RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 PRDM11Q9NQV5 511 aa19.89■□□□□ 0.77
ARHGEF1-208ENST00000594417 ATP7BP35670 1465 aa19.88■□□□□ 0.77
ARHGEF1-208ENST00000594417 ABTB2Q8N961 1025 aa19.87■□□□□ 0.77
ARHGEF1-208ENST00000594417 ONECUT3O60422 494 aaPredicted RBP19.85■□□□□ 0.77
ARHGEF1-208ENST00000594417 ZC3H6P61129 1189 aaKnown RBP19.85■□□□□ 0.77
ARHGEF1-208ENST00000594417 POLR3AO14802 1390 aaPredicted RBP19.84■□□□□ 0.77
ARHGEF1-208ENST00000594417 ROCK2O75116 1388 aaKnown RBP19.84■□□□□ 0.77
ARHGEF1-208ENST00000594417 CABP1Q9NZU7 370 aa19.84■□□□□ 0.77
ARHGEF1-208ENST00000594417 ARHGEF28Q8N1W1 1705 aaKnown RBP19.84■□□□□ 0.77
ARHGEF1-208ENST00000594417 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
ARHGEF1-208ENST00000594417 KIAA1210Q9ULL0 1709 aa19.83■□□□□ 0.77
ARHGEF1-208ENST00000594417 FAM98CQ17RN3 349 aaKnown RBP19.83■□□□□ 0.77
ARHGEF1-208ENST00000594417 KRT27Q7Z3Y8 459 aa19.83■□□□□ 0.77
ARHGEF1-208ENST00000594417 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
ARHGEF1-208ENST00000594417 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
ARHGEF1-208ENST00000594417 CHRNA2Q15822 529 aa19.82■□□□□ 0.76
ARHGEF1-208ENST00000594417 PPIP5K1Q6PFW1 1433 aa19.82■□□□□ 0.76
ARHGEF1-208ENST00000594417 EVA1CP58658 441 aa19.81■□□□□ 0.76
ARHGEF1-208ENST00000594417 NLRP13Q86W25 1043 aa19.81■□□□□ 0.76
ARHGEF1-208ENST00000594417 KIAA0232Q92628 1395 aa19.81■□□□□ 0.76
ARHGEF1-208ENST00000594417 TRIM26Q12899 539 aaPredicted RBP19.8■□□□□ 0.76
ARHGEF1-208ENST00000594417 STRN4Q9NRL3 753 aa19.8■□□□□ 0.76
ARHGEF1-208ENST00000594417 GLI3P10071 1580 aa19.79■□□□□ 0.76
ARHGEF1-208ENST00000594417 TRPM3Q9HCF6 1732 aaPredicted RBP19.79■□□□□ 0.76
ARHGEF1-208ENST00000594417 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
ARHGEF1-208ENST00000594417 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
ARHGEF1-208ENST00000594417 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
ARHGEF1-208ENST00000594417 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.76
ARHGEF1-208ENST00000594417 TONSLQ96HA7 1378 aa19.77■□□□□ 0.76
ARHGEF1-208ENST00000594417 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.76■□□□□ 0.75
ARHGEF1-208ENST00000594417 NLRP6P59044 892 aa19.76■□□□□ 0.75
ARHGEF1-208ENST00000594417 ALS2Q96Q42 1657 aa19.75■□□□□ 0.75
ARHGEF1-208ENST00000594417 BRD4O60885 1362 aaPredicted RBP19.75■□□□□ 0.75
ARHGEF1-208ENST00000594417 GCP02774 474 aa19.75■□□□□ 0.75
ARHGEF1-208ENST00000594417 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
ARHGEF1-208ENST00000594417 ITSN1Q15811 1721 aa19.74■□□□□ 0.75
ARHGEF1-208ENST00000594417 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
ARHGEF1-208ENST00000594417 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
ARHGEF1-208ENST00000594417 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
ARHGEF1-208ENST00000594417 NWD2Q9ULI1 1742 aa19.72■□□□□ 0.75
ARHGEF1-208ENST00000594417 COL14A1Q05707 1796 aaKnown RBP19.72■□□□□ 0.75
ARHGEF1-208ENST00000594417 USP19O94966 1318 aa19.72■□□□□ 0.75
ARHGEF1-208ENST00000594417 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
ARHGEF1-208ENST00000594417 PLCH1Q4KWH8 1693 aa19.71■□□□□ 0.75
ARHGEF1-208ENST00000594417 DEFB132Q7Z7B7 95 aa19.71■□□□□ 0.75
ARHGEF1-208ENST00000594417 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
ARHGEF1-208ENST00000594417 USP6P35125 1406 aa19.69■□□□□ 0.74
ARHGEF1-208ENST00000594417 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
ARHGEF1-208ENST00000594417 CPDO75976 1380 aa19.69■□□□□ 0.74
ARHGEF1-208ENST00000594417 LARP1Q6PKG0 1096 aaKnown RBP19.68■□□□□ 0.74
ARHGEF1-208ENST00000594417 TRPM1Q7Z4N2 1603 aa19.67■□□□□ 0.74
ARHGEF1-208ENST00000594417 BAG6P46379 1132 aa19.67■□□□□ 0.74
ARHGEF1-208ENST00000594417 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
ARHGEF1-208ENST00000594417 TOPAZ1Q8N9V7 1692 aa19.67■□□□□ 0.74
ARHGEF1-208ENST00000594417 TTC21BQ7Z4L5 1316 aa19.67■□□□□ 0.74
ARHGEF1-208ENST00000594417 QRICH2Q9H0J4 1663 aa19.66■□□□□ 0.74
ARHGEF1-208ENST00000594417 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
ARHGEF1-208ENST00000594417 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
ARHGEF1-208ENST00000594417 BARGINQ6ZT62 677 aa19.65■□□□□ 0.74
ARHGEF1-208ENST00000594417 SOX12O15370 315 aa19.64■□□□□ 0.73
ARHGEF1-208ENST00000594417 KCNH5Q8NCM2 988 aa19.64■□□□□ 0.73
ARHGEF1-208ENST00000594417 SSH2Q76I76 1423 aa19.64■□□□□ 0.73
ARHGEF1-208ENST00000594417 KTN1Q86UP2 1357 aaKnown RBP19.63■□□□□ 0.73
ARHGEF1-208ENST00000594417 TTC21AQ8NDW8 1320 aa19.63■□□□□ 0.73
ARHGEF1-208ENST00000594417 FAM196AQ6ZSG2 479 aa19.63■□□□□ 0.73
ARHGEF1-208ENST00000594417 EP400Q96L91 3159 aa19.63■□□□□ 0.73
ARHGEF1-208ENST00000594417 HDGFL2Q7Z4V5 671 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF1-208ENST00000594417 THRAP3Q9Y2W1 955 aaKnown RBP19.62■□□□□ 0.73
ARHGEF1-208ENST00000594417 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
ARHGEF1-208ENST00000594417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.73
ARHGEF1-208ENST00000594417 AATKQ6ZMQ8 1374 aa19.6■□□□□ 0.73
ARHGEF1-208ENST00000594417 SBNO2Q9Y2G9 1366 aa19.6■□□□□ 0.73
ARHGEF1-208ENST00000594417 CAMTA1Q9Y6Y1 1673 aa19.6■□□□□ 0.73
ARHGEF1-208ENST00000594417 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
ARHGEF1-208ENST00000594417 CRYBG1Q9Y4K1 1723 aa19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 SLC24A1O60721 1099 aa19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 TRIM37O94972 964 aa19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 EN1Q05925 392 aaPredicted RBP19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 TERF2IPQ9NYB0 399 aa19.59■□□□□ 0.73
ARHGEF1-208ENST00000594417 NRKQ7Z2Y5 1582 aa19.58■□□□□ 0.73
ARHGEF1-208ENST00000594417 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.72
ARHGEF1-208ENST00000594417 ARHGEF25Q86VW2 580 aa19.58■□□□□ 0.72
ARHGEF1-208ENST00000594417 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.72
ARHGEF1-208ENST00000594417 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
ARHGEF1-208ENST00000594417 BRWD3Q6RI45 1802 aa19.57■□□□□ 0.72
ARHGEF1-208ENST00000594417 PUS7Q96PZ0 661 aaKnown RBP19.56■□□□□ 0.72
ARHGEF1-208ENST00000594417 AXIN2Q9Y2T1 843 aa19.56■□□□□ 0.72
ARHGEF1-208ENST00000594417 APBA3O96018 575 aa19.55■□□□□ 0.72
ARHGEF1-208ENST00000594417 CRB1P82279 1406 aa19.55■□□□□ 0.72
ARHGEF1-208ENST00000594417 COL5A2P05997 1499 aaPredicted RBP19.54■□□□□ 0.72
ARHGEF1-208ENST00000594417 NME9Q86XW9 330 aa19.54■□□□□ 0.72
ARHGEF1-208ENST00000594417 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
ARHGEF1-208ENST00000594417 WDR17Q8IZU2 1322 aa19.52■□□□□ 0.72
ARHGEF1-208ENST00000594417 SLIT3O75094 1523 aa19.52■□□□□ 0.72
ARHGEF1-208ENST00000594417 C11orf95C9JLR9 678 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF1-208ENST00000594417 DDB1Q16531 1140 aa19.52■□□□□ 0.72
ARHGEF1-208ENST00000594417 PSDA5PKW4 1024 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF1-208ENST00000594417 EZH2Q15910 746 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms