RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 BTG4Q9NY30 223 aa24.52■■□□□ 1.52
LINC01842-201ENST00000588275 COL14A1Q05707 1796 aaKnown RBP24.51■■□□□ 1.51
LINC01842-201ENST00000588275 KRT27Q7Z3Y8 459 aa24.5■■□□□ 1.51
LINC01842-201ENST00000588275 SRCAPQ6ZRS2 3230 aa24.5■■□□□ 1.51
LINC01842-201ENST00000588275 HRCP23327 699 aa24.49■■□□□ 1.51
LINC01842-201ENST00000588275 DEFB132Q7Z7B7 95 aa24.49■■□□□ 1.51
LINC01842-201ENST00000588275 ATP7BP35670 1465 aa24.49■■□□□ 1.51
LINC01842-201ENST00000588275 FAM98CQ17RN3 349 aaKnown RBP24.48■■□□□ 1.51
LINC01842-201ENST00000588275 CRYBG1Q9Y4K1 1723 aa24.47■■□□□ 1.51
LINC01842-201ENST00000588275 NUDT16Q96DE0 195 aaKnown RBP24.47■■□□□ 1.51
LINC01842-201ENST00000588275 ONECUT3O60422 494 aaPredicted RBP24.46■■□□□ 1.51
LINC01842-201ENST00000588275 PRDM11Q9NQV5 511 aa24.45■■□□□ 1.5
LINC01842-201ENST00000588275 CDK19Q9BWU1 502 aa24.43■■□□□ 1.5
LINC01842-201ENST00000588275 NUTM2GQ5VZR2 741 aa24.41■■□□□ 1.5
LINC01842-201ENST00000588275 PHRF1Q9P1Y6 1649 aaKnown RBP24.41■■□□□ 1.5
LINC01842-201ENST00000588275 KIAA1210Q9ULL0 1709 aa24.41■■□□□ 1.5
LINC01842-201ENST00000588275 TOPAZ1Q8N9V7 1692 aa24.4■■□□□ 1.5
LINC01842-201ENST00000588275 KIAA0232Q92628 1395 aa24.39■■□□□ 1.49
LINC01842-201ENST00000588275 SPATA31A5Q5VU36 1347 aa24.38■■□□□ 1.49
LINC01842-201ENST00000588275 SPATA31A7Q8IWB4 1347 aa24.38■■□□□ 1.49
LINC01842-201ENST00000588275 CHRNA2Q15822 529 aa24.38■■□□□ 1.49
LINC01842-201ENST00000588275 FAM182BQ5T319 152 aa24.37■■□□□ 1.49
LINC01842-201ENST00000588275 STRN4Q9NRL3 753 aa24.37■■□□□ 1.49
LINC01842-201ENST00000588275 ACEP12821 1306 aa24.36■■□□□ 1.49
LINC01842-201ENST00000588275 BAG6P46379 1132 aa24.36■■□□□ 1.49
LINC01842-201ENST00000588275 ZC3H6P61129 1189 aaKnown RBP24.36■■□□□ 1.49
LINC01842-201ENST00000588275 NBPF1Q3BBV0 1214 aa24.36■■□□□ 1.49
LINC01842-201ENST00000588275 CCDC61Q9Y6R9 512 aa24.35■■□□□ 1.49
LINC01842-201ENST00000588275 THSD7AQ9UPZ6 1657 aa24.34■■□□□ 1.49
LINC01842-201ENST00000588275 POLR3AO14802 1390 aaPredicted RBP24.34■■□□□ 1.49
LINC01842-201ENST00000588275 RGPD1P0DJD0 1748 aa24.33■■□□□ 1.49
LINC01842-201ENST00000588275 NBPF8Q3BBV2 869 aa24.33■■□□□ 1.49
LINC01842-201ENST00000588275 SRPK2P78362 688 aaKnown RBP24.32■■□□□ 1.48
LINC01842-201ENST00000588275 NRKQ7Z2Y5 1582 aa24.3■■□□□ 1.48
LINC01842-201ENST00000588275 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
LINC01842-201ENST00000588275 USP35Q9P2H5 1018 aa24.3■■□□□ 1.48
LINC01842-201ENST00000588275 SPATA31A1Q5TZJ5 1347 aa24.3■■□□□ 1.48
LINC01842-201ENST00000588275 CENPJQ9HC77 1338 aaPredicted RBP24.3■■□□□ 1.48
LINC01842-201ENST00000588275 PPIP5K1Q6PFW1 1433 aa24.29■■□□□ 1.48
LINC01842-201ENST00000588275 PLEKHG3A1L390 1219 aa24.29■■□□□ 1.48
LINC01842-201ENST00000588275 PSDA5PKW4 1024 aaPredicted RBP24.29■■□□□ 1.48
LINC01842-201ENST00000588275 EN1Q05925 392 aaPredicted RBP24.29■■□□□ 1.48
LINC01842-201ENST00000588275 QRICH2Q9H0J4 1663 aa24.28■■□□□ 1.48
LINC01842-201ENST00000588275 EVA1CP58658 441 aa24.28■■□□□ 1.48
LINC01842-201ENST00000588275 CABP2Q9NPB3 220 aa24.28■■□□□ 1.48
LINC01842-201ENST00000588275 TNS1Q9HBL0 1735 aaKnown RBP24.25■■□□□ 1.47
LINC01842-201ENST00000588275 SSH2Q76I76 1423 aa24.25■■□□□ 1.47
LINC01842-201ENST00000588275 CAMTA1Q9Y6Y1 1673 aa24.22■■□□□ 1.47
LINC01842-201ENST00000588275 ZBTB7CA1YPR0 619 aa24.22■■□□□ 1.47
LINC01842-201ENST00000588275 LRP5O75197 1615 aa24.21■■□□□ 1.47
LINC01842-201ENST00000588275 USP19O94966 1318 aa24.21■■□□□ 1.47
LINC01842-201ENST00000588275 LARP1Q6PKG0 1096 aaKnown RBP24.21■■□□□ 1.47
LINC01842-201ENST00000588275 NLRP13Q86W25 1043 aa24.21■■□□□ 1.47
LINC01842-201ENST00000588275 TRIM37O94972 964 aa24.2■■□□□ 1.46
LINC01842-201ENST00000588275 LMO7Q8WWI1 1683 aa24.2■■□□□ 1.46
LINC01842-201ENST00000588275 CPDO75976 1380 aa24.19■■□□□ 1.46
LINC01842-201ENST00000588275 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
LINC01842-201ENST00000588275 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
LINC01842-201ENST00000588275 GCP02774 474 aa24.18■■□□□ 1.46
LINC01842-201ENST00000588275 PDE3BQ13370 1112 aa24.18■■□□□ 1.46
LINC01842-201ENST00000588275 EZH2Q15910 746 aaKnown RBP24.18■■□□□ 1.46
LINC01842-201ENST00000588275 CABP1Q9NZU7 370 aa24.18■■□□□ 1.46
LINC01842-201ENST00000588275 DISP2A7MBM2 1401 aa24.18■■□□□ 1.46
LINC01842-201ENST00000588275 R3HDM1Q15032 1099 aaKnown RBP24.17■■□□□ 1.46
LINC01842-201ENST00000588275 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
LINC01842-201ENST00000588275 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
LINC01842-201ENST00000588275 SIN3AQ96ST3 1273 aa24.16■■□□□ 1.46
LINC01842-201ENST00000588275 TRPM1Q7Z4N2 1603 aa24.16■■□□□ 1.46
LINC01842-201ENST00000588275 USP6P35125 1406 aa24.16■■□□□ 1.46
LINC01842-201ENST00000588275 APBA3O96018 575 aa24.14■■□□□ 1.45
LINC01842-201ENST00000588275 NLRP6P59044 892 aa24.14■■□□□ 1.45
LINC01842-201ENST00000588275 NEUROD1Q13562 356 aa24.14■■□□□ 1.45
LINC01842-201ENST00000588275 BRD4O60885 1362 aaPredicted RBP24.14■■□□□ 1.45
LINC01842-201ENST00000588275 COL5A2P05997 1499 aaPredicted RBP24.13■■□□□ 1.45
LINC01842-201ENST00000588275 EVC2Q86UK5 1308 aa24.12■■□□□ 1.45
LINC01842-201ENST00000588275 ROCK2O75116 1388 aaKnown RBP24.12■■□□□ 1.45
LINC01842-201ENST00000588275 CAMKK2Q96RR4 588 aa24.1■■□□□ 1.45
LINC01842-201ENST00000588275 THRAP3Q9Y2W1 955 aaKnown RBP24.1■■□□□ 1.45
LINC01842-201ENST00000588275 PIK3C2AO00443 1686 aa24.1■■□□□ 1.45
LINC01842-201ENST00000588275 SLIT3O75094 1523 aa24.1■■□□□ 1.45
LINC01842-201ENST00000588275 PARP4Q9UKK3 1724 aaKnown RBP24.09■■□□□ 1.45
LINC01842-201ENST00000588275 CRB1P82279 1406 aa24.09■■□□□ 1.45
LINC01842-201ENST00000588275 PARD3Q8TEW0 1356 aa24.06■■□□□ 1.44
LINC01842-201ENST00000588275 RREB1Q92766 1687 aa24.05■■□□□ 1.44
LINC01842-201ENST00000588275 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
LINC01842-201ENST00000588275 SOX12O15370 315 aa24.05■■□□□ 1.44
LINC01842-201ENST00000588275 TOM1L2Q6ZVM7 507 aa24.05■■□□□ 1.44
LINC01842-201ENST00000588275 AKAP12Q02952 1782 aa24.04■■□□□ 1.44
LINC01842-201ENST00000588275 NUP188Q5SRE5 1749 aa24.04■■□□□ 1.44
LINC01842-201ENST00000588275 LRRC37A3O60309 1634 aa24.02■■□□□ 1.44
LINC01842-201ENST00000588275 TTC21BQ7Z4L5 1316 aa24.02■■□□□ 1.44
LINC01842-201ENST00000588275 COL18A1P39060 1754 aa24.01■■□□□ 1.43
LINC01842-201ENST00000588275 OVOS2A0A0G2JMS6 1433 aa24.01■■□□□ 1.43
LINC01842-201ENST00000588275 OVOS2A0A0J9YW53 1432 aa24.01■■□□□ 1.43
LINC01842-201ENST00000588275 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
LINC01842-201ENST00000588275 OVOS2Q6IE36 1432 aa24.01■■□□□ 1.43
LINC01842-201ENST00000588275 ZNF692Q9BU19 519 aaPredicted RBP24■■□□□ 1.43
LINC01842-201ENST00000588275 WNK3Q9BYP7 1800 aa23.99■■□□□ 1.43
LINC01842-201ENST00000588275 DDB1Q16531 1140 aa23.99■■□□□ 1.43
LINC01842-201ENST00000588275 NBPF14Q5TI25 921 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms