201ENST00000596379 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
LINC02560-201ENST00000596379 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 USP19O94966 1318 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 LARP1Q6PKG0 1096 aaKnown RBP22.96■■□□□ 1.27
LINC02560-201ENST00000596379 FAM196AQ6ZSG2 479 aa22.96■■□□□ 1.27
LINC02560-201ENST00000596379 SSH2Q76I76 1423 aa22.96■■□□□ 1.27
LINC02560-201ENST00000596379 CPDO75976 1380 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 GCP02774 474 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 BARGINQ6ZT62 677 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
LINC02560-201ENST00000596379 TRIM37O94972 964 aa22.94■■□□□ 1.26
LINC02560-201ENST00000596379 EZH2Q15910 746 aaKnown RBP22.93■■□□□ 1.26
LINC02560-201ENST00000596379 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
LINC02560-201ENST00000596379 TNS1Q9HBL0 1735 aaKnown RBP22.93■■□□□ 1.26
LINC02560-201ENST00000596379 DISP2A7MBM2 1401 aa22.92■■□□□ 1.26
LINC02560-201ENST00000596379 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
LINC02560-201ENST00000596379 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
LINC02560-201ENST00000596379 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
LINC02560-201ENST00000596379 LMO7Q8WWI1 1683 aa22.91■■□□□ 1.26
LINC02560-201ENST00000596379 LRP5O75197 1615 aa22.9■■□□□ 1.26
LINC02560-201ENST00000596379 NLRP6P59044 892 aa22.9■■□□□ 1.26
LINC02560-201ENST00000596379 R3HDM1Q15032 1099 aaKnown RBP22.9■■□□□ 1.26
LINC02560-201ENST00000596379 CAMKK2Q96RR4 588 aa22.9■■□□□ 1.26
LINC02560-201ENST00000596379 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.25
LINC02560-201ENST00000596379 APBA3O96018 575 aa22.89■■□□□ 1.25
LINC02560-201ENST00000596379 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
LINC02560-201ENST00000596379 USP6P35125 1406 aa22.88■■□□□ 1.25
LINC02560-201ENST00000596379 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
LINC02560-201ENST00000596379 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
LINC02560-201ENST00000596379 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
LINC02560-201ENST00000596379 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
LINC02560-201ENST00000596379 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.25
LINC02560-201ENST00000596379 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
LINC02560-201ENST00000596379 SLIT3O75094 1523 aa22.82■■□□□ 1.24
LINC02560-201ENST00000596379 CRB1P82279 1406 aa22.82■■□□□ 1.24
LINC02560-201ENST00000596379 PARD3Q8TEW0 1356 aa22.81■■□□□ 1.24
LINC02560-201ENST00000596379 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
LINC02560-201ENST00000596379 PIK3C2AO00443 1686 aa22.8■■□□□ 1.24
LINC02560-201ENST00000596379 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
LINC02560-201ENST00000596379 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
LINC02560-201ENST00000596379 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
LINC02560-201ENST00000596379 AXIN2Q9Y2T1 843 aa22.78■■□□□ 1.24
LINC02560-201ENST00000596379 COL18A1P39060 1754 aa22.78■■□□□ 1.24
LINC02560-201ENST00000596379 AKAP12Q02952 1782 aa22.76■■□□□ 1.23
LINC02560-201ENST00000596379 RREB1Q92766 1687 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 C11orf95C9JLR9 678 aaPredicted RBP22.75■■□□□ 1.23
LINC02560-201ENST00000596379 SOX12O15370 315 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 NBPF14Q5TI25 921 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 KCNH5Q8NCM2 988 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 DDB1Q16531 1140 aa22.74■■□□□ 1.23
LINC02560-201ENST00000596379 WDR17Q8IZU2 1322 aa22.73■■□□□ 1.23
LINC02560-201ENST00000596379 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
LINC02560-201ENST00000596379 NUP188Q5SRE5 1749 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms