RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 ADGRB2O60241 1585 aa14.47□□□□□ -0.09
NOTCH3-202ENST00000595045 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
NOTCH3-202ENST00000595045 PRR36Q9H6K5 1346 aa14.46□□□□□ -0.09
NOTCH3-202ENST00000595045 TRIM37O94972 964 aa14.46□□□□□ -0.09
NOTCH3-202ENST00000595045 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
NOTCH3-202ENST00000595045 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
NOTCH3-202ENST00000595045 ADGRB1O14514 1584 aa14.44□□□□□ -0.1
NOTCH3-202ENST00000595045 UTRNP46939 3433 aa14.44□□□□□ -0.1
NOTCH3-202ENST00000595045 FAM196AQ6ZSG2 479 aa14.43□□□□□ -0.1
NOTCH3-202ENST00000595045 PARD3Q8TEW0 1356 aa14.43□□□□□ -0.1
NOTCH3-202ENST00000595045 RREB1Q92766 1687 aa14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 SPATA31A1Q5TZJ5 1347 aa14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 ACIN1Q9UKV3 1341 aaKnown RBP14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 APBA3O96018 575 aa14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 PRDM11Q9NQV5 511 aa14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 GPRASP1Q5JY77 1395 aa14.42□□□□□ -0.1
NOTCH3-202ENST00000595045 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
NOTCH3-202ENST00000595045 NUP188Q5SRE5 1749 aa14.41□□□□□ -0.1
NOTCH3-202ENST00000595045 POGKQ9P215 609 aa14.41□□□□□ -0.1
NOTCH3-202ENST00000595045 RAB3GAP2Q9H2M9 1393 aa14.41□□□□□ -0.1
NOTCH3-202ENST00000595045 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
NOTCH3-202ENST00000595045 KIAA0232Q92628 1395 aa14.38□□□□□ -0.11
NOTCH3-202ENST00000595045 WASLO00401 505 aaPredicted RBP14.38□□□□□ -0.11
NOTCH3-202ENST00000595045 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
NOTCH3-202ENST00000595045 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
NOTCH3-202ENST00000595045 STRN4Q9NRL3 753 aa14.38□□□□□ -0.11
NOTCH3-202ENST00000595045 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
NOTCH3-202ENST00000595045 TULP4Q9NRJ4 1543 aa14.37□□□□□ -0.11
NOTCH3-202ENST00000595045 EIF3AQ14152 1382 aaKnown RBP14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 NBPF8Q3BBV2 869 aa14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 NBPF14Q5TI25 921 aa14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 DCAF11Q8TEB1 546 aa14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 SPON1Q9HCB6 807 aa14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
NOTCH3-202ENST00000595045 PHRF1Q9P1Y6 1649 aaKnown RBP14.35□□□□□ -0.11
NOTCH3-202ENST00000595045 PDE3BQ13370 1112 aa14.35□□□□□ -0.11
NOTCH3-202ENST00000595045 USP35Q9P2H5 1018 aa14.35□□□□□ -0.11
NOTCH3-202ENST00000595045 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
NOTCH3-202ENST00000595045 KCNQ2O43526 872 aa14.34□□□□□ -0.11
NOTCH3-202ENST00000595045 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
NOTCH3-202ENST00000595045 BARGINQ6ZT62 677 aa14.34□□□□□ -0.11
NOTCH3-202ENST00000595045 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
NOTCH3-202ENST00000595045 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.12
NOTCH3-202ENST00000595045 SSH2Q76I76 1423 aa14.32□□□□□ -0.12
NOTCH3-202ENST00000595045 EVA1CP58658 441 aa14.31□□□□□ -0.12
NOTCH3-202ENST00000595045 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
NOTCH3-202ENST00000595045 NUDT16Q96DE0 195 aaKnown RBP14.31□□□□□ -0.12
NOTCH3-202ENST00000595045 ITSN1Q15811 1721 aa14.3□□□□□ -0.12
NOTCH3-202ENST00000595045 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
NOTCH3-202ENST00000595045 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
NOTCH3-202ENST00000595045 STAC3Q96MF2 364 aa14.3□□□□□ -0.12
NOTCH3-202ENST00000595045 ATP7BP35670 1465 aa14.3□□□□□ -0.12
NOTCH3-202ENST00000595045 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
NOTCH3-202ENST00000595045 CDK19Q9BWU1 502 aa14.28□□□□□ -0.12
NOTCH3-202ENST00000595045 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
NOTCH3-202ENST00000595045 CASZ1Q86V15 1759 aa14.27□□□□□ -0.12
NOTCH3-202ENST00000595045 PARP4Q9UKK3 1724 aaKnown RBP14.27□□□□□ -0.12
NOTCH3-202ENST00000595045 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
NOTCH3-202ENST00000595045 POLR3AO14802 1390 aaPredicted RBP14.27□□□□□ -0.12
NOTCH3-202ENST00000595045 PLEKHG3A1L390 1219 aa14.27□□□□□ -0.13
NOTCH3-202ENST00000595045 SBF2Q86WG5 1849 aa14.27□□□□□ -0.13
NOTCH3-202ENST00000595045 RGPD3A6NKT7 1758 aaPredicted RBP14.27□□□□□ -0.13
NOTCH3-202ENST00000595045 RGPD4Q7Z3J3 1758 aa14.27□□□□□ -0.13
NOTCH3-202ENST00000595045 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
NOTCH3-202ENST00000595045 ZNF784Q8NCA9 323 aaPredicted RBP14.26□□□□□ -0.13
NOTCH3-202ENST00000595045 ANO8Q9HCE9 1232 aaPredicted RBP14.26□□□□□ -0.13
NOTCH3-202ENST00000595045 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
NOTCH3-202ENST00000595045 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
NOTCH3-202ENST00000595045 CPDO75976 1380 aa14.25□□□□□ -0.13
NOTCH3-202ENST00000595045 ACEP12821 1306 aa14.25□□□□□ -0.13
NOTCH3-202ENST00000595045 ARHGEF28Q8N1W1 1705 aaKnown RBP14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 GOLGB1Q14789 3259 aaKnown RBP14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 C11orf95C9JLR9 678 aaPredicted RBP14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 PDGFDQ9GZP0 370 aaPredicted RBP14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 OVOS2A0A0G2JMS6 1433 aa14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 OVOS2A0A0J9YW53 1432 aa14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 OVOS2Q6IE36 1432 aa14.24□□□□□ -0.13
NOTCH3-202ENST00000595045 USP19O94966 1318 aa14.23□□□□□ -0.13
NOTCH3-202ENST00000595045 PLSCR1O15162 318 aa14.23□□□□□ -0.13
NOTCH3-202ENST00000595045 MYOM1P52179 1685 aa14.23□□□□□ -0.13
NOTCH3-202ENST00000595045 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
NOTCH3-202ENST00000595045 ZBTB7AO95365 584 aa14.22□□□□□ -0.13
NOTCH3-202ENST00000595045 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
NOTCH3-202ENST00000595045 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
NOTCH3-202ENST00000595045 CHD4Q14839 1912 aa14.21□□□□□ -0.13
NOTCH3-202ENST00000595045 PTGER2P43116 358 aa14.21□□□□□ -0.13
NOTCH3-202ENST00000595045 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.13
NOTCH3-202ENST00000595045 LRRC37A3O60309 1634 aa14.2□□□□□ -0.14
NOTCH3-202ENST00000595045 PROM2Q8N271 834 aa14.2□□□□□ -0.14
NOTCH3-202ENST00000595045 CRB1P82279 1406 aa14.2□□□□□ -0.14
NOTCH3-202ENST00000595045 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
NOTCH3-202ENST00000595045 GCP02774 474 aa14.19□□□□□ -0.14
NOTCH3-202ENST00000595045 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
NOTCH3-202ENST00000595045 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
NOTCH3-202ENST00000595045 DDB1Q16531 1140 aa14.17□□□□□ -0.14
NOTCH3-202ENST00000595045 NLRP13Q86W25 1043 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms