RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ITSN1Q15811 1721 aa14.74□□□□□ -0.05
VMP1-214ENST00000592106 ARHGEF28Q8N1W1 1705 aaKnown RBP14.74□□□□□ -0.05
VMP1-214ENST00000592106 NWD2Q9ULI1 1742 aa14.74□□□□□ -0.05
VMP1-214ENST00000592106 WASLO00401 505 aaPredicted RBP14.73□□□□□ -0.05
VMP1-214ENST00000592106 RALGAPBQ86X10 1494 aa14.73□□□□□ -0.05
VMP1-214ENST00000592106 PLCH1Q4KWH8 1693 aa14.73□□□□□ -0.05
VMP1-214ENST00000592106 TRPM3Q9HCF6 1732 aaPredicted RBP14.72□□□□□ -0.05
VMP1-214ENST00000592106 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
VMP1-214ENST00000592106 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
VMP1-214ENST00000592106 CCDC125Q86Z20 511 aa14.71□□□□□ -0.05
VMP1-214ENST00000592106 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.05
VMP1-214ENST00000592106 GLI3P10071 1580 aa14.71□□□□□ -0.05
VMP1-214ENST00000592106 VPS72Q15906 364 aa14.7□□□□□ -0.06
VMP1-214ENST00000592106 CABLES1Q8TDN4 633 aa14.7□□□□□ -0.06
VMP1-214ENST00000592106 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
VMP1-214ENST00000592106 PRR36Q9H6K5 1346 aa14.69□□□□□ -0.06
VMP1-214ENST00000592106 ALS2Q96Q42 1657 aa14.69□□□□□ -0.06
VMP1-214ENST00000592106 ATP7BP35670 1465 aa14.69□□□□□ -0.06
VMP1-214ENST00000592106 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
VMP1-214ENST00000592106 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
VMP1-214ENST00000592106 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
VMP1-214ENST00000592106 SF3B2Q13435 895 aaKnown RBP14.66□□□□□ -0.06
VMP1-214ENST00000592106 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
VMP1-214ENST00000592106 A0A0G2JS52 829 aa14.65□□□□□ -0.06
VMP1-214ENST00000592106 MYT1Q01538 1121 aa14.65□□□□□ -0.06
VMP1-214ENST00000592106 NUDT16Q96DE0 195 aaKnown RBP14.65□□□□□ -0.06
VMP1-214ENST00000592106 NRAPQ86VF7 1730 aa14.64□□□□□ -0.07
VMP1-214ENST00000592106 SEPT12Q8IYM1 358 aa14.64□□□□□ -0.07
VMP1-214ENST00000592106 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
VMP1-214ENST00000592106 TOPAZ1Q8N9V7 1692 aa14.64□□□□□ -0.07
VMP1-214ENST00000592106 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
VMP1-214ENST00000592106 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
VMP1-214ENST00000592106 FAM83GA6ND36 823 aa14.62□□□□□ -0.07
VMP1-214ENST00000592106 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
VMP1-214ENST00000592106 CRYBG1Q9Y4K1 1723 aa14.62□□□□□ -0.07
VMP1-214ENST00000592106 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
VMP1-214ENST00000592106 BRWD3Q6RI45 1802 aa14.62□□□□□ -0.07
VMP1-214ENST00000592106 KRT27Q7Z3Y8 459 aa14.61□□□□□ -0.07
VMP1-214ENST00000592106 PHRF1Q9P1Y6 1649 aaKnown RBP14.61□□□□□ -0.07
VMP1-214ENST00000592106 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
VMP1-214ENST00000592106 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
VMP1-214ENST00000592106 ONECUT3O60422 494 aaPredicted RBP14.6□□□□□ -0.07
VMP1-214ENST00000592106 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
VMP1-214ENST00000592106 ACEP12821 1306 aa14.59□□□□□ -0.07
VMP1-214ENST00000592106 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
VMP1-214ENST00000592106 FAM98CQ17RN3 349 aaKnown RBP14.58□□□□□ -0.08
VMP1-214ENST00000592106 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
VMP1-214ENST00000592106 BRD4O60885 1362 aaPredicted RBP14.58□□□□□ -0.08
VMP1-214ENST00000592106 DSG3P32926 999 aa14.57□□□□□ -0.08
VMP1-214ENST00000592106 NBPF1Q3BBV0 1214 aa14.57□□□□□ -0.08
VMP1-214ENST00000592106 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
VMP1-214ENST00000592106 PPIP5K1Q6PFW1 1433 aa14.57□□□□□ -0.08
VMP1-214ENST00000592106 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
VMP1-214ENST00000592106 SPATA31A5Q5VU36 1347 aa14.56□□□□□ -0.08
VMP1-214ENST00000592106 SPATA31A7Q8IWB4 1347 aa14.56□□□□□ -0.08
VMP1-214ENST00000592106 BAG6P46379 1132 aa14.55□□□□□ -0.08
VMP1-214ENST00000592106 ABTB2Q8N961 1025 aa14.55□□□□□ -0.08
VMP1-214ENST00000592106 NRKQ7Z2Y5 1582 aa14.55□□□□□ -0.08
VMP1-214ENST00000592106 NLRP13Q86W25 1043 aa14.54□□□□□ -0.08
VMP1-214ENST00000592106 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
VMP1-214ENST00000592106 RGPD1P0DJD0 1748 aa14.53□□□□□ -0.08
VMP1-214ENST00000592106 TRPM1Q7Z4N2 1603 aa14.53□□□□□ -0.08
VMP1-214ENST00000592106 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
VMP1-214ENST00000592106 L3MBTL2Q969R5 705 aa14.53□□□□□ -0.08
VMP1-214ENST00000592106 STRN4Q9NRL3 753 aa14.53□□□□□ -0.08
VMP1-214ENST00000592106 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.08
VMP1-214ENST00000592106 CPDO75976 1380 aa14.52□□□□□ -0.08
VMP1-214ENST00000592106 USP19O94966 1318 aa14.52□□□□□ -0.08
VMP1-214ENST00000592106 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
VMP1-214ENST00000592106 EVA1CP58658 441 aa14.52□□□□□ -0.09
VMP1-214ENST00000592106 ZC3H6P61129 1189 aaKnown RBP14.52□□□□□ -0.09
VMP1-214ENST00000592106 CHRNA2Q15822 529 aa14.52□□□□□ -0.09
VMP1-214ENST00000592106 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.09
VMP1-214ENST00000592106 CABP2Q9NPB3 220 aa14.52□□□□□ -0.09
VMP1-214ENST00000592106 SPATA31A1Q5TZJ5 1347 aa14.51□□□□□ -0.09
VMP1-214ENST00000592106 USP6P35125 1406 aa14.5□□□□□ -0.09
VMP1-214ENST00000592106 SSH2Q76I76 1423 aa14.5□□□□□ -0.09
VMP1-214ENST00000592106 NEUROD1Q13562 356 aa14.49□□□□□ -0.09
VMP1-214ENST00000592106 POLA2Q14181 598 aa14.48□□□□□ -0.09
VMP1-214ENST00000592106 SIN3AQ96ST3 1273 aa14.48□□□□□ -0.09
VMP1-214ENST00000592106 LMO7Q8WWI1 1683 aa14.48□□□□□ -0.09
VMP1-214ENST00000592106 GCP02774 474 aa14.47□□□□□ -0.09
VMP1-214ENST00000592106 BARGINQ6ZT62 677 aa14.47□□□□□ -0.09
VMP1-214ENST00000592106 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
VMP1-214ENST00000592106 NLRP6P59044 892 aa14.46□□□□□ -0.09
VMP1-214ENST00000592106 FAM196AQ6ZSG2 479 aa14.46□□□□□ -0.09
VMP1-214ENST00000592106 USP35Q9P2H5 1018 aa14.46□□□□□ -0.09
VMP1-214ENST00000592106 THRAP3Q9Y2W1 955 aaKnown RBP14.46□□□□□ -0.09
VMP1-214ENST00000592106 DISP2A7MBM2 1401 aa14.46□□□□□ -0.09
VMP1-214ENST00000592106 EP400Q96L91 3159 aa14.46□□□□□ -0.1
VMP1-214ENST00000592106 SLIT3O75094 1523 aa14.46□□□□□ -0.1
VMP1-214ENST00000592106 CAMTA1Q9Y6Y1 1673 aa14.46□□□□□ -0.1
VMP1-214ENST00000592106 ABCB7O75027 752 aa14.45□□□□□ -0.1
VMP1-214ENST00000592106 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
VMP1-214ENST00000592106 TCP11L2Q8N4U5 519 aa14.45□□□□□ -0.1
VMP1-214ENST00000592106 TNS1Q9HBL0 1735 aaKnown RBP14.45□□□□□ -0.1
VMP1-214ENST00000592106 COL5A2P05997 1499 aaPredicted RBP14.44□□□□□ -0.1
VMP1-214ENST00000592106 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
VMP1-214ENST00000592106 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
VMP1-214ENST00000592106 TTC21AQ8NDW8 1320 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms