RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 NGDNQ8NEJ9 315 aaKnown RBP22.44■■□□□ 1.18
ACTN4-211ENST00000589528 TULP4Q9NRJ4 1543 aa22.43■■□□□ 1.18
ACTN4-211ENST00000589528 ADGRB1O14514 1584 aa22.42■■□□□ 1.18
ACTN4-211ENST00000589528 PRDM11Q9NQV5 511 aa22.41■■□□□ 1.18
ACTN4-211ENST00000589528 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
ACTN4-211ENST00000589528 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
ACTN4-211ENST00000589528 EN1Q05925 392 aaPredicted RBP22.4■■□□□ 1.18
ACTN4-211ENST00000589528 SPATA31A5Q5VU36 1347 aa22.39■■□□□ 1.18
ACTN4-211ENST00000589528 SPATA31A7Q8IWB4 1347 aa22.39■■□□□ 1.18
ACTN4-211ENST00000589528 WASLO00401 505 aaPredicted RBP22.39■■□□□ 1.17
ACTN4-211ENST00000589528 HRCP23327 699 aa22.39■■□□□ 1.17
ACTN4-211ENST00000589528 FAM182BQ5T319 152 aa22.39■■□□□ 1.17
ACTN4-211ENST00000589528 PRR36Q9H6K5 1346 aa22.38■■□□□ 1.17
ACTN4-211ENST00000589528 CRYBG1Q9Y4K1 1723 aa22.38■■□□□ 1.17
ACTN4-211ENST00000589528 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
ACTN4-211ENST00000589528 THSD7AQ9UPZ6 1657 aa22.35■■□□□ 1.17
ACTN4-211ENST00000589528 RAB3GAP2Q9H2M9 1393 aa22.35■■□□□ 1.17
ACTN4-211ENST00000589528 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
ACTN4-211ENST00000589528 STRN4Q9NRL3 753 aa22.34■■□□□ 1.17
ACTN4-211ENST00000589528 R3HDM1Q15032 1099 aaKnown RBP22.33■■□□□ 1.17
ACTN4-211ENST00000589528 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.17
ACTN4-211ENST00000589528 PHRF1Q9P1Y6 1649 aaKnown RBP22.31■■□□□ 1.16
ACTN4-211ENST00000589528 KIAA0232Q92628 1395 aa22.31■■□□□ 1.16
ACTN4-211ENST00000589528 CHRNA2Q15822 529 aa22.31■■□□□ 1.16
ACTN4-211ENST00000589528 DISP2A7MBM2 1401 aa22.31■■□□□ 1.16
ACTN4-211ENST00000589528 FAM196AQ6ZSG2 479 aa22.3■■□□□ 1.16
ACTN4-211ENST00000589528 NUDT16Q96DE0 195 aaKnown RBP22.3■■□□□ 1.16
ACTN4-211ENST00000589528 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
ACTN4-211ENST00000589528 SPATA31A1Q5TZJ5 1347 aa22.3■■□□□ 1.16
ACTN4-211ENST00000589528 ATP7BP35670 1465 aa22.29■■□□□ 1.16
ACTN4-211ENST00000589528 ZC3H6P61129 1189 aaKnown RBP22.29■■□□□ 1.16
ACTN4-211ENST00000589528 EZH2Q15910 746 aaKnown RBP22.29■■□□□ 1.16
ACTN4-211ENST00000589528 TRIM37O94972 964 aa22.28■■□□□ 1.16
ACTN4-211ENST00000589528 EVA1CP58658 441 aa22.28■■□□□ 1.16
ACTN4-211ENST00000589528 NUTM2GQ5VZR2 741 aa22.28■■□□□ 1.16
ACTN4-211ENST00000589528 USP35Q9P2H5 1018 aa22.28■■□□□ 1.16
ACTN4-211ENST00000589528 APBA3O96018 575 aa22.25■■□□□ 1.15
ACTN4-211ENST00000589528 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
ACTN4-211ENST00000589528 CDK19Q9BWU1 502 aa22.23■■□□□ 1.15
ACTN4-211ENST00000589528 CAMKK2Q96RR4 588 aa22.22■■□□□ 1.15
ACTN4-211ENST00000589528 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
ACTN4-211ENST00000589528 PARD3Q8TEW0 1356 aa22.22■■□□□ 1.15
ACTN4-211ENST00000589528 ACEP12821 1306 aa22.21■■□□□ 1.15
ACTN4-211ENST00000589528 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
ACTN4-211ENST00000589528 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
ACTN4-211ENST00000589528 ABTB2Q8N961 1025 aa22.2■■□□□ 1.14
ACTN4-211ENST00000589528 CCDC61Q9Y6R9 512 aa22.2■■□□□ 1.14
ACTN4-211ENST00000589528 BARGINQ6ZT62 677 aa22.19■■□□□ 1.14
ACTN4-211ENST00000589528 POLR3AO14802 1390 aaPredicted RBP22.19■■□□□ 1.14
ACTN4-211ENST00000589528 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
ACTN4-211ENST00000589528 NBPF14Q5TI25 921 aa22.18■■□□□ 1.14
ACTN4-211ENST00000589528 RREB1Q92766 1687 aa22.17■■□□□ 1.14
ACTN4-211ENST00000589528 TCP11L2Q8N4U5 519 aa22.17■■□□□ 1.14
ACTN4-211ENST00000589528 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
ACTN4-211ENST00000589528 NUP188Q5SRE5 1749 aa22.16■■□□□ 1.14
ACTN4-211ENST00000589528 CAMTA1Q9Y6Y1 1673 aa22.15■■□□□ 1.14
ACTN4-211ENST00000589528 KIAA1210Q9ULL0 1709 aa22.14■■□□□ 1.14
ACTN4-211ENST00000589528 PLEKHG3A1L390 1219 aa22.14■■□□□ 1.13
ACTN4-211ENST00000589528 NLRP13Q86W25 1043 aa22.14■■□□□ 1.13
ACTN4-211ENST00000589528 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.13
ACTN4-211ENST00000589528 SRPK2P78362 688 aaKnown RBP22.13■■□□□ 1.13
ACTN4-211ENST00000589528 THRAP3Q9Y2W1 955 aaKnown RBP22.13■■□□□ 1.13
ACTN4-211ENST00000589528 CPDO75976 1380 aa22.12■■□□□ 1.13
ACTN4-211ENST00000589528 ZBTB7CA1YPR0 619 aa22.12■■□□□ 1.13
ACTN4-211ENST00000589528 PPP1R1BQ9UD71 204 aaPredicted RBP22.11■■□□□ 1.13
ACTN4-211ENST00000589528 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
ACTN4-211ENST00000589528 USP19O94966 1318 aa22.1■■□□□ 1.13
ACTN4-211ENST00000589528 GCP02774 474 aa22.1■■□□□ 1.13
ACTN4-211ENST00000589528 PPIP5K1Q6PFW1 1433 aa22.1■■□□□ 1.13
ACTN4-211ENST00000589528 C11orf95C9JLR9 678 aaPredicted RBP22.09■■□□□ 1.13
ACTN4-211ENST00000589528 COL5A2P05997 1499 aaPredicted RBP22.08■■□□□ 1.12
ACTN4-211ENST00000589528 DCAF8L1A6NGE4 600 aa22.06■■□□□ 1.12
ACTN4-211ENST00000589528 SPON1Q9HCB6 807 aa22.06■■□□□ 1.12
ACTN4-211ENST00000589528 CRB1P82279 1406 aa22.06■■□□□ 1.12
ACTN4-211ENST00000589528 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
ACTN4-211ENST00000589528 YY1P25490 414 aa22.05■■□□□ 1.12
ACTN4-211ENST00000589528 CABP2Q9NPB3 220 aa22.05■■□□□ 1.12
ACTN4-211ENST00000589528 OVOS2A0A0G2JMS6 1433 aa22.05■■□□□ 1.12
ACTN4-211ENST00000589528 OVOS2A0A0J9YW53 1432 aa22.05■■□□□ 1.12
ACTN4-211ENST00000589528 OVOS2Q6IE36 1432 aa22.05■■□□□ 1.12
ACTN4-211ENST00000589528 QRICH2Q9H0J4 1663 aa22.04■■□□□ 1.12
ACTN4-211ENST00000589528 BRD4O60885 1362 aaPredicted RBP22.04■■□□□ 1.12
ACTN4-211ENST00000589528 NLRP6P59044 892 aa22.04■■□□□ 1.12
ACTN4-211ENST00000589528 NBPF1Q3BBV0 1214 aa22.04■■□□□ 1.12
ACTN4-211ENST00000589528 SBF2Q86WG5 1849 aa22.03■■□□□ 1.12
ACTN4-211ENST00000589528 KCNQ2O43526 872 aa22.02■■□□□ 1.12
ACTN4-211ENST00000589528 TOM1L2Q6ZVM7 507 aa22.02■■□□□ 1.12
ACTN4-211ENST00000589528 DDB1Q16531 1140 aa22.01■■□□□ 1.11
ACTN4-211ENST00000589528 RGPD3A6NKT7 1758 aaPredicted RBP22.01■■□□□ 1.11
ACTN4-211ENST00000589528 RGPD4Q7Z3J3 1758 aa22.01■■□□□ 1.11
ACTN4-211ENST00000589528 LRRC37A3O60309 1634 aa22.01■■□□□ 1.11
ACTN4-211ENST00000589528 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
ACTN4-211ENST00000589528 USP6P35125 1406 aa21.99■■□□□ 1.11
ACTN4-211ENST00000589528 CABP1Q9NZU7 370 aa21.99■■□□□ 1.11
ACTN4-211ENST00000589528 PEAK1Q9H792 1746 aa21.99■■□□□ 1.11
ACTN4-211ENST00000589528 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
ACTN4-211ENST00000589528 WNK3Q9BYP7 1800 aa21.98■■□□□ 1.11
ACTN4-211ENST00000589528 NINLQ9Y2I6 1382 aa21.97■■□□□ 1.11
ACTN4-211ENST00000589528 SLIT3O75094 1523 aa21.96■■□□□ 1.11
ACTN4-211ENST00000589528 PLSCR1O15162 318 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms