RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 FAM196AQ6ZSG2 479 aa9.5□□□□□ -0.89
VPS25-204ENST00000589577 WAPLQ7Z5K2 1190 aa9.5□□□□□ -0.89
VPS25-204ENST00000589577 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
VPS25-204ENST00000589577 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
VPS25-204ENST00000589577 FAM50AQ14320 339 aaKnown RBP9.49□□□□□ -0.89
VPS25-204ENST00000589577 NBPF8Q3BBV2 869 aa9.49□□□□□ -0.89
VPS25-204ENST00000589577 NBPF14Q5TI25 921 aa9.49□□□□□ -0.89
VPS25-204ENST00000589577 VGFO15240 615 aaPredicted RBP9.48□□□□□ -0.89
VPS25-204ENST00000589577 PTGER2P43116 358 aa9.48□□□□□ -0.89
VPS25-204ENST00000589577 ANO8Q9HCE9 1232 aaPredicted RBP9.48□□□□□ -0.89
VPS25-204ENST00000589577 SPATA31A1Q5TZJ5 1347 aa9.48□□□□□ -0.89
VPS25-204ENST00000589577 PHRF1Q9P1Y6 1649 aaKnown RBP9.47□□□□□ -0.89
VPS25-204ENST00000589577 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
VPS25-204ENST00000589577 DLC1Q96QB1 1528 aa9.46□□□□□ -0.89
VPS25-204ENST00000589577 PARP4Q9UKK3 1724 aaKnown RBP9.46□□□□□ -0.89
VPS25-204ENST00000589577 PSME1Q06323 249 aa9.46□□□□□ -0.9
VPS25-204ENST00000589577 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
VPS25-204ENST00000589577 SYT17Q9BSW7 474 aa9.45□□□□□ -0.9
VPS25-204ENST00000589577 ABCC11Q96J66 1382 aa9.45□□□□□ -0.9
VPS25-204ENST00000589577 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
VPS25-204ENST00000589577 ZBTB7AO95365 584 aa9.44□□□□□ -0.9
VPS25-204ENST00000589577 FHDC1Q9C0D6 1143 aaPredicted RBP9.44□□□□□ -0.9
VPS25-204ENST00000589577 STK26Q9P289 416 aa9.44□□□□□ -0.9
VPS25-204ENST00000589577 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
VPS25-204ENST00000589577 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
VPS25-204ENST00000589577 RPGRIP1LQ68CZ1 1315 aa9.42□□□□□ -0.9
VPS25-204ENST00000589577 ADGRF5Q8IZF2 1346 aa9.42□□□□□ -0.9
VPS25-204ENST00000589577 SGIP1Q9BQI5 828 aa9.42□□□□□ -0.9
VPS25-204ENST00000589577 YTHDC2Q9H6S0 1430 aaKnown RBP9.41□□□□□ -0.9
VPS25-204ENST00000589577 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
VPS25-204ENST00000589577 SSH2Q76I76 1423 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 ANKARQ7Z5J8 1434 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 KIAA0232Q92628 1395 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 PTF1AQ7RTS3 328 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 PMFBP1Q8TBY8 1022 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 PRDM11Q9NQV5 511 aa9.4□□□□□ -0.9
VPS25-204ENST00000589577 WNK3Q9BYP7 1800 aa9.4□□□□□ -0.91
VPS25-204ENST00000589577 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 MAP3K5Q99683 1374 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 PROM2Q8N271 834 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 STRN4Q9NRL3 753 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 COL24A1Q17RW2 1714 aa9.39□□□□□ -0.91
VPS25-204ENST00000589577 PLSCR1O15162 318 aa9.38□□□□□ -0.91
VPS25-204ENST00000589577 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
VPS25-204ENST00000589577 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 ACIN1Q9UKV3 1341 aaKnown RBP9.37□□□□□ -0.91
VPS25-204ENST00000589577 ATP7BP35670 1465 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 APLP2Q06481 763 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
VPS25-204ENST00000589577 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
VPS25-204ENST00000589577 SPATA31E1Q6ZUB1 1445 aa9.36□□□□□ -0.91
VPS25-204ENST00000589577 PRR36Q9H6K5 1346 aa9.35□□□□□ -0.91
VPS25-204ENST00000589577 PCNTO95613 3336 aa9.35□□□□□ -0.91
VPS25-204ENST00000589577 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
VPS25-204ENST00000589577 MTFR1LQ9H019 292 aa9.35□□□□□ -0.91
VPS25-204ENST00000589577 TULP4Q9NRJ4 1543 aa9.35□□□□□ -0.91
VPS25-204ENST00000589577 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
VPS25-204ENST00000589577 TCP11L2Q8N4U5 519 aa9.34□□□□□ -0.91
VPS25-204ENST00000589577 BCL11BQ9C0K0 894 aaPredicted RBP9.34□□□□□ -0.91
VPS25-204ENST00000589577 TOPAZ1Q8N9V7 1692 aa9.34□□□□□ -0.91
VPS25-204ENST00000589577 DHX57Q6P158 1386 aaKnown RBP9.34□□□□□ -0.91
VPS25-204ENST00000589577 ITSN1Q15811 1721 aa9.34□□□□□ -0.92
VPS25-204ENST00000589577 HSPA6P17066 643 aa9.33□□□□□ -0.92
VPS25-204ENST00000589577 ZC3H6P61129 1189 aaKnown RBP9.33□□□□□ -0.92
VPS25-204ENST00000589577 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS25-204ENST00000589577 SLC15A2Q16348 729 aa9.33□□□□□ -0.92
VPS25-204ENST00000589577 GPR162Q16538 588 aa9.33□□□□□ -0.92
VPS25-204ENST00000589577 ARXQ96QS3 562 aa9.33□□□□□ -0.92
VPS25-204ENST00000589577 COL5A2P05997 1499 aaPredicted RBP9.33□□□□□ -0.92
VPS25-204ENST00000589577 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
VPS25-204ENST00000589577 QSER1Q2KHR3 1735 aa9.32□□□□□ -0.92
VPS25-204ENST00000589577 PRAM1Q96QH2 718 aa9.32□□□□□ -0.92
VPS25-204ENST00000589577 TUBGCP6Q96RT7 1819 aa9.32□□□□□ -0.92
VPS25-204ENST00000589577 ANKRD30BQ9BXX2 1392 aa9.32□□□□□ -0.92
VPS25-204ENST00000589577 ITGAEP38570 1179 aa9.31□□□□□ -0.92
VPS25-204ENST00000589577 TXNRD1Q16881 649 aa9.31□□□□□ -0.92
VPS25-204ENST00000589577 AATKQ6ZMQ8 1374 aa9.31□□□□□ -0.92
VPS25-204ENST00000589577 NHSQ6T4R5 1651 aa9.31□□□□□ -0.92
VPS25-204ENST00000589577 BCL9O00512 1426 aa9.31□□□□□ -0.92
VPS25-204ENST00000589577 CPDO75976 1380 aa9.3□□□□□ -0.92
VPS25-204ENST00000589577 C11orf95C9JLR9 678 aaPredicted RBP9.3□□□□□ -0.92
VPS25-204ENST00000589577 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
VPS25-204ENST00000589577 STK32BQ9NY57 414 aa9.3□□□□□ -0.92
VPS25-204ENST00000589577 THRAP3Q9Y2W1 955 aaKnown RBP9.3□□□□□ -0.92
VPS25-204ENST00000589577 ADGRB1O14514 1584 aa9.29□□□□□ -0.92
VPS25-204ENST00000589577 ADCY9O60503 1353 aa9.29□□□□□ -0.92
VPS25-204ENST00000589577 EVA1CP58658 441 aa9.29□□□□□ -0.92
VPS25-204ENST00000589577 COL18A1P39060 1754 aa9.29□□□□□ -0.92
VPS25-204ENST00000589577 CRB1P82279 1406 aa9.29□□□□□ -0.92
VPS25-204ENST00000589577 YBX3P16989 372 aaKnown RBP eCLIP9.28□□□□□ -0.921e-6■■□□□ 11.7
VPS25-204ENST00000589577 RGL3Q3MIN7 710 aa9.28□□□□□ -0.92
VPS25-204ENST00000589577 NUTM2GQ5VZR2 741 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms