RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 ADGRB1O14514 1584 aa24.62■■□□□ 1.53
SEC11C-205ENST00000588875 ADGRB2O60241 1585 aa24.62■■□□□ 1.53
SEC11C-205ENST00000588875 WASLO00401 505 aaPredicted RBP24.6■■□□□ 1.53
SEC11C-205ENST00000588875 COL14A1Q05707 1796 aaKnown RBP24.59■■□□□ 1.53
SEC11C-205ENST00000588875 ALS2Q96Q42 1657 aa24.59■■□□□ 1.53
SEC11C-205ENST00000588875 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
SEC11C-205ENST00000588875 NGDNQ8NEJ9 315 aaKnown RBP24.58■■□□□ 1.53
SEC11C-205ENST00000588875 PAK3O75914 559 aaPredicted RBP24.57■■□□□ 1.52
SEC11C-205ENST00000588875 EZH2Q15910 746 aaKnown RBP24.56■■□□□ 1.52
SEC11C-205ENST00000588875 PRDM11Q9NQV5 511 aa24.56■■□□□ 1.52
SEC11C-205ENST00000588875 TULP4Q9NRJ4 1543 aa24.56■■□□□ 1.52
SEC11C-205ENST00000588875 EIF3AQ14152 1382 aaKnown RBP24.55■■□□□ 1.52
SEC11C-205ENST00000588875 KDM2AQ9Y2K7 1162 aa24.55■■□□□ 1.52
SEC11C-205ENST00000588875 DISP2A7MBM2 1401 aa24.54■■□□□ 1.52
SEC11C-205ENST00000588875 SPATA31A1Q5TZJ5 1347 aa24.54■■□□□ 1.52
SEC11C-205ENST00000588875 THSD7AQ9UPZ6 1657 aa24.53■■□□□ 1.52
SEC11C-205ENST00000588875 CHRNA2Q15822 529 aa24.53■■□□□ 1.52
SEC11C-205ENST00000588875 CAMKK2Q96RR4 588 aa24.53■■□□□ 1.52
SEC11C-205ENST00000588875 KIAA0232Q92628 1395 aa24.52■■□□□ 1.52
SEC11C-205ENST00000588875 RGPD1P0DJD0 1748 aa24.52■■□□□ 1.52
SEC11C-205ENST00000588875 DCAF11Q8TEB1 546 aa24.51■■□□□ 1.51
SEC11C-205ENST00000588875 CRYBG1Q9Y4K1 1723 aa24.5■■□□□ 1.51
SEC11C-205ENST00000588875 TRIM37O94972 964 aa24.5■■□□□ 1.51
SEC11C-205ENST00000588875 NUDT16Q96DE0 195 aaKnown RBP24.49■■□□□ 1.51
SEC11C-205ENST00000588875 STRN4Q9NRL3 753 aa24.49■■□□□ 1.51
SEC11C-205ENST00000588875 ZC3H6P61129 1189 aaKnown RBP24.48■■□□□ 1.51
SEC11C-205ENST00000588875 FAM196AQ6ZSG2 479 aa24.48■■□□□ 1.51
SEC11C-205ENST00000588875 NUTM2GQ5VZR2 741 aa24.47■■□□□ 1.51
SEC11C-205ENST00000588875 TNS1Q9HBL0 1735 aaKnown RBP24.47■■□□□ 1.51
SEC11C-205ENST00000588875 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
SEC11C-205ENST00000588875 APBA3O96018 575 aa24.46■■□□□ 1.51
SEC11C-205ENST00000588875 ATP7BP35670 1465 aa24.45■■□□□ 1.5
SEC11C-205ENST00000588875 USP35Q9P2H5 1018 aa24.44■■□□□ 1.5
SEC11C-205ENST00000588875 STAC3Q96MF2 364 aa24.42■■□□□ 1.5
SEC11C-205ENST00000588875 CDK19Q9BWU1 502 aa24.42■■□□□ 1.5
SEC11C-205ENST00000588875 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
SEC11C-205ENST00000588875 BARGINQ6ZT62 677 aa24.41■■□□□ 1.5
SEC11C-205ENST00000588875 EVA1CP58658 441 aa24.4■■□□□ 1.5
SEC11C-205ENST00000588875 ACEP12821 1306 aa24.39■■□□□ 1.5
SEC11C-205ENST00000588875 SSH2Q76I76 1423 aa24.39■■□□□ 1.5
SEC11C-205ENST00000588875 PDE3BQ13370 1112 aa24.39■■□□□ 1.49
SEC11C-205ENST00000588875 LARP1Q6PKG0 1096 aaKnown RBP24.39■■□□□ 1.49
SEC11C-205ENST00000588875 PARD3Q8TEW0 1356 aa24.39■■□□□ 1.49
SEC11C-205ENST00000588875 POLR3AO14802 1390 aaPredicted RBP24.38■■□□□ 1.49
SEC11C-205ENST00000588875 PHRF1Q9P1Y6 1649 aaKnown RBP24.38■■□□□ 1.49
SEC11C-205ENST00000588875 PLEKHG3A1L390 1219 aa24.36■■□□□ 1.49
SEC11C-205ENST00000588875 CCDC61Q9Y6R9 512 aa24.36■■□□□ 1.49
SEC11C-205ENST00000588875 CAMTA1Q9Y6Y1 1673 aa24.36■■□□□ 1.49
SEC11C-205ENST00000588875 TCP11L2Q8N4U5 519 aa24.35■■□□□ 1.49
SEC11C-205ENST00000588875 ABTB2Q8N961 1025 aa24.34■■□□□ 1.49
SEC11C-205ENST00000588875 ARHGEF28Q8N1W1 1705 aaKnown RBP24.34■■□□□ 1.49
SEC11C-205ENST00000588875 ITSN1Q15811 1721 aa24.32■■□□□ 1.48
SEC11C-205ENST00000588875 CPDO75976 1380 aa24.32■■□□□ 1.48
SEC11C-205ENST00000588875 USP19O94966 1318 aa24.32■■□□□ 1.48
SEC11C-205ENST00000588875 NBPF14Q5TI25 921 aa24.31■■□□□ 1.48
SEC11C-205ENST00000588875 NRKQ7Z2Y5 1582 aa24.29■■□□□ 1.48
SEC11C-205ENST00000588875 GCP02774 474 aa24.29■■□□□ 1.48
SEC11C-205ENST00000588875 THRAP3Q9Y2W1 955 aaKnown RBP24.29■■□□□ 1.48
SEC11C-205ENST00000588875 RREB1Q92766 1687 aa24.28■■□□□ 1.48
SEC11C-205ENST00000588875 TOPAZ1Q8N9V7 1692 aa24.27■■□□□ 1.48
SEC11C-205ENST00000588875 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
SEC11C-205ENST00000588875 NUP188Q5SRE5 1749 aa24.27■■□□□ 1.48
SEC11C-205ENST00000588875 NLRP13Q86W25 1043 aa24.26■■□□□ 1.47
SEC11C-205ENST00000588875 YY1P25490 414 aa24.25■■□□□ 1.47
SEC11C-205ENST00000588875 NBPF1Q3BBV0 1214 aa24.25■■□□□ 1.47
SEC11C-205ENST00000588875 SPON1Q9HCB6 807 aa24.24■■□□□ 1.47
SEC11C-205ENST00000588875 KCNQ2O43526 872 aa24.23■■□□□ 1.47
SEC11C-205ENST00000588875 COL5A2P05997 1499 aaPredicted RBP24.23■■□□□ 1.47
SEC11C-205ENST00000588875 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
SEC11C-205ENST00000588875 CABP2Q9NPB3 220 aa24.21■■□□□ 1.47
SEC11C-205ENST00000588875 PPIP5K1Q6PFW1 1433 aa24.2■■□□□ 1.46
SEC11C-205ENST00000588875 PPP1R1BQ9UD71 204 aaPredicted RBP24.2■■□□□ 1.46
SEC11C-205ENST00000588875 CRB1P82279 1406 aa24.19■■□□□ 1.46
SEC11C-205ENST00000588875 ZBTB7CA1YPR0 619 aa24.19■■□□□ 1.46
SEC11C-205ENST00000588875 C11orf95C9JLR9 678 aaPredicted RBP24.19■■□□□ 1.46
SEC11C-205ENST00000588875 PTF1AQ7RTS3 328 aa24.19■■□□□ 1.46
SEC11C-205ENST00000588875 PLSCR1O15162 318 aa24.18■■□□□ 1.46
SEC11C-205ENST00000588875 PARP4Q9UKK3 1724 aaKnown RBP24.18■■□□□ 1.46
SEC11C-205ENST00000588875 NLRP6P59044 892 aa24.17■■□□□ 1.46
SEC11C-205ENST00000588875 OVOS2A0A0G2JMS6 1433 aa24.17■■□□□ 1.46
SEC11C-205ENST00000588875 OVOS2A0A0J9YW53 1432 aa24.17■■□□□ 1.46
SEC11C-205ENST00000588875 OVOS2Q6IE36 1432 aa24.17■■□□□ 1.46
SEC11C-205ENST00000588875 ANO8Q9HCE9 1232 aaPredicted RBP24.16■■□□□ 1.46
SEC11C-205ENST00000588875 CABP1Q9NZU7 370 aa24.16■■□□□ 1.46
SEC11C-205ENST00000588875 BRD4O60885 1362 aaPredicted RBP24.16■■□□□ 1.46
SEC11C-205ENST00000588875 AATKQ6ZMQ8 1374 aa24.16■■□□□ 1.46
SEC11C-205ENST00000588875 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
SEC11C-205ENST00000588875 PEAK1Q9H792 1746 aa24.15■■□□□ 1.46
SEC11C-205ENST00000588875 DDB1Q16531 1140 aa24.14■■□□□ 1.45
SEC11C-205ENST00000588875 PROM2Q8N271 834 aa24.14■■□□□ 1.45
SEC11C-205ENST00000588875 AXIN2Q9Y2T1 843 aa24.14■■□□□ 1.45
SEC11C-205ENST00000588875 NINLQ9Y2I6 1382 aa24.14■■□□□ 1.45
SEC11C-205ENST00000588875 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
SEC11C-205ENST00000588875 TOM1L2Q6ZVM7 507 aa24.13■■□□□ 1.45
SEC11C-205ENST00000588875 BCL11BQ9C0K0 894 aaPredicted RBP24.13■■□□□ 1.45
SEC11C-205ENST00000588875 PDGFDQ9GZP0 370 aaPredicted RBP24.13■■□□□ 1.45
SEC11C-205ENST00000588875 USP6P35125 1406 aa24.12■■□□□ 1.45
SEC11C-205ENST00000588875 MARCH10Q8NA82 808 aaPredicted RBP24.12■■□□□ 1.45
SEC11C-205ENST00000588875 SLIT3O75094 1523 aa24.1■■□□□ 1.45
SEC11C-205ENST00000588875 DCAF8L1A6NGE4 600 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms