RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 FAM193AP78312 1265 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 NBPF1Q3BBV0 1214 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 MAF1Q9H063 256 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 SH3BP1Q9Y3L3 701 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 CFAP65Q6ZU64 1925 aaKnown RBP5.56□□□□□ -1.52
LRIT3-202ENST00000594814 CEP152O94986 1710 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 NPATQ14207 1427 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 RAD21O60216 631 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 TSHZ1Q6ZSZ6 1077 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 PRKRIP1Q9H875 184 aaPredicted RBP5.56□□□□□ -1.52
LRIT3-202ENST00000594814 KDM4AO75164 1064 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 CNGB1Q14028 1251 aaPredicted RBP5.56□□□□□ -1.52
LRIT3-202ENST00000594814 PSMD1Q99460 953 aa5.56□□□□□ -1.52
LRIT3-202ENST00000594814 MCM5P33992 734 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 LRPPRCP42704 1394 aaKnown RBP5.55□□□□□ -1.52
LRIT3-202ENST00000594814 CCDC7Q96M83 1385 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 LMTK3Q96Q04 1460 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 NINLQ9Y2I6 1382 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 PREX1Q8TCU6 1659 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 BRD4O60885 1362 aaPredicted RBP5.55□□□□□ -1.52
LRIT3-202ENST00000594814 EXOC5O00471 708 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 SLC20A2Q08357 652 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 PPP4R3CPQ6ZMV5 832 aa5.55□□□□□ -1.52
LRIT3-202ENST00000594814 FAM161AQ3B820 660 aa5.54□□□□□ -1.52
LRIT3-202ENST00000594814 NOM1Q5C9Z4 860 aaKnown RBP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 CLTCL1P53675 1640 aa5.54□□□□□ -1.52
LRIT3-202ENST00000594814 ABCC3O15438 1527 aa5.54□□□□□ -1.52
LRIT3-202ENST00000594814 LETM1O95202 739 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 EIF4G2P78344 907 aaKnown RBP eCLIP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 CSPP1Q1MSJ5 1256 aa5.54□□□□□ -1.52
LRIT3-202ENST00000594814 CENPQQ7L2Z9 268 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 DCAF11Q8TEB1 546 aa5.54□□□□□ -1.52
LRIT3-202ENST00000594814 ZC3H15Q8WU90 426 aaKnown RBP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 PTPRTO14522 1441 aa5.54□□□□□ -1.52
LRIT3-202ENST00000594814 A0A0U1RQG5 324 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 MKRN3Q13064 507 aaKnown RBP5.54□□□□□ -1.52
LRIT3-202ENST00000594814 SPATA31E1Q6ZUB1 1445 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 ZNF142P52746 1687 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-202ENST00000594814 SYNMO15061 1565 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 SOCS7O14512 581 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 ZMYND10O75800 440 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 RRP1P56182 461 aaKnown RBP5.53□□□□□ -1.52
LRIT3-202ENST00000594814 KIAA1522Q9P206 1035 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-202ENST00000594814 RNF17Q9BXT8 1623 aaKnown RBP5.53□□□□□ -1.52
LRIT3-202ENST00000594814 CFAP74Q9C0B2 1584 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 DYNC1I1O14576 645 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 IDI1Q13907 227 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 SKOR2Q2VWA4 1001 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-202ENST00000594814 TXNDC2Q86VQ3 553 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 CREBRFQ8IUR6 639 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 RRAGDQ9NQL2 400 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-202ENST00000594814 MROH2AA6NES4 1674 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 ADGRF5Q8IZF2 1346 aa5.53□□□□□ -1.52
LRIT3-202ENST00000594814 KDM4FA0A1W2PPD8 638 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 IRF6O14896 467 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 ARHGAP31Q2M1Z3 1444 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 A6NJR5 290 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 DDX11L8A8MPP1 907 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 MYBPC2Q14324 1141 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 TSPYL1Q9H0U9 437 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 STRCQ7RTU9 1775 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 EFCAB6Q5THR3 1501 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 ESPNB1AK53 854 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 CANXP27824 592 aaKnown RBP5.52□□□□□ -1.53
LRIT3-202ENST00000594814 ANAPC15P60006 121 aa5.52□□□□□ -1.53
LRIT3-202ENST00000594814 OFD1O75665 1012 aa5.51□□□□□ -1.53
LRIT3-202ENST00000594814 DMTNQ08495 405 aa5.51□□□□□ -1.53
LRIT3-202ENST00000594814 NKX1-1Q15270 411 aaPredicted RBP5.51□□□□□ -1.53
LRIT3-202ENST00000594814 CCDC82Q8N4S0 544 aa5.51□□□□□ -1.53
LRIT3-202ENST00000594814 ARHGEF1Q92888 912 aaKnown RBP5.51□□□□□ -1.53
LRIT3-202ENST00000594814 CHMP4BQ9H444 224 aaKnown RBP5.51□□□□□ -1.53
LRIT3-202ENST00000594814 MRS2Q9HD23 443 aa5.51□□□□□ -1.53
LRIT3-202ENST00000594814 EIF2AK4Q9P2K8 1649 aaKnown RBP5.51□□□□□ -1.53
LRIT3-202ENST00000594814 HSPA5P11021 654 aaKnown RBP5.51□□□□□ -1.53
LRIT3-202ENST00000594814 CCDC173Q0VFZ6 552 aa5.51□□□□□ -1.53
LRIT3-202ENST00000594814 TET3O43151 1660 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 CLTCQ00610 1675 aaKnown RBP5.5□□□□□ -1.53
LRIT3-202ENST00000594814 LMTK2Q8IWU2 1503 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 ARHGEF40Q8TER5 1519 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 APLP1P51693 650 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 NGEFQ8N5V2 710 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 CAMSAP1Q5T5Y3 1602 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 NOS1P29475 1434 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 MAPK8IP3Q9UPT6 1336 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 RALBP1Q15311 655 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 ZNF830Q96NB3 372 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-202ENST00000594814 LTBP4Q8N2S1 1624 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 TRPM2O94759 1503 aa5.5□□□□□ -1.53
LRIT3-202ENST00000594814 SPHKAPQ2M3C7 1700 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 RBM47A0AV96 593 aaKnown RBP5.49□□□□□ -1.53
LRIT3-202ENST00000594814 RGL2O15211 777 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 CDCA8Q53HL2 280 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 SPRYD3Q8NCJ5 442 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 MYH16Q9H6N6 1097 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 TMEM51Q9NW97 253 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 CFAP70Q5T0N1 1121 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 SPTY2D1Q68D10 685 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-202ENST00000594814 TMEM132EQ6IEE7 984 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 PPP1R9BQ96SB3 815 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms