RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 STK26Q9P289 416 aa11.28□□□□□ -0.6
GPATCH8-206ENST00000588554 RPGRIP1LQ68CZ1 1315 aa11.28□□□□□ -0.6
GPATCH8-206ENST00000588554 SHPRHQ149N8 1683 aa11.27□□□□□ -0.6
GPATCH8-206ENST00000588554 ZNF772Q68DY9 489 aaPredicted RBP11.27□□□□□ -0.61
GPATCH8-206ENST00000588554 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
GPATCH8-206ENST00000588554 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
GPATCH8-206ENST00000588554 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
GPATCH8-206ENST00000588554 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
GPATCH8-206ENST00000588554 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 C1orf167Q5SNV9 1468 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 ADAMTS2O95450 1211 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 AFF2P51816 1311 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 PPLO60437 1756 aa11.26□□□□□ -0.61
GPATCH8-206ENST00000588554 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
GPATCH8-206ENST00000588554 PLCG2P16885 1265 aa11.25□□□□□ -0.61
GPATCH8-206ENST00000588554 RXRBP28702 533 aa11.25□□□□□ -0.61
GPATCH8-206ENST00000588554 PNPLA6Q8IY17 1366 aa11.25□□□□□ -0.61
GPATCH8-206ENST00000588554 XPCQ01831 940 aaPredicted RBP11.24□□□□□ -0.61
GPATCH8-206ENST00000588554 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
GPATCH8-206ENST00000588554 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
GPATCH8-206ENST00000588554 CCDC144AA2RUR9 1427 aa11.24□□□□□ -0.61
GPATCH8-206ENST00000588554 SPATA31E1Q6ZUB1 1445 aa11.24□□□□□ -0.61
GPATCH8-206ENST00000588554 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
GPATCH8-206ENST00000588554 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
GPATCH8-206ENST00000588554 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
GPATCH8-206ENST00000588554 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
GPATCH8-206ENST00000588554 PLEKHH1Q9ULM0 1364 aa11.23□□□□□ -0.61
GPATCH8-206ENST00000588554 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
GPATCH8-206ENST00000588554 FOXO3O43524 673 aa11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
GPATCH8-206ENST00000588554 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
GPATCH8-206ENST00000588554 CFAP70Q5T0N1 1121 aa11.2□□□□□ -0.62
GPATCH8-206ENST00000588554 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
GPATCH8-206ENST00000588554 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
GPATCH8-206ENST00000588554 PRAG1Q86YV5 1406 aa11.18□□□□□ -0.62
GPATCH8-206ENST00000588554 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
GPATCH8-206ENST00000588554 ANKRD30BQ9BXX2 1392 aa11.18□□□□□ -0.62
GPATCH8-206ENST00000588554 SAFB2Q14151 953 aaKnown RBP eCLIP11.18□□□□□ -0.62
GPATCH8-206ENST00000588554 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
GPATCH8-206ENST00000588554 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
GPATCH8-206ENST00000588554 C14orf93Q9H972 538 aaKnown RBP11.17□□□□□ -0.62
GPATCH8-206ENST00000588554 USP21Q9UK80 565 aa11.17□□□□□ -0.62
GPATCH8-206ENST00000588554 PIK3C2GO75747 1445 aa11.17□□□□□ -0.62
GPATCH8-206ENST00000588554 LAMC1P11047 1609 aa11.17□□□□□ -0.62
GPATCH8-206ENST00000588554 ABCC11Q96J66 1382 aa11.16□□□□□ -0.62
GPATCH8-206ENST00000588554 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
GPATCH8-206ENST00000588554 RBM6P78332 1123 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-206ENST00000588554 RGS12O14924 1447 aa11.16□□□□□ -0.62
GPATCH8-206ENST00000588554 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-206ENST00000588554 PXDNQ92626 1479 aa11.15□□□□□ -0.62
GPATCH8-206ENST00000588554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
GPATCH8-206ENST00000588554 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
GPATCH8-206ENST00000588554 TECPR2O15040 1411 aa11.15□□□□□ -0.62
GPATCH8-206ENST00000588554 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
GPATCH8-206ENST00000588554 NPHP3Q7Z494 1330 aa11.14□□□□□ -0.63
GPATCH8-206ENST00000588554 FNBP4Q8N3X1 1017 aaPredicted RBP11.14□□□□□ -0.63
GPATCH8-206ENST00000588554 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
GPATCH8-206ENST00000588554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
GPATCH8-206ENST00000588554 KRT28Q7Z3Y7 464 aa11.13□□□□□ -0.63
GPATCH8-206ENST00000588554 CABLES1Q8TDN4 633 aa11.13□□□□□ -0.63
GPATCH8-206ENST00000588554 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
GPATCH8-206ENST00000588554 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
GPATCH8-206ENST00000588554 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
GPATCH8-206ENST00000588554 HIRIP3Q9BW71 556 aaPredicted RBP11.12□□□□□ -0.63
GPATCH8-206ENST00000588554 TRPC5Q9UL62 973 aaPredicted RBP11.12□□□□□ -0.63
GPATCH8-206ENST00000588554 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
GPATCH8-206ENST00000588554 COL22A1Q8NFW1 1626 aaPredicted RBP11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 SIRT1Q96EB6 747 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 TRAK1Q9UPV9 953 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 MYOM2P54296 1465 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 BCL9LQ86UU0 1499 aa11.11□□□□□ -0.63
GPATCH8-206ENST00000588554 SPATA31A3Q5VYP0 1347 aa11.1□□□□□ -0.63
GPATCH8-206ENST00000588554 FMN2Q9NZ56 1722 aa11.1□□□□□ -0.63
GPATCH8-206ENST00000588554 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
GPATCH8-206ENST00000588554 POGKQ9P215 609 aa11.1□□□□□ -0.63
GPATCH8-206ENST00000588554 RGPD8O14715 1765 aaPredicted RBP11.1□□□□□ -0.63
GPATCH8-206ENST00000588554 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
GPATCH8-206ENST00000588554 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
GPATCH8-206ENST00000588554 ATRNO75882 1429 aa11.09□□□□□ -0.63
GPATCH8-206ENST00000588554 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
GPATCH8-206ENST00000588554 PSME1Q06323 249 aa11.08□□□□□ -0.64
GPATCH8-206ENST00000588554 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
GPATCH8-206ENST00000588554 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
GPATCH8-206ENST00000588554 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
GPATCH8-206ENST00000588554 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
GPATCH8-206ENST00000588554 ADGRB1O14514 1584 aa11.06□□□□□ -0.64
GPATCH8-206ENST00000588554 PRR36Q9H6K5 1346 aa11.06□□□□□ -0.64
GPATCH8-206ENST00000588554 ACIN1Q9UKV3 1341 aaKnown RBP11.06□□□□□ -0.64
GPATCH8-206ENST00000588554 USP32Q8NFA0 1604 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms