RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ADGRB1O14514 1584 aa22.98■■□□□ 1.27
NCLN-203ENST00000587740 SPATA31A5Q5VU36 1347 aa22.98■■□□□ 1.27
NCLN-203ENST00000587740 SPATA31A7Q8IWB4 1347 aa22.98■■□□□ 1.27
NCLN-203ENST00000587740 TRAK1Q9UPV9 953 aa22.97■■□□□ 1.27
NCLN-203ENST00000587740 CRYBG1Q9Y4K1 1723 aa22.96■■□□□ 1.27
NCLN-203ENST00000587740 RGPD1P0DJD0 1748 aa22.95■■□□□ 1.26
NCLN-203ENST00000587740 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
NCLN-203ENST00000587740 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
NCLN-203ENST00000587740 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
NCLN-203ENST00000587740 TULP4Q9NRJ4 1543 aa22.92■■□□□ 1.26
NCLN-203ENST00000587740 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
NCLN-203ENST00000587740 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
NCLN-203ENST00000587740 R3HDM1Q15032 1099 aaKnown RBP22.92■■□□□ 1.26
NCLN-203ENST00000587740 DISP2A7MBM2 1401 aa22.91■■□□□ 1.26
NCLN-203ENST00000587740 EZH2Q15910 746 aaKnown RBP22.9■■□□□ 1.26
NCLN-203ENST00000587740 PRDM11Q9NQV5 511 aa22.9■■□□□ 1.26
NCLN-203ENST00000587740 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.25
NCLN-203ENST00000587740 NGDNQ8NEJ9 315 aaKnown RBP22.88■■□□□ 1.25
NCLN-203ENST00000587740 EIF3AQ14152 1382 aaKnown RBP22.88■■□□□ 1.25
NCLN-203ENST00000587740 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
NCLN-203ENST00000587740 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
NCLN-203ENST00000587740 CAMKK2Q96RR4 588 aa22.87■■□□□ 1.25
NCLN-203ENST00000587740 KDM2AQ9Y2K7 1162 aa22.86■■□□□ 1.25
NCLN-203ENST00000587740 KIAA0232Q92628 1395 aa22.86■■□□□ 1.25
NCLN-203ENST00000587740 TRIM37O94972 964 aa22.85■■□□□ 1.25
NCLN-203ENST00000587740 STRN4Q9NRL3 753 aa22.83■■□□□ 1.25
NCLN-203ENST00000587740 ATP7BP35670 1465 aa22.82■■□□□ 1.24
NCLN-203ENST00000587740 FAM196AQ6ZSG2 479 aa22.82■■□□□ 1.24
NCLN-203ENST00000587740 DCAF11Q8TEB1 546 aa22.82■■□□□ 1.24
NCLN-203ENST00000587740 NUDT16Q96DE0 195 aaKnown RBP22.82■■□□□ 1.24
NCLN-203ENST00000587740 PHRF1Q9P1Y6 1649 aaKnown RBP22.81■■□□□ 1.24
NCLN-203ENST00000587740 ZC3H6P61129 1189 aaKnown RBP22.8■■□□□ 1.24
NCLN-203ENST00000587740 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
NCLN-203ENST00000587740 APBA3O96018 575 aa22.79■■□□□ 1.24
NCLN-203ENST00000587740 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
NCLN-203ENST00000587740 ARHGEF28Q8N1W1 1705 aaKnown RBP22.78■■□□□ 1.24
NCLN-203ENST00000587740 USP35Q9P2H5 1018 aa22.78■■□□□ 1.24
NCLN-203ENST00000587740 ITSN1Q15811 1721 aa22.77■■□□□ 1.24
NCLN-203ENST00000587740 BARGINQ6ZT62 677 aa22.76■■□□□ 1.23
NCLN-203ENST00000587740 SSH2Q76I76 1423 aa22.75■■□□□ 1.23
NCLN-203ENST00000587740 CDK19Q9BWU1 502 aa22.75■■□□□ 1.23
NCLN-203ENST00000587740 PARD3Q8TEW0 1356 aa22.75■■□□□ 1.23
NCLN-203ENST00000587740 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
NCLN-203ENST00000587740 RREB1Q92766 1687 aa22.74■■□□□ 1.23
NCLN-203ENST00000587740 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
NCLN-203ENST00000587740 NBPF8Q3BBV2 869 aa22.73■■□□□ 1.23
NCLN-203ENST00000587740 LARP1Q6PKG0 1096 aaKnown RBP22.73■■□□□ 1.23
NCLN-203ENST00000587740 ACEP12821 1306 aa22.73■■□□□ 1.23
NCLN-203ENST00000587740 NUP188Q5SRE5 1749 aa22.72■■□□□ 1.23
NCLN-203ENST00000587740 EVA1CP58658 441 aa22.72■■□□□ 1.23
NCLN-203ENST00000587740 STAC3Q96MF2 364 aa22.72■■□□□ 1.23
NCLN-203ENST00000587740 PDE3BQ13370 1112 aa22.71■■□□□ 1.23
NCLN-203ENST00000587740 NRKQ7Z2Y5 1582 aa22.71■■□□□ 1.23
NCLN-203ENST00000587740 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
NCLN-203ENST00000587740 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
NCLN-203ENST00000587740 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
NCLN-203ENST00000587740 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
NCLN-203ENST00000587740 CCDC61Q9Y6R9 512 aa22.69■■□□□ 1.22
NCLN-203ENST00000587740 CPDO75976 1380 aa22.68■■□□□ 1.22
NCLN-203ENST00000587740 USP19O94966 1318 aa22.67■■□□□ 1.22
NCLN-203ENST00000587740 ABTB2Q8N961 1025 aa22.67■■□□□ 1.22
NCLN-203ENST00000587740 NBPF14Q5TI25 921 aa22.64■■□□□ 1.21
NCLN-203ENST00000587740 GCP02774 474 aa22.63■■□□□ 1.21
NCLN-203ENST00000587740 THRAP3Q9Y2W1 955 aaKnown RBP22.63■■□□□ 1.21
NCLN-203ENST00000587740 YY1P25490 414 aa22.62■■□□□ 1.21
NCLN-203ENST00000587740 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
NCLN-203ENST00000587740 COL5A2P05997 1499 aaPredicted RBP22.61■■□□□ 1.21
NCLN-203ENST00000587740 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
NCLN-203ENST00000587740 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
NCLN-203ENST00000587740 SPON1Q9HCB6 807 aa22.59■■□□□ 1.21
NCLN-203ENST00000587740 PEAK1Q9H792 1746 aa22.59■■□□□ 1.21
NCLN-203ENST00000587740 KCNQ2O43526 872 aa22.58■■□□□ 1.21
NCLN-203ENST00000587740 CRB1P82279 1406 aa22.57■■□□□ 1.2
NCLN-203ENST00000587740 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
NCLN-203ENST00000587740 PTF1AQ7RTS3 328 aa22.56■■□□□ 1.2
NCLN-203ENST00000587740 SBF2Q86WG5 1849 aa22.56■■□□□ 1.2
NCLN-203ENST00000587740 KIAA1210Q9ULL0 1709 aa22.56■■□□□ 1.2
NCLN-203ENST00000587740 CABP2Q9NPB3 220 aa22.55■■□□□ 1.2
NCLN-203ENST00000587740 PPP1R1BQ9UD71 204 aaPredicted RBP22.55■■□□□ 1.2
NCLN-203ENST00000587740 SRPK2P78362 688 aaKnown RBP22.54■■□□□ 1.2
NCLN-203ENST00000587740 ANO8Q9HCE9 1232 aaPredicted RBP22.54■■□□□ 1.2
NCLN-203ENST00000587740 OVOS2A0A0G2JMS6 1433 aa22.54■■□□□ 1.2
NCLN-203ENST00000587740 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
NCLN-203ENST00000587740 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
NCLN-203ENST00000587740 PLSCR1O15162 318 aa22.53■■□□□ 1.2
NCLN-203ENST00000587740 AATKQ6ZMQ8 1374 aa22.52■■□□□ 1.2
NCLN-203ENST00000587740 NINLQ9Y2I6 1382 aa22.52■■□□□ 1.2
NCLN-203ENST00000587740 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
NCLN-203ENST00000587740 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
NCLN-203ENST00000587740 LRRC37A3O60309 1634 aa22.52■■□□□ 1.2
NCLN-203ENST00000587740 RGPD3A6NKT7 1758 aaPredicted RBP22.51■■□□□ 1.19
NCLN-203ENST00000587740 RGPD4Q7Z3J3 1758 aa22.51■■□□□ 1.19
NCLN-203ENST00000587740 NLRP6P59044 892 aa22.51■■□□□ 1.19
NCLN-203ENST00000587740 PROM2Q8N271 834 aa22.51■■□□□ 1.19
NCLN-203ENST00000587740 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
NCLN-203ENST00000587740 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
NCLN-203ENST00000587740 COL18A1P39060 1754 aa22.5■■□□□ 1.19
NCLN-203ENST00000587740 USP6P35125 1406 aa22.5■■□□□ 1.19
NCLN-203ENST00000587740 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
NCLN-203ENST00000587740 CABP1Q9NZU7 370 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms