RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 SKOR2Q2VWA4 1001 aaPredicted RBP16.41■□□□□ 0.22
PTPRS-204ENST00000587303 MPHOSPH8Q99549 860 aa16.41■□□□□ 0.22
PTPRS-204ENST00000587303 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■■■■ 35.5
PTPRS-204ENST00000587303 PLCD4Q9BRC7 762 aa16.41■□□□□ 0.22
PTPRS-204ENST00000587303 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
PTPRS-204ENST00000587303 MYL6BP14649 208 aa16.4■□□□□ 0.22
PTPRS-204ENST00000587303 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
PTPRS-204ENST00000587303 CAGE1Q8TC20 777 aa16.4■□□□□ 0.22
PTPRS-204ENST00000587303 PSMA5P28066 241 aa16.4■□□□□ 0.22
PTPRS-204ENST00000587303 IFT57Q9NWB7 429 aa16.39■□□□□ 0.21
PTPRS-204ENST00000587303 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
PTPRS-204ENST00000587303 MTHFSP49914 203 aa16.39■□□□□ 0.21
PTPRS-204ENST00000587303 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
PTPRS-204ENST00000587303 AK7Q96M32 723 aa16.39■□□□□ 0.21
PTPRS-204ENST00000587303 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
PTPRS-204ENST00000587303 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
PTPRS-204ENST00000587303 MAP7D2Q96T17 732 aa16.38■□□□□ 0.21
PTPRS-204ENST00000587303 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■■□ 21
PTPRS-204ENST00000587303 GNAI3P08754 354 aa16.38■□□□□ 0.21
PTPRS-204ENST00000587303 STAC3Q96MF2 364 aa16.37■□□□□ 0.21
PTPRS-204ENST00000587303 CFAP70Q5T0N1 1121 aa16.37■□□□□ 0.21
PTPRS-204ENST00000587303 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
PTPRS-204ENST00000587303 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
PTPRS-204ENST00000587303 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
PTPRS-204ENST00000587303 SYCP1Q15431 976 aa16.36■□□□□ 0.21
PTPRS-204ENST00000587303 MNS1Q8NEH6 495 aa16.36■□□□□ 0.21
PTPRS-204ENST00000587303 SIL1Q9H173 461 aa16.36■□□□□ 0.21
PTPRS-204ENST00000587303 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
PTPRS-204ENST00000587303 CDK19Q9BWU1 502 aa16.36■□□□□ 0.21
PTPRS-204ENST00000587303 RDXP35241 583 aaKnown RBP16.35■□□□□ 0.21
PTPRS-204ENST00000587303 TXLNAP40222 546 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 ZHX3Q9H4I2 956 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 ANKRD62A6NC57 917 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 CCDC173Q0VFZ6 552 aa16.35■□□□□ 0.21
PTPRS-204ENST00000587303 NACAP1Q9BZK3 213 aa16.34■□□□□ 0.21
PTPRS-204ENST00000587303 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
PTPRS-204ENST00000587303 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
PTPRS-204ENST00000587303 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
PTPRS-204ENST00000587303 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
PTPRS-204ENST00000587303 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.21
PTPRS-204ENST00000587303 SDF4Q9BRK5 362 aa16.33■□□□□ 0.21
PTPRS-204ENST00000587303 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.21
PTPRS-204ENST00000587303 ADAMTS2O95450 1211 aa16.33■□□□□ 0.21
PTPRS-204ENST00000587303 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
PTPRS-204ENST00000587303 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
PTPRS-204ENST00000587303 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
PTPRS-204ENST00000587303 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
PTPRS-204ENST00000587303 CDR1P51861 262 aa16.32■□□□□ 0.2
PTPRS-204ENST00000587303 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
PTPRS-204ENST00000587303 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
PTPRS-204ENST00000587303 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
PTPRS-204ENST00000587303 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
PTPRS-204ENST00000587303 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
PTPRS-204ENST00000587303 HIP1O00291 1037 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
PTPRS-204ENST00000587303 NEFHP12036 1026 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
PTPRS-204ENST00000587303 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 CDC45O75419 566 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
PTPRS-204ENST00000587303 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
PTPRS-204ENST00000587303 MATR3P43243 847 aaKnown RBP eCLIP16.31■□□□□ 0.23e-9■■■□□ 18.4
PTPRS-204ENST00000587303 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
PTPRS-204ENST00000587303 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
PTPRS-204ENST00000587303 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
PTPRS-204ENST00000587303 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
PTPRS-204ENST00000587303 NAT10Q9H0A0 1025 aaKnown RBP16.3■□□□□ 0.2
PTPRS-204ENST00000587303 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
PTPRS-204ENST00000587303 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
PTPRS-204ENST00000587303 ZPR1O75312 459 aa16.3■□□□□ 0.2
PTPRS-204ENST00000587303 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
PTPRS-204ENST00000587303 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
PTPRS-204ENST00000587303 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
PTPRS-204ENST00000587303 GNAI2P04899 355 aa16.29■□□□□ 0.2
PTPRS-204ENST00000587303 FKBP4Q02790 459 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTPRS-204ENST00000587303 CCDC97Q96F63 343 aaPredicted RBP16.29■□□□□ 0.2
PTPRS-204ENST00000587303 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
PTPRS-204ENST00000587303 PPM1FP49593 454 aaPredicted RBP16.29■□□□□ 0.2
PTPRS-204ENST00000587303 GSE1Q14687 1217 aa16.29■□□□□ 0.2
PTPRS-204ENST00000587303 IGHMBP2P38935 993 aaKnown RBP16.28■□□□□ 0.2
PTPRS-204ENST00000587303 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 CCDC85AQ96PX6 553 aaPredicted RBP16.28■□□□□ 0.2
PTPRS-204ENST00000587303 BTBD11A6QL63 1104 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 ZNF76P36508 570 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 H0YHG0 523 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 NUCB2P80303 420 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
PTPRS-204ENST00000587303 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
PTPRS-204ENST00000587303 HSP90B2PQ58FF3 399 aa16.27■□□□□ 0.2
PTPRS-204ENST00000587303 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
PTPRS-204ENST00000587303 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
PTPRS-204ENST00000587303 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.2
PTPRS-204ENST00000587303 SMC2O95347 1197 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms