RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 PRR36Q9H6K5 1346 aa22.29■■□□□ 1.16
GHDC-211ENST00000590520 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
GHDC-211ENST00000590520 TNS1Q9HBL0 1735 aaKnown RBP22.28■■□□□ 1.16
GHDC-211ENST00000590520 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
GHDC-211ENST00000590520 TRAK1Q9UPV9 953 aa22.27■■□□□ 1.16
GHDC-211ENST00000590520 PHRF1Q9P1Y6 1649 aaKnown RBP22.27■■□□□ 1.16
GHDC-211ENST00000590520 MINK1Q8N4C8 1332 aaPredicted RBP22.27■■□□□ 1.16
GHDC-211ENST00000590520 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
GHDC-211ENST00000590520 DISP2A7MBM2 1401 aa22.24■■□□□ 1.15
GHDC-211ENST00000590520 ATP7BP35670 1465 aa22.24■■□□□ 1.15
GHDC-211ENST00000590520 SPATA31A5Q5VU36 1347 aa22.24■■□□□ 1.15
GHDC-211ENST00000590520 SPATA31A7Q8IWB4 1347 aa22.24■■□□□ 1.15
GHDC-211ENST00000590520 WASLO00401 505 aaPredicted RBP22.23■■□□□ 1.15
GHDC-211ENST00000590520 PSDA5PKW4 1024 aaPredicted RBP22.22■■□□□ 1.15
GHDC-211ENST00000590520 TOPAZ1Q8N9V7 1692 aa22.21■■□□□ 1.15
GHDC-211ENST00000590520 NGDNQ8NEJ9 315 aaKnown RBP22.21■■□□□ 1.15
GHDC-211ENST00000590520 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
GHDC-211ENST00000590520 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
GHDC-211ENST00000590520 HRCP23327 699 aa22.19■■□□□ 1.14
GHDC-211ENST00000590520 KIAA0232Q92628 1395 aa22.17■■□□□ 1.14
GHDC-211ENST00000590520 EN1Q05925 392 aaPredicted RBP22.17■■□□□ 1.14
GHDC-211ENST00000590520 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
GHDC-211ENST00000590520 STAC3Q96MF2 364 aa22.17■■□□□ 1.14
GHDC-211ENST00000590520 KDM2AQ9Y2K7 1162 aa22.17■■□□□ 1.14
GHDC-211ENST00000590520 SPATA31A1Q5TZJ5 1347 aa22.15■■□□□ 1.14
GHDC-211ENST00000590520 FAM182BQ5T319 152 aa22.15■■□□□ 1.14
GHDC-211ENST00000590520 NRKQ7Z2Y5 1582 aa22.15■■□□□ 1.14
GHDC-211ENST00000590520 KIAA1210Q9ULL0 1709 aa22.12■■□□□ 1.13
GHDC-211ENST00000590520 RREB1Q92766 1687 aa22.12■■□□□ 1.13
GHDC-211ENST00000590520 NUDT16Q96DE0 195 aaKnown RBP22.12■■□□□ 1.13
GHDC-211ENST00000590520 R3HDM1Q15032 1099 aaKnown RBP22.11■■□□□ 1.13
GHDC-211ENST00000590520 POLR3AO14802 1390 aaPredicted RBP22.11■■□□□ 1.13
GHDC-211ENST00000590520 PARD3Q8TEW0 1356 aa22.11■■□□□ 1.13
GHDC-211ENST00000590520 CHRNA2Q15822 529 aa22.1■■□□□ 1.13
GHDC-211ENST00000590520 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
GHDC-211ENST00000590520 LMO7Q8WWI1 1683 aa22.1■■□□□ 1.13
GHDC-211ENST00000590520 SSH2Q76I76 1423 aa22.09■■□□□ 1.13
GHDC-211ENST00000590520 FAM196AQ6ZSG2 479 aa22.09■■□□□ 1.13
GHDC-211ENST00000590520 NUP188Q5SRE5 1749 aa22.09■■□□□ 1.13
GHDC-211ENST00000590520 EZH2Q15910 746 aaKnown RBP22.07■■□□□ 1.12
GHDC-211ENST00000590520 TRIM37O94972 964 aa22.06■■□□□ 1.12
GHDC-211ENST00000590520 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
GHDC-211ENST00000590520 CPDO75976 1380 aa22.05■■□□□ 1.12
GHDC-211ENST00000590520 CAMKK2Q96RR4 588 aa22.05■■□□□ 1.12
GHDC-211ENST00000590520 CDK19Q9BWU1 502 aa22.05■■□□□ 1.12
GHDC-211ENST00000590520 PARP4Q9UKK3 1724 aaKnown RBP22.05■■□□□ 1.12
GHDC-211ENST00000590520 ACEP12821 1306 aa22.05■■□□□ 1.12
GHDC-211ENST00000590520 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
GHDC-211ENST00000590520 NUTM2GQ5VZR2 741 aa22.04■■□□□ 1.12
GHDC-211ENST00000590520 BARGINQ6ZT62 677 aa22.04■■□□□ 1.12
GHDC-211ENST00000590520 CCDC61Q9Y6R9 512 aa22.03■■□□□ 1.12
GHDC-211ENST00000590520 USP19O94966 1318 aa22.03■■□□□ 1.12
GHDC-211ENST00000590520 USP35Q9P2H5 1018 aa22.02■■□□□ 1.12
GHDC-211ENST00000590520 PLEKHG3A1L390 1219 aa22.01■■□□□ 1.11
GHDC-211ENST00000590520 APBA3O96018 575 aa22.01■■□□□ 1.11
GHDC-211ENST00000590520 EVA1CP58658 441 aa22.01■■□□□ 1.11
GHDC-211ENST00000590520 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
GHDC-211ENST00000590520 NBPF8Q3BBV2 869 aa22.01■■□□□ 1.11
GHDC-211ENST00000590520 TCP11L2Q8N4U5 519 aa21.99■■□□□ 1.11
GHDC-211ENST00000590520 ABTB2Q8N961 1025 aa21.99■■□□□ 1.11
GHDC-211ENST00000590520 COL5A2P05997 1499 aaPredicted RBP21.98■■□□□ 1.11
GHDC-211ENST00000590520 RGPD3A6NKT7 1758 aaPredicted RBP21.98■■□□□ 1.11
GHDC-211ENST00000590520 RGPD4Q7Z3J3 1758 aa21.98■■□□□ 1.11
GHDC-211ENST00000590520 LARP1Q6PKG0 1096 aaKnown RBP21.98■■□□□ 1.11
GHDC-211ENST00000590520 QRICH2Q9H0J4 1663 aa21.98■■□□□ 1.11
GHDC-211ENST00000590520 PPIP5K1Q6PFW1 1433 aa21.97■■□□□ 1.11
GHDC-211ENST00000590520 THRAP3Q9Y2W1 955 aaKnown RBP21.97■■□□□ 1.11
GHDC-211ENST00000590520 BRD4O60885 1362 aaPredicted RBP21.96■■□□□ 1.11
GHDC-211ENST00000590520 LRRC37A3O60309 1634 aa21.95■■□□□ 1.1
GHDC-211ENST00000590520 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
GHDC-211ENST00000590520 WNK3Q9BYP7 1800 aa21.95■■□□□ 1.1
GHDC-211ENST00000590520 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
GHDC-211ENST00000590520 SLIT3O75094 1523 aa21.94■■□□□ 1.1
GHDC-211ENST00000590520 CRB1P82279 1406 aa21.93■■□□□ 1.1
GHDC-211ENST00000590520 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
GHDC-211ENST00000590520 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
GHDC-211ENST00000590520 OVOS2A0A0G2JMS6 1433 aa21.92■■□□□ 1.1
GHDC-211ENST00000590520 OVOS2A0A0J9YW53 1432 aa21.92■■□□□ 1.1
GHDC-211ENST00000590520 OVOS2Q6IE36 1432 aa21.92■■□□□ 1.1
GHDC-211ENST00000590520 CENPJQ9HC77 1338 aaPredicted RBP21.92■■□□□ 1.1
GHDC-211ENST00000590520 C11orf95C9JLR9 678 aaPredicted RBP21.92■■□□□ 1.1
GHDC-211ENST00000590520 GCP02774 474 aa21.92■■□□□ 1.1
GHDC-211ENST00000590520 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
GHDC-211ENST00000590520 USP6P35125 1406 aa21.9■■□□□ 1.1
GHDC-211ENST00000590520 PIK3C2AO00443 1686 aa21.9■■□□□ 1.1
GHDC-211ENST00000590520 AATKQ6ZMQ8 1374 aa21.88■■□□□ 1.09
GHDC-211ENST00000590520 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
GHDC-211ENST00000590520 AKAP12Q02952 1782 aa21.88■■□□□ 1.09
GHDC-211ENST00000590520 COL18A1P39060 1754 aa21.87■■□□□ 1.09
GHDC-211ENST00000590520 CABP2Q9NPB3 220 aa21.86■■□□□ 1.09
GHDC-211ENST00000590520 TRPM1Q7Z4N2 1603 aa21.84■■□□□ 1.09
GHDC-211ENST00000590520 ZBTB7CA1YPR0 619 aa21.84■■□□□ 1.09
GHDC-211ENST00000590520 NINLQ9Y2I6 1382 aa21.84■■□□□ 1.09
GHDC-211ENST00000590520 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
GHDC-211ENST00000590520 SPON1Q9HCB6 807 aa21.83■■□□□ 1.09
GHDC-211ENST00000590520 PPP1R1BQ9UD71 204 aaPredicted RBP21.83■■□□□ 1.09
GHDC-211ENST00000590520 CPSF1Q10570 1443 aaKnown RBP21.82■■□□□ 1.08
GHDC-211ENST00000590520 NLRP6P59044 892 aa21.82■■□□□ 1.08
GHDC-211ENST00000590520 KCNQ2O43526 872 aa21.81■■□□□ 1.08
GHDC-211ENST00000590520 DDB1Q16531 1140 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms