RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-209ENST00000589444 ARMC5Q96C12 935 aa7.14□□□□□ -1.27
PTPN2-209ENST00000589444 BEGAINQ9BUH8 593 aa7.14□□□□□ -1.27
PTPN2-209ENST00000589444 SSTR3P32745 418 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 CLCN1P35523 988 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 CLK2P49760 499 aaKnown RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 RHBDL3P58872 404 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 NLRP6P59044 892 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 BIRC2Q13490 618 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 RNF187Q5TA31 235 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 MYSM1Q5VVJ2 828 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 FBXO31Q5XUX0 539 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 IRF2BPLQ9H1B7 796 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 COL4A3BPQ9Y5P4 624 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 CCDC85AQ96PX6 553 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 SENP7Q9BQF6 1050 aa7.13□□□□□ -1.27
PTPN2-209ENST00000589444 BSDC1Q9NW68 430 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-209ENST00000589444 DPYSL4O14531 572 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 FCHSD2O94868 740 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 CALRP27797 417 aaKnown RBP7.12□□□□□ -1.27
PTPN2-209ENST00000589444 GTF2F1P35269 517 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTPN2-209ENST00000589444 TIE1P35590 1138 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 C9orf131Q5VYM1 1079 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 PPP2R2DQ66LE6 453 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 SCYL1Q96KG9 808 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
PTPN2-209ENST00000589444 SCAMP3O14828 347 aaKnown RBP7.12□□□□□ -1.27
PTPN2-209ENST00000589444 GYS2P54840 703 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 RAD51AP2Q09MP3 1159 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 AMOTL1Q8IY63 956 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 RASEFQ8IZ41 740 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 SDR16C5Q8N3Y7 309 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 IPO4Q8TEX9 1081 aaKnown RBP7.12□□□□□ -1.27
PTPN2-209ENST00000589444 TINF2Q9BSI4 451 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 BACH2Q9BYV9 841 aa7.12□□□□□ -1.27
PTPN2-209ENST00000589444 PHF14O94880 888 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 TBX4P57082 545 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 PPP4CP60510 307 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 RPS6KC1Q96S38 1066 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 TRIM34Q9BYJ4 488 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 GPCPD1Q9NPB8 672 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 RIMBP3CA6NJZ7 1639 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 RIMBP3BA6NNM3 1639 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 RIMBP3Q9UFD9 1639 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 BDNFP23560 247 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 PCDH12Q9NPG4 1184 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
PTPN2-209ENST00000589444 IQSEC3Q9UPP2 1182 aaPredicted RBP7.11□□□□□ -1.27
PTPN2-209ENST00000589444 ANP32CO43423 234 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 HSD3B2P26439 372 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 FAM193AP78312 1265 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 XPCQ01831 940 aaPredicted RBP7.1□□□□□ -1.27
PTPN2-209ENST00000589444 WASHC4Q2M389 1173 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 CDAN1Q8IWY9 1227 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 G3BP2Q9UN86 482 aaKnown RBP7.1□□□□□ -1.27
PTPN2-209ENST00000589444 ZNF746Q6NUN9 644 aaPredicted RBP7.1□□□□□ -1.27
PTPN2-209ENST00000589444 TMC2Q8TDI7 906 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 BIN2Q9UBW5 565 aaPredicted RBP7.1□□□□□ -1.27
PTPN2-209ENST00000589444 FBXO9Q9UK97 447 aaPredicted RBP7.1□□□□□ -1.27
PTPN2-209ENST00000589444 PRR12Q9ULL5 1215 aa7.1□□□□□ -1.27
PTPN2-209ENST00000589444 KIF12Q96FN5 646 aa7.09□□□□□ -1.27
PTPN2-209ENST00000589444 SWAP70Q9UH65 585 aa7.09□□□□□ -1.27
PTPN2-209ENST00000589444 CCDC61Q9Y6R9 512 aa7.09□□□□□ -1.27
PTPN2-209ENST00000589444 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
PTPN2-209ENST00000589444 IER5LQ5T953 404 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 TMEM164Q5U3C3 297 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 PMFBP1Q8TBY8 1022 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 SPC25Q9HBM1 224 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 S100BP04271 92 aaPredicted RBP7.08□□□□□ -1.28
PTPN2-209ENST00000589444 SSFA2P28290 1259 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 RBL2Q08999 1139 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 JAZF1Q86VZ6 243 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 RPUSD2Q8IZ73 545 aaKnown RBP7.08□□□□□ -1.28
PTPN2-209ENST00000589444 ALG2Q9H553 416 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 BMP2KQ9NSY1 1161 aaPredicted RBP7.08□□□□□ -1.28
PTPN2-209ENST00000589444 IFT57Q9NWB7 429 aa7.08□□□□□ -1.28
PTPN2-209ENST00000589444 ZNF500O60304 480 aaPredicted RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 FMNL3Q8IVF7 1028 aa7.07□□□□□ -1.28
PTPN2-209ENST00000589444 UCN2Q96RP3 112 aa7.07□□□□□ -1.28
PTPN2-209ENST00000589444 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 THOC2Q8NI27 1593 aaKnown RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 PRC1O43663 620 aa7.07□□□□□ -1.28
PTPN2-209ENST00000589444 MDM2Q00987 491 aaPredicted RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 CYB5RLQ6IPT4 315 aa7.07□□□□□ -1.28
PTPN2-209ENST00000589444 FILIP1Q7Z7B0 1213 aa7.07□□□□□ -1.28
PTPN2-209ENST00000589444 GEMIN8Q9NWZ8 242 aaKnown RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 DDX56Q9NY93 547 aaKnown RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 MAFBQ9Y5Q3 323 aaPredicted RBP7.07□□□□□ -1.28
PTPN2-209ENST00000589444 CCDC189A1A4V9 331 aa7.06□□□□□ -1.28
PTPN2-209ENST00000589444 SERPINB4P48594 390 aa7.06□□□□□ -1.28
PTPN2-209ENST00000589444 ZNF280DQ6N043 979 aa7.06□□□□□ -1.28
PTPN2-209ENST00000589444 FTSJ3Q8IY81 847 aaKnown RBP7.06□□□□□ -1.28
PTPN2-209ENST00000589444 CXorf38Q8TB03 319 aa7.06□□□□□ -1.28
PTPN2-209ENST00000589444 DMGDHQ9UI17 866 aaKnown RBP7.06□□□□□ -1.28
PTPN2-209ENST00000589444 PHF8Q9UPP1 1060 aa7.06□□□□□ -1.28
PTPN2-209ENST00000589444 LMTK3Q96Q04 1460 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms