RNA–Protein interactions for RNA: ENST00000591190.5

CXXC1-215, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-215ENST00000591190 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
CXXC1-215ENST00000591190 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
CXXC1-215ENST00000591190 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
CXXC1-215ENST00000591190 HAP1P54257 671 aaPredicted RBP22.6■■□□□ 1.21
CXXC1-215ENST00000591190 CCDC61Q9Y6R9 512 aa22.59■■□□□ 1.21
CXXC1-215ENST00000591190 PLEKHG5O94827 1062 aa22.57■■□□□ 1.2
CXXC1-215ENST00000591190 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
CXXC1-215ENST00000591190 ACEP12821 1306 aa22.57■■□□□ 1.2
CXXC1-215ENST00000591190 NRKQ7Z2Y5 1582 aa22.56■■□□□ 1.2
CXXC1-215ENST00000591190 PLEKHG3A1L390 1219 aa22.56■■□□□ 1.2
CXXC1-215ENST00000591190 AKAP12Q02952 1782 aa22.54■■□□□ 1.2
CXXC1-215ENST00000591190 PAK3O75914 559 aaPredicted RBP22.54■■□□□ 1.2
CXXC1-215ENST00000591190 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
CXXC1-215ENST00000591190 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
CXXC1-215ENST00000591190 SBNO2Q9Y2G9 1366 aa22.53■■□□□ 1.2
CXXC1-215ENST00000591190 EVC2Q86UK5 1308 aa22.52■■□□□ 1.2
CXXC1-215ENST00000591190 UPF1Q92900 1129 aaKnown RBP eCLIP22.51■■□□□ 1.19
CXXC1-215ENST00000591190 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
CXXC1-215ENST00000591190 EP400Q96L91 3159 aa22.51■■□□□ 1.19
CXXC1-215ENST00000591190 USP6P35125 1406 aa22.5■■□□□ 1.19
CXXC1-215ENST00000591190 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
CXXC1-215ENST00000591190 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
CXXC1-215ENST00000591190 CARD11Q9BXL7 1154 aa22.48■■□□□ 1.19
CXXC1-215ENST00000591190 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
CXXC1-215ENST00000591190 FAM83GA6ND36 823 aa22.47■■□□□ 1.19
CXXC1-215ENST00000591190 MON2Q7Z3U7 1717 aa22.47■■□□□ 1.19
CXXC1-215ENST00000591190 ATAD2Q6PL18 1390 aa22.47■■□□□ 1.19
CXXC1-215ENST00000591190 VPS72Q15906 364 aa22.46■■□□□ 1.19
CXXC1-215ENST00000591190 LMO7Q8WWI1 1683 aa22.46■■□□□ 1.19
CXXC1-215ENST00000591190 USP19O94966 1318 aa22.45■■□□□ 1.18
CXXC1-215ENST00000591190 SLIT3O75094 1523 aa22.44■■□□□ 1.18
CXXC1-215ENST00000591190 SSH2Q76I76 1423 aa22.44■■□□□ 1.18
CXXC1-215ENST00000591190 KIAA0232Q92628 1395 aa22.44■■□□□ 1.18
CXXC1-215ENST00000591190 CABP1Q9NZU7 370 aa22.44■■□□□ 1.18
CXXC1-215ENST00000591190 NUTM2GQ5VZR2 741 aa22.43■■□□□ 1.18
CXXC1-215ENST00000591190 PRDM11Q9NQV5 511 aa22.42■■□□□ 1.18
CXXC1-215ENST00000591190 BTG4Q9NY30 223 aa22.42■■□□□ 1.18
CXXC1-215ENST00000591190 ABTB2Q8N961 1025 aa22.41■■□□□ 1.18
CXXC1-215ENST00000591190 THSD7AQ9UPZ6 1657 aa22.41■■□□□ 1.18
CXXC1-215ENST00000591190 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
CXXC1-215ENST00000591190 CPDO75976 1380 aa22.39■■□□□ 1.18
CXXC1-215ENST00000591190 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
CXXC1-215ENST00000591190 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
CXXC1-215ENST00000591190 CD163L1Q9NR16 1453 aa22.37■■□□□ 1.17
CXXC1-215ENST00000591190 ZC3H6P61129 1189 aaKnown RBP22.36■■□□□ 1.17
CXXC1-215ENST00000591190 CHRNA2Q15822 529 aa22.36■■□□□ 1.17
CXXC1-215ENST00000591190 CAMTA1Q9Y6Y1 1673 aa22.36■■□□□ 1.17
CXXC1-215ENST00000591190 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
CXXC1-215ENST00000591190 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
CXXC1-215ENST00000591190 ONECUT3O60422 494 aaPredicted RBP22.34■■□□□ 1.17
CXXC1-215ENST00000591190 SEPT12Q8IYM1 358 aa22.34■■□□□ 1.17
CXXC1-215ENST00000591190 SPATA31A5Q5VU36 1347 aa22.33■■□□□ 1.17
CXXC1-215ENST00000591190 SPATA31A7Q8IWB4 1347 aa22.33■■□□□ 1.17
CXXC1-215ENST00000591190 KTN1Q86UP2 1357 aaKnown RBP22.32■■□□□ 1.16
CXXC1-215ENST00000591190 COL18A1P39060 1754 aa22.32■■□□□ 1.16
CXXC1-215ENST00000591190 TTC21BQ7Z4L5 1316 aa22.31■■□□□ 1.16
CXXC1-215ENST00000591190 GCP02774 474 aa22.31■■□□□ 1.16
CXXC1-215ENST00000591190 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
CXXC1-215ENST00000591190 NFAT5O94916 1531 aa22.31■■□□□ 1.16
CXXC1-215ENST00000591190 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
CXXC1-215ENST00000591190 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
CXXC1-215ENST00000591190 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
CXXC1-215ENST00000591190 TESK2Q96S53 571 aa22.3■■□□□ 1.16
CXXC1-215ENST00000591190 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
CXXC1-215ENST00000591190 USP47Q96K76 1375 aa22.29■■□□□ 1.16
CXXC1-215ENST00000591190 NLRP6P59044 892 aa22.29■■□□□ 1.16
CXXC1-215ENST00000591190 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
CXXC1-215ENST00000591190 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.16
CXXC1-215ENST00000591190 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
CXXC1-215ENST00000591190 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
CXXC1-215ENST00000591190 STRN4Q9NRL3 753 aa22.27■■□□□ 1.16
CXXC1-215ENST00000591190 A0A1W2PP64 1363 aa22.26■■□□□ 1.15
CXXC1-215ENST00000591190 EDC4Q6P2E9 1401 aaKnown RBP22.26■■□□□ 1.15
CXXC1-215ENST00000591190 A0A0G2JS52 829 aa22.26■■□□□ 1.15
CXXC1-215ENST00000591190 MYT1Q01538 1121 aa22.26■■□□□ 1.15
CXXC1-215ENST00000591190 PUS7Q96PZ0 661 aaKnown RBP22.26■■□□□ 1.15
CXXC1-215ENST00000591190 ABCC6O95255 1503 aa22.26■■□□□ 1.15
CXXC1-215ENST00000591190 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
CXXC1-215ENST00000591190 KRT27Q7Z3Y8 459 aa22.25■■□□□ 1.15
CXXC1-215ENST00000591190 TIMELESSQ9UNS1 1208 aa22.25■■□□□ 1.15
CXXC1-215ENST00000591190 PARP4Q9UKK3 1724 aaKnown RBP22.25■■□□□ 1.15
CXXC1-215ENST00000591190 RGPD5Q99666 1765 aa22.25■■□□□ 1.15
CXXC1-215ENST00000591190 AATKQ6ZMQ8 1374 aa22.25■■□□□ 1.15
CXXC1-215ENST00000591190 RGPD1P0DJD0 1748 aa22.24■■□□□ 1.15
CXXC1-215ENST00000591190 LTN1O94822 1766 aa22.23■■□□□ 1.15
CXXC1-215ENST00000591190 USP31Q70CQ4 1352 aa22.23■■□□□ 1.15
CXXC1-215ENST00000591190 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
CXXC1-215ENST00000591190 CCDC125Q86Z20 511 aa22.22■■□□□ 1.15
CXXC1-215ENST00000591190 TMC1Q8TDI8 760 aa22.22■■□□□ 1.15
CXXC1-215ENST00000591190 MYOM1P52179 1685 aa22.22■■□□□ 1.15
CXXC1-215ENST00000591190 LARP1Q6PKG0 1096 aaKnown RBP22.21■■□□□ 1.15
CXXC1-215ENST00000591190 HDGFL2Q7Z4V5 671 aaPredicted RBP22.21■■□□□ 1.15
CXXC1-215ENST00000591190 SLC12A5Q9H2X9 1139 aa22.21■■□□□ 1.15
CXXC1-215ENST00000591190 CRB1P82279 1406 aa22.21■■□□□ 1.15
CXXC1-215ENST00000591190 OVOS2A0A0J9YW53 1432 aa22.2■■□□□ 1.14
CXXC1-215ENST00000591190 OVOS2Q6IE36 1432 aa22.2■■□□□ 1.14
CXXC1-215ENST00000591190 LRRC37A3O60309 1634 aa22.2■■□□□ 1.14
CXXC1-215ENST00000591190 ZBTB7CA1YPR0 619 aa22.19■■□□□ 1.14
CXXC1-215ENST00000591190 SLC24A1O60721 1099 aa22.19■■□□□ 1.14
CXXC1-215ENST00000591190 EVA1CP58658 441 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms