RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SMC5Q8IY18 1101 aa18.82■□□□□ 0.6
CIRBP-228ENST00000590347 TERF1P54274 439 aa18.81■□□□□ 0.6
CIRBP-228ENST00000590347 KLHL40Q2TBA0 621 aa18.81■□□□□ 0.6
CIRBP-228ENST00000590347 WWC1Q8IX03 1113 aa18.81■□□□□ 0.6
CIRBP-228ENST00000590347 UHRF1BP1LA0JNW5 1464 aa18.8■□□□□ 0.6
CIRBP-228ENST00000590347 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
CIRBP-228ENST00000590347 U2AF2P26368 475 aaKnown RBP eCLIP18.8■□□□□ 0.62e-10■□□□□ 10.9
CIRBP-228ENST00000590347 ITPRIPQ8IWB1 547 aa18.8■□□□□ 0.6
CIRBP-228ENST00000590347 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-228ENST00000590347 ADGRL1O94910 1474 aa18.78■□□□□ 0.6
CIRBP-228ENST00000590347 ZNF771Q7L3S4 317 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-228ENST00000590347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.78■□□□□ 0.6
CIRBP-228ENST00000590347 MTERF4Q7Z6M4 381 aaKnown RBP18.78■□□□□ 0.6
CIRBP-228ENST00000590347 ABCC1P33527 1531 aa18.77■□□□□ 0.6
CIRBP-228ENST00000590347 PLCB2Q00722 1185 aa18.77■□□□□ 0.6
CIRBP-228ENST00000590347 CERS3Q8IU89 383 aa18.77■□□□□ 0.6
CIRBP-228ENST00000590347 KIF2CQ99661 725 aa18.77■□□□□ 0.6
CIRBP-228ENST00000590347 A2MP01023 1474 aa18.77■□□□□ 0.59
CIRBP-228ENST00000590347 K7ELQ4 463 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-228ENST00000590347 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-228ENST00000590347 E9PCH4 1651 aa18.76■□□□□ 0.59
CIRBP-228ENST00000590347 DUOX2Q9NRD8 1548 aa18.76■□□□□ 0.59
CIRBP-228ENST00000590347 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
CIRBP-228ENST00000590347 CSPP1Q1MSJ5 1256 aa18.76■□□□□ 0.59
CIRBP-228ENST00000590347 KDM5DQ9BY66 1539 aa18.76■□□□□ 0.59
CIRBP-228ENST00000590347 GPT2Q8TD30 523 aa18.75■□□□□ 0.59
CIRBP-228ENST00000590347 TSR2Q969E8 191 aaKnown RBP18.75■□□□□ 0.59
CIRBP-228ENST00000590347 TRERF1Q96PN7 1200 aa18.75■□□□□ 0.59
CIRBP-228ENST00000590347 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
CIRBP-228ENST00000590347 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
CIRBP-228ENST00000590347 PDLIM2Q96JY6 352 aa18.74■□□□□ 0.59
CIRBP-228ENST00000590347 TMEM63CQ9P1W3 806 aa18.74■□□□□ 0.59
CIRBP-228ENST00000590347 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
CIRBP-228ENST00000590347 LMBRD1Q9NUN5 540 aa18.74■□□□□ 0.59
CIRBP-228ENST00000590347 MAGI2Q86UL8 1455 aa18.73■□□□□ 0.59
CIRBP-228ENST00000590347 MYRIPQ8NFW9 859 aa18.73■□□□□ 0.59
CIRBP-228ENST00000590347 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-228ENST00000590347 KIAA2012Q0VF49 1180 aa18.72■□□□□ 0.59
CIRBP-228ENST00000590347 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
CIRBP-228ENST00000590347 MVPQ14764 893 aaKnown RBP18.72■□□□□ 0.59
CIRBP-228ENST00000590347 NCOA3Q9Y6Q9 1424 aa18.72■□□□□ 0.59
CIRBP-228ENST00000590347 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
CIRBP-228ENST00000590347 ZNF445P59923 1031 aa18.71■□□□□ 0.59
CIRBP-228ENST00000590347 ZBTB9Q96C00 473 aa18.71■□□□□ 0.59
CIRBP-228ENST00000590347 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
CIRBP-228ENST00000590347 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
CIRBP-228ENST00000590347 SNX21Q969T3 373 aa18.7■□□□□ 0.58
CIRBP-228ENST00000590347 CFAP70Q5T0N1 1121 aa18.7■□□□□ 0.58
CIRBP-228ENST00000590347 CD109Q6YHK3 1445 aa18.7■□□□□ 0.58
CIRBP-228ENST00000590347 RBM25P49756 843 aaKnown RBP18.69■□□□□ 0.58
CIRBP-228ENST00000590347 PDCL2Q8N4E4 241 aa18.69■□□□□ 0.58
CIRBP-228ENST00000590347 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
CIRBP-228ENST00000590347 GTPBP4Q9BZE4 634 aaKnown RBP18.69■□□□□ 0.58
CIRBP-228ENST00000590347 INSRP06213 1382 aa18.69■□□□□ 0.58
CIRBP-228ENST00000590347 KCNJ4P48050 445 aa18.69■□□□□ 0.58
CIRBP-228ENST00000590347 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
CIRBP-228ENST00000590347 KIF20AO95235 890 aa18.68■□□□□ 0.58
CIRBP-228ENST00000590347 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
CIRBP-228ENST00000590347 SMC4Q9NTJ3 1288 aa18.68■□□□□ 0.58
CIRBP-228ENST00000590347 KANK1Q14678 1352 aa18.68■□□□□ 0.58
CIRBP-228ENST00000590347 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-228ENST00000590347 MAST1Q9Y2H9 1570 aa18.67■□□□□ 0.58
CIRBP-228ENST00000590347 LETM1O95202 739 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-228ENST00000590347 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
CIRBP-228ENST00000590347 GDPD2Q9HCC8 539 aa18.67■□□□□ 0.58
CIRBP-228ENST00000590347 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
CIRBP-228ENST00000590347 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
CIRBP-228ENST00000590347 KIF3AQ9Y496 699 aa18.67■□□□□ 0.58
CIRBP-228ENST00000590347 UGGT1Q9NYU2 1555 aa18.66■□□□□ 0.58
CIRBP-228ENST00000590347 ZFYVE16Q7Z3T8 1539 aa18.66■□□□□ 0.58
CIRBP-228ENST00000590347 USP25Q9UHP3 1055 aa18.66■□□□□ 0.58
CIRBP-228ENST00000590347 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
CIRBP-228ENST00000590347 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
CIRBP-228ENST00000590347 TBC1D9Q6ZT07 1266 aa18.65■□□□□ 0.58
CIRBP-228ENST00000590347 ADGRF5Q8IZF2 1346 aa18.65■□□□□ 0.58
CIRBP-228ENST00000590347 ERICH4A6NGS2 130 aa18.65■□□□□ 0.58
CIRBP-228ENST00000590347 UNC13BO14795 1591 aa18.65■□□□□ 0.58
CIRBP-228ENST00000590347 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
CIRBP-228ENST00000590347 ZKSCAN2Q63HK3 967 aa18.65■□□□□ 0.58
CIRBP-228ENST00000590347 ATP7AQ04656 1500 aa18.64■□□□□ 0.57
CIRBP-228ENST00000590347 TRIM27P14373 513 aa18.64■□□□□ 0.57
CIRBP-228ENST00000590347 NAA30Q147X3 362 aaPredicted RBP18.64■□□□□ 0.57
CIRBP-228ENST00000590347 LRSAM1Q6UWE0 723 aa18.63■□□□□ 0.57
CIRBP-228ENST00000590347 TMEM57Q8N5G2 664 aa18.63■□□□□ 0.57
CIRBP-228ENST00000590347 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
CIRBP-228ENST00000590347 ATP10AO60312 1499 aa18.62■□□□□ 0.57
CIRBP-228ENST00000590347 PTMSP20962 102 aa18.62■□□□□ 0.57
CIRBP-228ENST00000590347 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
CIRBP-228ENST00000590347 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-228ENST00000590347 TMEM132EQ6IEE7 984 aa18.61■□□□□ 0.57
CIRBP-228ENST00000590347 ZFP91Q96JP5 570 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-228ENST00000590347 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
CIRBP-228ENST00000590347 DTNBO60941 627 aa18.6■□□□□ 0.57
CIRBP-228ENST00000590347 RIOK3O14730 519 aaKnown RBP18.6■□□□□ 0.57
CIRBP-228ENST00000590347 IRX5P78411 483 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-228ENST00000590347 APBB1O00213 710 aa18.6■□□□□ 0.57
CIRBP-228ENST00000590347 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
CIRBP-228ENST00000590347 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
CIRBP-228ENST00000590347 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
CIRBP-228ENST00000590347 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms