RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 FAM98CQ17RN3 349 aaKnown RBP27.37■■□□□ 1.97
PDE4C-205ENST00000593594 COL14A1Q05707 1796 aaKnown RBP27.35■■□□□ 1.97
PDE4C-205ENST00000593594 NGDNQ8NEJ9 315 aaKnown RBP27.35■■□□□ 1.97
PDE4C-205ENST00000593594 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
PDE4C-205ENST00000593594 PAK3O75914 559 aaPredicted RBP27.32■■□□□ 1.96
PDE4C-205ENST00000593594 BAG6P46379 1132 aa27.3■■□□□ 1.96
PDE4C-205ENST00000593594 SPATA31A5Q5VU36 1347 aa27.3■■□□□ 1.96
PDE4C-205ENST00000593594 SPATA31A7Q8IWB4 1347 aa27.3■■□□□ 1.96
PDE4C-205ENST00000593594 CRYBG1Q9Y4K1 1723 aa27.3■■□□□ 1.96
PDE4C-205ENST00000593594 PRDM11Q9NQV5 511 aa27.27■■□□□ 1.96
PDE4C-205ENST00000593594 ATP7BP35670 1465 aa27.26■■□□□ 1.95
PDE4C-205ENST00000593594 NUDT16Q96DE0 195 aaKnown RBP27.26■■□□□ 1.95
PDE4C-205ENST00000593594 ARHGEF28Q8N1W1 1705 aaKnown RBP27.26■■□□□ 1.95
PDE4C-205ENST00000593594 FAM182BQ5T319 152 aa27.25■■□□□ 1.95
PDE4C-205ENST00000593594 ITSN1Q15811 1721 aa27.24■■□□□ 1.95
PDE4C-205ENST00000593594 THSD7AQ9UPZ6 1657 aa27.22■■□□□ 1.95
PDE4C-205ENST00000593594 PSDA5PKW4 1024 aaPredicted RBP27.22■■□□□ 1.95
PDE4C-205ENST00000593594 HRCP23327 699 aa27.22■■□□□ 1.95
PDE4C-205ENST00000593594 LRP5O75197 1615 aa27.22■■□□□ 1.95
PDE4C-205ENST00000593594 KIAA0232Q92628 1395 aa27.22■■□□□ 1.95
PDE4C-205ENST00000593594 EN1Q05925 392 aaPredicted RBP27.21■■□□□ 1.95
PDE4C-205ENST00000593594 RGPD1P0DJD0 1748 aa27.2■■□□□ 1.94
PDE4C-205ENST00000593594 CDK19Q9BWU1 502 aa27.2■■□□□ 1.94
PDE4C-205ENST00000593594 CHRNA2Q15822 529 aa27.19■■□□□ 1.94
PDE4C-205ENST00000593594 SPATA31A1Q5TZJ5 1347 aa27.18■■□□□ 1.94
PDE4C-205ENST00000593594 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
PDE4C-205ENST00000593594 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
PDE4C-205ENST00000593594 POLR3AO14802 1390 aaPredicted RBP27.17■■□□□ 1.94
PDE4C-205ENST00000593594 PHRF1Q9P1Y6 1649 aaKnown RBP27.16■■□□□ 1.94
PDE4C-205ENST00000593594 STRN4Q9NRL3 753 aa27.16■■□□□ 1.94
PDE4C-205ENST00000593594 ACEP12821 1306 aa27.16■■□□□ 1.94
PDE4C-205ENST00000593594 CCDC61Q9Y6R9 512 aa27.15■■□□□ 1.94
PDE4C-205ENST00000593594 DISP2A7MBM2 1401 aa27.15■■□□□ 1.94
PDE4C-205ENST00000593594 NBPF8Q3BBV2 869 aa27.14■■□□□ 1.94
PDE4C-205ENST00000593594 TOPAZ1Q8N9V7 1692 aa27.13■■□□□ 1.93
PDE4C-205ENST00000593594 PLEKHG3A1L390 1219 aa27.12■■□□□ 1.93
PDE4C-205ENST00000593594 TNS1Q9HBL0 1735 aaKnown RBP27.12■■□□□ 1.93
PDE4C-205ENST00000593594 FAM196AQ6ZSG2 479 aa27.1■■□□□ 1.93
PDE4C-205ENST00000593594 R3HDM1Q15032 1099 aaKnown RBP27.09■■□□□ 1.93
PDE4C-205ENST00000593594 EZH2Q15910 746 aaKnown RBP27.09■■□□□ 1.93
PDE4C-205ENST00000593594 USP35Q9P2H5 1018 aa27.09■■□□□ 1.93
PDE4C-205ENST00000593594 KIAA1210Q9ULL0 1709 aa27.09■■□□□ 1.93
PDE4C-205ENST00000593594 SSH2Q76I76 1423 aa27.08■■□□□ 1.93
PDE4C-205ENST00000593594 TRIM37O94972 964 aa27.08■■□□□ 1.93
PDE4C-205ENST00000593594 EVA1CP58658 441 aa27.08■■□□□ 1.93
PDE4C-205ENST00000593594 ABTB2Q8N961 1025 aa27.08■■□□□ 1.93
PDE4C-205ENST00000593594 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
PDE4C-205ENST00000593594 NRKQ7Z2Y5 1582 aa27.06■■□□□ 1.92
PDE4C-205ENST00000593594 BARGINQ6ZT62 677 aa27.06■■□□□ 1.92
PDE4C-205ENST00000593594 CAMKK2Q96RR4 588 aa27.06■■□□□ 1.92
PDE4C-205ENST00000593594 CAMTA1Q9Y6Y1 1673 aa27.05■■□□□ 1.92
PDE4C-205ENST00000593594 LARP1Q6PKG0 1096 aaKnown RBP27.04■■□□□ 1.92
PDE4C-205ENST00000593594 USP19O94966 1318 aa27.04■■□□□ 1.92
PDE4C-205ENST00000593594 CPDO75976 1380 aa27.04■■□□□ 1.92
PDE4C-205ENST00000593594 APBA3O96018 575 aa27.02■■□□□ 1.92
PDE4C-205ENST00000593594 SRPK2P78362 688 aaKnown RBP27.02■■□□□ 1.92
PDE4C-205ENST00000593594 PDE3BQ13370 1112 aa27.02■■□□□ 1.92
PDE4C-205ENST00000593594 PPIP5K1Q6PFW1 1433 aa27.01■■□□□ 1.91
PDE4C-205ENST00000593594 NLRP13Q86W25 1043 aa27.01■■□□□ 1.91
PDE4C-205ENST00000593594 TCP11L2Q8N4U5 519 aa27.01■■□□□ 1.91
PDE4C-205ENST00000593594 LMO7Q8WWI1 1683 aa27.01■■□□□ 1.91
PDE4C-205ENST00000593594 PARD3Q8TEW0 1356 aa26.99■■□□□ 1.91
PDE4C-205ENST00000593594 CENPJQ9HC77 1338 aaPredicted RBP26.99■■□□□ 1.91
PDE4C-205ENST00000593594 GCP02774 474 aa26.99■■□□□ 1.91
PDE4C-205ENST00000593594 CABP2Q9NPB3 220 aa26.99■■□□□ 1.91
PDE4C-205ENST00000593594 THRAP3Q9Y2W1 955 aaKnown RBP26.96■■□□□ 1.91
PDE4C-205ENST00000593594 BRD4O60885 1362 aaPredicted RBP26.95■■□□□ 1.9
PDE4C-205ENST00000593594 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
PDE4C-205ENST00000593594 CABP1Q9NZU7 370 aa26.91■■□□□ 1.9
PDE4C-205ENST00000593594 RREB1Q92766 1687 aa26.91■■□□□ 1.9
PDE4C-205ENST00000593594 QRICH2Q9H0J4 1663 aa26.9■■□□□ 1.9
PDE4C-205ENST00000593594 NLRP6P59044 892 aa26.9■■□□□ 1.9
PDE4C-205ENST00000593594 USP6P35125 1406 aa26.9■■□□□ 1.9
PDE4C-205ENST00000593594 CRB1P82279 1406 aa26.89■■□□□ 1.89
PDE4C-205ENST00000593594 NUP188Q5SRE5 1749 aa26.88■■□□□ 1.89
PDE4C-205ENST00000593594 PARP4Q9UKK3 1724 aaKnown RBP26.88■■□□□ 1.89
PDE4C-205ENST00000593594 ZBTB7CA1YPR0 619 aa26.88■■□□□ 1.89
PDE4C-205ENST00000593594 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
PDE4C-205ENST00000593594 NBPF14Q5TI25 921 aa26.87■■□□□ 1.89
PDE4C-205ENST00000593594 SLIT3O75094 1523 aa26.85■■□□□ 1.89
PDE4C-205ENST00000593594 C11orf95C9JLR9 678 aaPredicted RBP26.85■■□□□ 1.89
PDE4C-205ENST00000593594 L3MBTL2Q969R5 705 aa26.83■■□□□ 1.89
PDE4C-205ENST00000593594 EVC2Q86UK5 1308 aa26.82■■□□□ 1.88
PDE4C-205ENST00000593594 OVOS2A0A0G2JMS6 1433 aa26.82■■□□□ 1.88
PDE4C-205ENST00000593594 OVOS2A0A0J9YW53 1432 aa26.82■■□□□ 1.88
PDE4C-205ENST00000593594 OVOS2Q6IE36 1432 aa26.82■■□□□ 1.88
PDE4C-205ENST00000593594 TOM1L2Q6ZVM7 507 aa26.81■■□□□ 1.88
PDE4C-205ENST00000593594 PIK3C2AO00443 1686 aa26.8■■□□□ 1.88
PDE4C-205ENST00000593594 PEAK1Q9H792 1746 aa26.8■■□□□ 1.88
PDE4C-205ENST00000593594 DDB1Q16531 1140 aa26.79■■□□□ 1.88
PDE4C-205ENST00000593594 AXIN2Q9Y2T1 843 aa26.79■■□□□ 1.88
PDE4C-205ENST00000593594 COL18A1P39060 1754 aa26.79■■□□□ 1.88
PDE4C-205ENST00000593594 LRRC37A3O60309 1634 aa26.78■■□□□ 1.88
PDE4C-205ENST00000593594 WDR17Q8IZU2 1322 aa26.77■■□□□ 1.88
PDE4C-205ENST00000593594 PLSCR1O15162 318 aa26.76■■□□□ 1.87
PDE4C-205ENST00000593594 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
PDE4C-205ENST00000593594 TTC21BQ7Z4L5 1316 aa26.75■■□□□ 1.87
PDE4C-205ENST00000593594 ZNF692Q9BU19 519 aaPredicted RBP26.75■■□□□ 1.87
PDE4C-205ENST00000593594 TRPM1Q7Z4N2 1603 aa26.75■■□□□ 1.87
PDE4C-205ENST00000593594 SBF2Q86WG5 1849 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms