RNA–Protein interactions for RNA: ENST00000589530.5

KDSR-208, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

TSL 2

Gene KDSR, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-208ENST00000589530 PLCH1Q4KWH8 1693 aa28.8■■■□□ 2.2
KDSR-208ENST00000589530 POLR3AO14802 1390 aaPredicted RBP28.79■■■□□ 2.2
KDSR-208ENST00000589530 NBPF8Q3BBV2 869 aa28.79■■■□□ 2.2
KDSR-208ENST00000589530 NWD2Q9ULI1 1742 aa28.78■■■□□ 2.2
KDSR-208ENST00000589530 SRPK2P78362 688 aaKnown RBP28.77■■■□□ 2.2
KDSR-208ENST00000589530 CCDC9Q9Y3X0 531 aaKnown RBP28.77■■■□□ 2.2
KDSR-208ENST00000589530 CABP2Q9NPB3 220 aa28.76■■■□□ 2.19
KDSR-208ENST00000589530 BTG4Q9NY30 223 aa28.76■■■□□ 2.19
KDSR-208ENST00000589530 TOPAZ1Q8N9V7 1692 aa28.76■■■□□ 2.19
KDSR-208ENST00000589530 ONECUT3O60422 494 aaPredicted RBP28.73■■■□□ 2.19
KDSR-208ENST00000589530 NUTM2GQ5VZR2 741 aa28.73■■■□□ 2.19
KDSR-208ENST00000589530 SEPT12Q8IYM1 358 aa28.73■■■□□ 2.19
KDSR-208ENST00000589530 TRPM1Q7Z4N2 1603 aa28.72■■■□□ 2.19
KDSR-208ENST00000589530 CRYBG1Q9Y4K1 1723 aa28.72■■■□□ 2.19
KDSR-208ENST00000589530 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.19
KDSR-208ENST00000589530 COL14A1Q05707 1796 aaKnown RBP28.7■■■□□ 2.19
KDSR-208ENST00000589530 PPIP5K1Q6PFW1 1433 aa28.7■■■□□ 2.19
KDSR-208ENST00000589530 PRDM11Q9NQV5 511 aa28.7■■■□□ 2.18
KDSR-208ENST00000589530 CCDC125Q86Z20 511 aa28.69■■■□□ 2.18
KDSR-208ENST00000589530 ROCK2O75116 1388 aaKnown RBP28.69■■■□□ 2.18
KDSR-208ENST00000589530 ABTB2Q8N961 1025 aa28.68■■■□□ 2.18
KDSR-208ENST00000589530 NRAPQ86VF7 1730 aa28.68■■■□□ 2.18
KDSR-208ENST00000589530 EP400Q96L91 3159 aa28.67■■■□□ 2.18
KDSR-208ENST00000589530 KIAA0232Q92628 1395 aa28.66■■■□□ 2.18
KDSR-208ENST00000589530 CABP1Q9NZU7 370 aa28.66■■■□□ 2.18
KDSR-208ENST00000589530 BRWD3Q6RI45 1802 aa28.65■■■□□ 2.18
KDSR-208ENST00000589530 ZC3H6P61129 1189 aaKnown RBP28.65■■■□□ 2.18
KDSR-208ENST00000589530 CHRNA2Q15822 529 aa28.64■■■□□ 2.18
KDSR-208ENST00000589530 EVC2Q86UK5 1308 aa28.64■■■□□ 2.17
KDSR-208ENST00000589530 FAM98CQ17RN3 349 aaKnown RBP28.63■■■□□ 2.17
KDSR-208ENST00000589530 KRT27Q7Z3Y8 459 aa28.62■■■□□ 2.17
KDSR-208ENST00000589530 SPATA31A5Q5VU36 1347 aa28.62■■■□□ 2.17
KDSR-208ENST00000589530 SPATA31A7Q8IWB4 1347 aa28.62■■■□□ 2.17
KDSR-208ENST00000589530 PHRF1Q9P1Y6 1649 aaKnown RBP28.61■■■□□ 2.17
KDSR-208ENST00000589530 A0A0G2JS52 829 aa28.61■■■□□ 2.17
KDSR-208ENST00000589530 MYT1Q01538 1121 aa28.61■■■□□ 2.17
KDSR-208ENST00000589530 TRIM26Q12899 539 aaPredicted RBP28.6■■■□□ 2.17
KDSR-208ENST00000589530 NLRP13Q86W25 1043 aa28.59■■■□□ 2.17
KDSR-208ENST00000589530 USP19O94966 1318 aa28.58■■■□□ 2.17
KDSR-208ENST00000589530 BRD4O60885 1362 aaPredicted RBP28.58■■■□□ 2.17
KDSR-208ENST00000589530 BLMP54132 1417 aaPredicted RBP28.57■■■□□ 2.16
KDSR-208ENST00000589530 USP6P35125 1406 aa28.56■■■□□ 2.16
KDSR-208ENST00000589530 STRN4Q9NRL3 753 aa28.56■■■□□ 2.16
KDSR-208ENST00000589530 TONSLQ96HA7 1378 aa28.54■■■□□ 2.16
KDSR-208ENST00000589530 GCP02774 474 aa28.54■■■□□ 2.16
KDSR-208ENST00000589530 CPDO75976 1380 aa28.53■■■□□ 2.16
KDSR-208ENST00000589530 SPATA31A1Q5TZJ5 1347 aa28.53■■■□□ 2.16
KDSR-208ENST00000589530 CARD11Q9BXL7 1154 aa28.53■■■□□ 2.16
KDSR-208ENST00000589530 NRKQ7Z2Y5 1582 aa28.53■■■□□ 2.16
KDSR-208ENST00000589530 EVA1CP58658 441 aa28.52■■■□□ 2.16
KDSR-208ENST00000589530 NLRP6P59044 892 aa28.51■■■□□ 2.15
KDSR-208ENST00000589530 SSH2Q76I76 1423 aa28.51■■■□□ 2.15
KDSR-208ENST00000589530 SF3B2Q13435 895 aaKnown RBP28.49■■■□□ 2.15
KDSR-208ENST00000589530 DEFB132Q7Z7B7 95 aa28.49■■■□□ 2.15
KDSR-208ENST00000589530 ZNF692Q9BU19 519 aaPredicted RBP28.49■■■□□ 2.15
KDSR-208ENST00000589530 CAMTA1Q9Y6Y1 1673 aa28.48■■■□□ 2.15
KDSR-208ENST00000589530 ZRANB1Q9UGI0 708 aa28.48■■■□□ 2.15
KDSR-208ENST00000589530 FAM182BQ5T319 152 aa28.46■■■□□ 2.15
KDSR-208ENST00000589530 LARP1Q6PKG0 1096 aaKnown RBP28.46■■■□□ 2.15
KDSR-208ENST00000589530 USP35Q9P2H5 1018 aa28.46■■■□□ 2.15
KDSR-208ENST00000589530 SBNO2Q9Y2G9 1366 aa28.46■■■□□ 2.15
KDSR-208ENST00000589530 THSD7AQ9UPZ6 1657 aa28.45■■■□□ 2.15
KDSR-208ENST00000589530 TTC21BQ7Z4L5 1316 aa28.44■■■□□ 2.14
KDSR-208ENST00000589530 LMO7Q8WWI1 1683 aa28.43■■■□□ 2.14
KDSR-208ENST00000589530 ZBTB7CA1YPR0 619 aa28.42■■■□□ 2.14
KDSR-208ENST00000589530 CPSF1Q10570 1443 aaKnown RBP28.42■■■□□ 2.14
KDSR-208ENST00000589530 BARGINQ6ZT62 677 aa28.41■■■□□ 2.14
KDSR-208ENST00000589530 SLIT3O75094 1523 aa28.41■■■□□ 2.14
KDSR-208ENST00000589530 PIK3C2AO00443 1686 aa28.41■■■□□ 2.14
KDSR-208ENST00000589530 TCP11L2Q8N4U5 519 aa28.39■■■□□ 2.14
KDSR-208ENST00000589530 AKAP12Q02952 1782 aa28.39■■■□□ 2.13
KDSR-208ENST00000589530 KTN1Q86UP2 1357 aaKnown RBP28.38■■■□□ 2.13
KDSR-208ENST00000589530 TTC21AQ8NDW8 1320 aa28.38■■■□□ 2.13
KDSR-208ENST00000589530 AATKQ6ZMQ8 1374 aa28.37■■■□□ 2.13
KDSR-208ENST00000589530 COL5A2P05997 1499 aaPredicted RBP28.37■■■□□ 2.13
KDSR-208ENST00000589530 BAG6P46379 1132 aa28.36■■■□□ 2.13
KDSR-208ENST00000589530 KCNH5Q8NCM2 988 aa28.34■■■□□ 2.13
KDSR-208ENST00000589530 TMC1Q8TDI8 760 aa28.34■■■□□ 2.13
KDSR-208ENST00000589530 THRAP3Q9Y2W1 955 aaKnown RBP28.34■■■□□ 2.13
KDSR-208ENST00000589530 FAM196AQ6ZSG2 479 aa28.33■■■□□ 2.13
KDSR-208ENST00000589530 SOX12O15370 315 aa28.32■■■□□ 2.12
KDSR-208ENST00000589530 PDE3BQ13370 1112 aa28.32■■■□□ 2.12
KDSR-208ENST00000589530 ARHGEF25Q86VW2 580 aa28.32■■■□□ 2.12
KDSR-208ENST00000589530 SLC12A5Q9H2X9 1139 aa28.32■■■□□ 2.12
KDSR-208ENST00000589530 AXIN2Q9Y2T1 843 aa28.32■■■□□ 2.12
KDSR-208ENST00000589530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.31■■■□□ 2.12
KDSR-208ENST00000589530 CRB1P82279 1406 aa28.31■■■□□ 2.12
KDSR-208ENST00000589530 CD163L1Q9NR16 1453 aa28.3■■■□□ 2.12
KDSR-208ENST00000589530 EN1Q05925 392 aaPredicted RBP28.3■■■□□ 2.12
KDSR-208ENST00000589530 COL18A1P39060 1754 aa28.29■■■□□ 2.12
KDSR-208ENST00000589530 ST20-MTHFSA0A0A6YYL1 179 aa28.29■■■□□ 2.12
KDSR-208ENST00000589530 PUS7Q96PZ0 661 aaKnown RBP28.29■■■□□ 2.12
KDSR-208ENST00000589530 TESK2Q96S53 571 aa28.29■■■□□ 2.12
KDSR-208ENST00000589530 TRIM37O94972 964 aa28.28■■■□□ 2.12
KDSR-208ENST00000589530 RGPD1P0DJD0 1748 aa28.28■■■□□ 2.12
KDSR-208ENST00000589530 MON2Q7Z3U7 1717 aa28.28■■■□□ 2.12
KDSR-208ENST00000589530 TOM1L2Q6ZVM7 507 aa28.27■■■□□ 2.12
KDSR-208ENST00000589530 HDGFL2Q7Z4V5 671 aaPredicted RBP28.27■■■□□ 2.12
KDSR-208ENST00000589530 SRCAPQ6ZRS2 3230 aa28.27■■■□□ 2.12
KDSR-208ENST00000589530 NME9Q86XW9 330 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms