RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
NPC1-207ENST00000588867 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
NPC1-207ENST00000588867 NSD2O96028 1365 aa19.66■□□□□ 0.74
NPC1-207ENST00000588867 CCER2I3L3R5 266 aa19.66■□□□□ 0.74
NPC1-207ENST00000588867 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
NPC1-207ENST00000588867 KIF20BQ96Q89 1820 aa19.65■□□□□ 0.74
NPC1-207ENST00000588867 ZRANB1Q9UGI0 708 aa19.64■□□□□ 0.74
NPC1-207ENST00000588867 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
NPC1-207ENST00000588867 BRINP3Q76B58 766 aa19.63■□□□□ 0.73
NPC1-207ENST00000588867 KRT28Q7Z3Y7 464 aa19.63■□□□□ 0.73
NPC1-207ENST00000588867 DDX17Q92841 729 aaKnown RBP19.63■□□□□ 0.73
NPC1-207ENST00000588867 SSH2Q76I76 1423 aa19.63■□□□□ 0.73
NPC1-207ENST00000588867 TTC21AQ8NDW8 1320 aa19.62■□□□□ 0.73
NPC1-207ENST00000588867 NRKQ7Z2Y5 1582 aa19.62■□□□□ 0.73
NPC1-207ENST00000588867 PPP2R1AP30153 589 aa19.62■□□□□ 0.73
NPC1-207ENST00000588867 CCDC184Q52MB2 194 aa19.62■□□□□ 0.73
NPC1-207ENST00000588867 COG3Q96JB2 828 aa19.62■□□□□ 0.73
NPC1-207ENST00000588867 ABTB2Q8N961 1025 aa19.61■□□□□ 0.73
NPC1-207ENST00000588867 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
NPC1-207ENST00000588867 NUTM2GQ5VZR2 741 aa19.59■□□□□ 0.73
NPC1-207ENST00000588867 NLRP13Q86W25 1043 aa19.59■□□□□ 0.73
NPC1-207ENST00000588867 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
NPC1-207ENST00000588867 BRD4O60885 1362 aaPredicted RBP19.59■□□□□ 0.73
NPC1-207ENST00000588867 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
NPC1-207ENST00000588867 ANKRD26Q9UPS8 1709 aa19.59■□□□□ 0.73
NPC1-207ENST00000588867 NLRP6P59044 892 aa19.58■□□□□ 0.73
NPC1-207ENST00000588867 TOM1O60784 492 aa19.56■□□□□ 0.72
NPC1-207ENST00000588867 FBLN1P23142 703 aa19.56■□□□□ 0.72
NPC1-207ENST00000588867 PIK3C2AO00443 1686 aa19.54■□□□□ 0.72
NPC1-207ENST00000588867 CERKQ8TCT0 537 aa19.54■□□□□ 0.72
NPC1-207ENST00000588867 SOX12O15370 315 aa19.54■□□□□ 0.72
NPC1-207ENST00000588867 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
NPC1-207ENST00000588867 UBAP1LF5GYI3 381 aa19.53■□□□□ 0.72
NPC1-207ENST00000588867 MTHFSP49914 203 aa19.53■□□□□ 0.72
NPC1-207ENST00000588867 PIP4K2BP78356 416 aa19.53■□□□□ 0.72
NPC1-207ENST00000588867 USP31Q70CQ4 1352 aa19.52■□□□□ 0.72
NPC1-207ENST00000588867 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
NPC1-207ENST00000588867 OVOS2A0A0J9YW53 1432 aa19.52■□□□□ 0.72
NPC1-207ENST00000588867 OVOS2Q6IE36 1432 aa19.52■□□□□ 0.72
NPC1-207ENST00000588867 TRPM3Q9HCF6 1732 aaPredicted RBP19.52■□□□□ 0.72
NPC1-207ENST00000588867 ROBO1Q9Y6N7 1651 aa19.51■□□□□ 0.71
NPC1-207ENST00000588867 PXDNQ92626 1479 aa19.51■□□□□ 0.71
NPC1-207ENST00000588867 PPM1GO15355 546 aaPredicted RBP19.51■□□□□ 0.71
NPC1-207ENST00000588867 SBNO1A3KN83 1393 aa19.5■□□□□ 0.71
NPC1-207ENST00000588867 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
NPC1-207ENST00000588867 SOS2Q07890 1332 aaPredicted RBP19.49■□□□□ 0.71
NPC1-207ENST00000588867 RRS1Q15050 365 aaKnown RBP19.49■□□□□ 0.71
NPC1-207ENST00000588867 MAP2P11137 1827 aaKnown RBP19.48■□□□□ 0.71
NPC1-207ENST00000588867 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
NPC1-207ENST00000588867 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
NPC1-207ENST00000588867 IQSEC2Q5JU85 1478 aa19.47■□□□□ 0.71
NPC1-207ENST00000588867 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
NPC1-207ENST00000588867 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
NPC1-207ENST00000588867 EMILIN1Q9Y6C2 1016 aa19.47■□□□□ 0.71
NPC1-207ENST00000588867 AATKQ6ZMQ8 1374 aa19.47■□□□□ 0.71
NPC1-207ENST00000588867 NHSL1Q5SYE7 1610 aa19.46■□□□□ 0.71
NPC1-207ENST00000588867 TNS3Q68CZ2 1445 aa19.46■□□□□ 0.71
NPC1-207ENST00000588867 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
NPC1-207ENST00000588867 ALS2Q96Q42 1657 aa19.45■□□□□ 0.7
NPC1-207ENST00000588867 MARF1Q9Y4F3 1742 aaKnown RBP19.45■□□□□ 0.7
NPC1-207ENST00000588867 KCNH5Q8NCM2 988 aa19.44■□□□□ 0.7
NPC1-207ENST00000588867 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
NPC1-207ENST00000588867 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
NPC1-207ENST00000588867 GCP02774 474 aa19.42■□□□□ 0.7
NPC1-207ENST00000588867 CABLES1Q8TDN4 633 aa19.42■□□□□ 0.7
NPC1-207ENST00000588867 MAP3K19Q56UN5 1328 aa19.41■□□□□ 0.7
NPC1-207ENST00000588867 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
NPC1-207ENST00000588867 WDR43Q15061 677 aaKnown RBP eCLIP19.41■□□□□ 0.7
NPC1-207ENST00000588867 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
NPC1-207ENST00000588867 USP19O94966 1318 aa19.41■□□□□ 0.7
NPC1-207ENST00000588867 AMPHP49418 695 aa19.41■□□□□ 0.7
NPC1-207ENST00000588867 AHDC1Q5TGY3 1603 aaPredicted RBP19.4■□□□□ 0.7
NPC1-207ENST00000588867 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
NPC1-207ENST00000588867 PHLPP1O60346 1717 aa19.37■□□□□ 0.69
NPC1-207ENST00000588867 HAP1P54257 671 aaPredicted RBP19.37■□□□□ 0.69
NPC1-207ENST00000588867 MED1Q15648 1581 aaPredicted RBP19.37■□□□□ 0.69
NPC1-207ENST00000588867 SMG6Q86US8 1419 aaKnown RBP19.37■□□□□ 0.69
NPC1-207ENST00000588867 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
NPC1-207ENST00000588867 SLIT3O75094 1523 aa19.37■□□□□ 0.69
NPC1-207ENST00000588867 PNPLA6Q8IY17 1366 aa19.37■□□□□ 0.69
NPC1-207ENST00000588867 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
NPC1-207ENST00000588867 HSP90AB2PQ58FF8 381 aa19.36■□□□□ 0.69
NPC1-207ENST00000588867 NUDCQ9Y266 331 aa19.36■□□□□ 0.69
NPC1-207ENST00000588867 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
NPC1-207ENST00000588867 NFAT5O94916 1531 aa19.36■□□□□ 0.69
NPC1-207ENST00000588867 U2SURPO15042 1029 aaKnown RBP19.35■□□□□ 0.69
NPC1-207ENST00000588867 PEAK1Q9H792 1746 aa19.35■□□□□ 0.69
NPC1-207ENST00000588867 LTN1O94822 1766 aa19.34■□□□□ 0.69
NPC1-207ENST00000588867 INSRP06213 1382 aa19.34■□□□□ 0.69
NPC1-207ENST00000588867 FLT4P35916 1363 aa19.34■□□□□ 0.69
NPC1-207ENST00000588867 ARHGEF25Q86VW2 580 aa19.34■□□□□ 0.69
NPC1-207ENST00000588867 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
NPC1-207ENST00000588867 HOXC9P31274 260 aa19.34■□□□□ 0.69
NPC1-207ENST00000588867 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
NPC1-207ENST00000588867 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
NPC1-207ENST00000588867 PHRF1Q9P1Y6 1649 aaKnown RBP19.33■□□□□ 0.68
NPC1-207ENST00000588867 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
NPC1-207ENST00000588867 IL13P35225 146 aa19.32■□□□□ 0.68
NPC1-207ENST00000588867 IP6K1Q92551 441 aa19.32■□□□□ 0.68
NPC1-207ENST00000588867 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms