RNA–Protein interactions for RNA: ENST00000596248.1

ZNF552-203, Transcript of zinc finger protein 552, humanhuman

TSL 2

Gene ZNF552, Length 1,703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF552-203ENST00000596248 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
ZNF552-203ENST00000596248 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
ZNF552-203ENST00000596248 SHPRHQ149N8 1683 aa20.87■□□□□ 0.93
ZNF552-203ENST00000596248 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
ZNF552-203ENST00000596248 DCCP43146 1447 aa20.86■□□□□ 0.93
ZNF552-203ENST00000596248 ZRANB1Q9UGI0 708 aa20.86■□□□□ 0.93
ZNF552-203ENST00000596248 PHF8Q9UPP1 1060 aa20.85■□□□□ 0.93
ZNF552-203ENST00000596248 MARF1Q9Y4F3 1742 aaKnown RBP20.85■□□□□ 0.93
ZNF552-203ENST00000596248 KIF1AQ12756 1690 aa20.85■□□□□ 0.93
ZNF552-203ENST00000596248 DMRT2Q9Y5R5 561 aa20.84■□□□□ 0.93
ZNF552-203ENST00000596248 HNRNPUQ00839 825 aaKnown RBP eCLIP20.84■□□□□ 0.93
ZNF552-203ENST00000596248 ESCO1Q5FWF5 840 aa20.84■□□□□ 0.93
ZNF552-203ENST00000596248 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
ZNF552-203ENST00000596248 MST1RQ04912 1400 aa20.83■□□□□ 0.93
ZNF552-203ENST00000596248 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
ZNF552-203ENST00000596248 MSH6P52701 1360 aa20.81■□□□□ 0.92
ZNF552-203ENST00000596248 MTHFSP49914 203 aa20.81■□□□□ 0.92
ZNF552-203ENST00000596248 ATF3P18847 181 aa20.81■□□□□ 0.92
ZNF552-203ENST00000596248 USP54Q70EL1 1684 aa20.81■□□□□ 0.92
ZNF552-203ENST00000596248 OVOS2A0A0J9YW53 1432 aa20.81■□□□□ 0.92
ZNF552-203ENST00000596248 OVOS2Q6IE36 1432 aa20.81■□□□□ 0.92
ZNF552-203ENST00000596248 TTC21AQ8NDW8 1320 aa20.8■□□□□ 0.92
ZNF552-203ENST00000596248 COG3Q96JB2 828 aa20.79■□□□□ 0.92
ZNF552-203ENST00000596248 FBLN1P23142 703 aa20.78■□□□□ 0.92
ZNF552-203ENST00000596248 TRPM3Q9HCF6 1732 aaPredicted RBP20.78■□□□□ 0.92
ZNF552-203ENST00000596248 CADPS2Q86UW7 1296 aa20.77■□□□□ 0.92
ZNF552-203ENST00000596248 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.92
ZNF552-203ENST00000596248 COL3A1P02461 1466 aaPredicted RBP20.76■□□□□ 0.91
ZNF552-203ENST00000596248 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
ZNF552-203ENST00000596248 BLMP54132 1417 aaPredicted RBP20.75■□□□□ 0.91
ZNF552-203ENST00000596248 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
ZNF552-203ENST00000596248 FOXO3O43524 673 aa20.74■□□□□ 0.91
ZNF552-203ENST00000596248 AATKQ6ZMQ8 1374 aa20.74■□□□□ 0.91
ZNF552-203ENST00000596248 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
ZNF552-203ENST00000596248 PSME1Q06323 249 aa20.73■□□□□ 0.91
ZNF552-203ENST00000596248 USP31Q70CQ4 1352 aa20.73■□□□□ 0.91
ZNF552-203ENST00000596248 SMG6Q86US8 1419 aaKnown RBP20.73■□□□□ 0.91
ZNF552-203ENST00000596248 POLKQ9UBT6 870 aa20.73■□□□□ 0.91
ZNF552-203ENST00000596248 INSRP06213 1382 aa20.73■□□□□ 0.91
ZNF552-203ENST00000596248 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
ZNF552-203ENST00000596248 CFAP53Q96M91 514 aa20.73■□□□□ 0.91
ZNF552-203ENST00000596248 PEAK1Q9H792 1746 aa20.72■□□□□ 0.91
ZNF552-203ENST00000596248 XPCQ01831 940 aaPredicted RBP20.71■□□□□ 0.91
ZNF552-203ENST00000596248 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
ZNF552-203ENST00000596248 ALS2Q96Q42 1657 aa20.7■□□□□ 0.91
ZNF552-203ENST00000596248 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
ZNF552-203ENST00000596248 PNPLA6Q8IY17 1366 aa20.7■□□□□ 0.9
ZNF552-203ENST00000596248 ZBED9Q6R2W3 1325 aa20.7■□□□□ 0.9
ZNF552-203ENST00000596248 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
ZNF552-203ENST00000596248 NUTM2GQ5VZR2 741 aa20.7■□□□□ 0.9
ZNF552-203ENST00000596248 ABTB2Q8N961 1025 aa20.7■□□□□ 0.9
ZNF552-203ENST00000596248 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
ZNF552-203ENST00000596248 LTN1O94822 1766 aa20.69■□□□□ 0.9
ZNF552-203ENST00000596248 NLRP6P59044 892 aa20.69■□□□□ 0.9
ZNF552-203ENST00000596248 PPM1GO15355 546 aaPredicted RBP20.68■□□□□ 0.9
ZNF552-203ENST00000596248 SOX12O15370 315 aa20.67■□□□□ 0.9
ZNF552-203ENST00000596248 KRT28Q7Z3Y7 464 aa20.66■□□□□ 0.9
ZNF552-203ENST00000596248 DDX17Q92841 729 aaKnown RBP20.66■□□□□ 0.9
ZNF552-203ENST00000596248 BRINP3Q76B58 766 aa20.64■□□□□ 0.89
ZNF552-203ENST00000596248 CCDC146Q8IYE0 955 aa20.64■□□□□ 0.89
ZNF552-203ENST00000596248 SLAIN2Q9P270 581 aa20.64■□□□□ 0.89
ZNF552-203ENST00000596248 PXDNQ92626 1479 aa20.63■□□□□ 0.89
ZNF552-203ENST00000596248 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
ZNF552-203ENST00000596248 NFAT5O94916 1531 aa20.62■□□□□ 0.89
ZNF552-203ENST00000596248 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
ZNF552-203ENST00000596248 NPHP3Q7Z494 1330 aa20.61■□□□□ 0.89
ZNF552-203ENST00000596248 NHSL1Q5SYE7 1610 aa20.61■□□□□ 0.89
ZNF552-203ENST00000596248 MAP3K19Q56UN5 1328 aa20.6■□□□□ 0.89
ZNF552-203ENST00000596248 SLIT3O75094 1523 aa20.6■□□□□ 0.89
ZNF552-203ENST00000596248 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
ZNF552-203ENST00000596248 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
ZNF552-203ENST00000596248 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
ZNF552-203ENST00000596248 NUDCQ9Y266 331 aa20.6■□□□□ 0.89
ZNF552-203ENST00000596248 CRYBG1Q9Y4K1 1723 aa20.59■□□□□ 0.89
ZNF552-203ENST00000596248 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.89
ZNF552-203ENST00000596248 PHRF1Q9P1Y6 1649 aaKnown RBP20.58■□□□□ 0.89
ZNF552-203ENST00000596248 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
ZNF552-203ENST00000596248 PELP1Q8IZL8 1130 aaKnown RBP20.58■□□□□ 0.88
ZNF552-203ENST00000596248 SBNO1A3KN83 1393 aa20.58■□□□□ 0.88
ZNF552-203ENST00000596248 RGPD1P0DJD0 1748 aa20.57■□□□□ 0.88
ZNF552-203ENST00000596248 MED1Q15648 1581 aaPredicted RBP20.57■□□□□ 0.88
ZNF552-203ENST00000596248 TNS3Q68CZ2 1445 aa20.57■□□□□ 0.88
ZNF552-203ENST00000596248 IQSEC2Q5JU85 1478 aa20.57■□□□□ 0.88
ZNF552-203ENST00000596248 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
ZNF552-203ENST00000596248 IL13P35225 146 aa20.56■□□□□ 0.88
ZNF552-203ENST00000596248 APAF1O14727 1248 aa20.56■□□□□ 0.88
ZNF552-203ENST00000596248 HSP90AB2PQ58FF8 381 aa20.56■□□□□ 0.88
ZNF552-203ENST00000596248 FLT4P35916 1363 aa20.55■□□□□ 0.88
ZNF552-203ENST00000596248 PLEKHG5O94827 1062 aa20.55■□□□□ 0.88
ZNF552-203ENST00000596248 USP19O94966 1318 aa20.55■□□□□ 0.88
ZNF552-203ENST00000596248 RGPD5Q99666 1765 aa20.54■□□□□ 0.88
ZNF552-203ENST00000596248 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
ZNF552-203ENST00000596248 AMPHP49418 695 aa20.53■□□□□ 0.88
ZNF552-203ENST00000596248 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
ZNF552-203ENST00000596248 SPATA31A3Q5VYP0 1347 aa20.52■□□□□ 0.88
ZNF552-203ENST00000596248 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
ZNF552-203ENST00000596248 KIF24Q5T7B8 1368 aa20.51■□□□□ 0.87
ZNF552-203ENST00000596248 GCP02774 474 aa20.51■□□□□ 0.87
ZNF552-203ENST00000596248 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
ZNF552-203ENST00000596248 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms