RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
CALR-203ENST00000586803 CCDC61Q9Y6R9 512 aa18.95■□□□□ 0.62
CALR-203ENST00000586803 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
CALR-203ENST00000586803 LMOD2Q6P5Q4 547 aa18.94■□□□□ 0.62
CALR-203ENST00000586803 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
CALR-203ENST00000586803 PIK3C2AO00443 1686 aa18.94■□□□□ 0.62
CALR-203ENST00000586803 FNBP4Q8N3X1 1017 aaPredicted RBP18.93■□□□□ 0.62
CALR-203ENST00000586803 USP21Q9UK80 565 aa18.93■□□□□ 0.62
CALR-203ENST00000586803 ACEP12821 1306 aa18.93■□□□□ 0.62
CALR-203ENST00000586803 GLI3P10071 1580 aa18.93■□□□□ 0.62
CALR-203ENST00000586803 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CALR-203ENST00000586803 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
CALR-203ENST00000586803 PLEKHG3A1L390 1219 aa18.92■□□□□ 0.62
CALR-203ENST00000586803 RXRBP28702 533 aa18.92■□□□□ 0.62
CALR-203ENST00000586803 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
CALR-203ENST00000586803 USP6P35125 1406 aa18.91■□□□□ 0.62
CALR-203ENST00000586803 CABP2Q9NPB3 220 aa18.91■□□□□ 0.62
CALR-203ENST00000586803 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
CALR-203ENST00000586803 RBM6P78332 1123 aaKnown RBP18.9■□□□□ 0.62
CALR-203ENST00000586803 TRPC5Q9UL62 973 aaPredicted RBP18.9■□□□□ 0.62
CALR-203ENST00000586803 PAK3O75914 559 aaPredicted RBP18.89■□□□□ 0.61
CALR-203ENST00000586803 CABLES1Q8TDN4 633 aa18.88■□□□□ 0.61
CALR-203ENST00000586803 QTRT2Q9H974 415 aaKnown RBP18.88■□□□□ 0.61
CALR-203ENST00000586803 SLIT3O75094 1523 aa18.88■□□□□ 0.61
CALR-203ENST00000586803 LMO7Q8WWI1 1683 aa18.87■□□□□ 0.61
CALR-203ENST00000586803 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
CALR-203ENST00000586803 USP19O94966 1318 aa18.84■□□□□ 0.61
CALR-203ENST00000586803 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
CALR-203ENST00000586803 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
CALR-203ENST00000586803 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
CALR-203ENST00000586803 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
CALR-203ENST00000586803 USP47Q96K76 1375 aa18.83■□□□□ 0.61
CALR-203ENST00000586803 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
CALR-203ENST00000586803 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
CALR-203ENST00000586803 CD163L1Q9NR16 1453 aa18.81■□□□□ 0.6
CALR-203ENST00000586803 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
CALR-203ENST00000586803 MYOM1P52179 1685 aa18.8■□□□□ 0.6
CALR-203ENST00000586803 THSD7AQ9UPZ6 1657 aa18.8■□□□□ 0.6
CALR-203ENST00000586803 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
CALR-203ENST00000586803 CPDO75976 1380 aa18.79■□□□□ 0.6
CALR-203ENST00000586803 WNK3Q9BYP7 1800 aa18.79■□□□□ 0.6
CALR-203ENST00000586803 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
CALR-203ENST00000586803 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
CALR-203ENST00000586803 PRDM11Q9NQV5 511 aa18.78■□□□□ 0.6
CALR-203ENST00000586803 ABCC6O95255 1503 aa18.78■□□□□ 0.6
CALR-203ENST00000586803 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
CALR-203ENST00000586803 VPS72Q15906 364 aa18.77■□□□□ 0.6
CALR-203ENST00000586803 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
CALR-203ENST00000586803 EP400Q96L91 3159 aa18.77■□□□□ 0.6
CALR-203ENST00000586803 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
CALR-203ENST00000586803 NFAT5O94916 1531 aa18.76■□□□□ 0.59
CALR-203ENST00000586803 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
CALR-203ENST00000586803 LTN1O94822 1766 aa18.76■□□□□ 0.59
CALR-203ENST00000586803 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
CALR-203ENST00000586803 ST20-MTHFSA0A0A6YYL1 179 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 SLC24A1O60721 1099 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 PUS7Q96PZ0 661 aaKnown RBP18.75■□□□□ 0.59
CALR-203ENST00000586803 TESK2Q96S53 571 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
CALR-203ENST00000586803 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 COL18A1P39060 1754 aa18.75■□□□□ 0.59
CALR-203ENST00000586803 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
CALR-203ENST00000586803 A0A1W2PP64 1363 aa18.74■□□□□ 0.59
CALR-203ENST00000586803 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
CALR-203ENST00000586803 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
CALR-203ENST00000586803 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
CALR-203ENST00000586803 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
CALR-203ENST00000586803 RGPD5Q99666 1765 aa18.71■□□□□ 0.59
CALR-203ENST00000586803 NLRP6P59044 892 aa18.7■□□□□ 0.58
CALR-203ENST00000586803 ZC3H6P61129 1189 aaKnown RBP18.7■□□□□ 0.58
CALR-203ENST00000586803 HDGFL2Q7Z4V5 671 aaPredicted RBP18.7■□□□□ 0.58
CALR-203ENST00000586803 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.588e-23■■■■□ 22.8
CALR-203ENST00000586803 PARP4Q9UKK3 1724 aaKnown RBP18.7■□□□□ 0.58
CALR-203ENST00000586803 OVOS2A0A0J9YW53 1432 aa18.69■□□□□ 0.58
CALR-203ENST00000586803 OVOS2Q6IE36 1432 aa18.69■□□□□ 0.58
CALR-203ENST00000586803 GCP02774 474 aa18.69■□□□□ 0.58
CALR-203ENST00000586803 CHRNA2Q15822 529 aa18.69■□□□□ 0.58
CALR-203ENST00000586803 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
CALR-203ENST00000586803 TMF1P82094 1093 aa18.68■□□□□ 0.58
CALR-203ENST00000586803 RGPD1P0DJD0 1748 aa18.68■□□□□ 0.58
CALR-203ENST00000586803 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
CALR-203ENST00000586803 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
CALR-203ENST00000586803 USP31Q70CQ4 1352 aa18.68■□□□□ 0.58
CALR-203ENST00000586803 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
CALR-203ENST00000586803 FAM208AQ9UK61 1670 aaKnown RBP18.67■□□□□ 0.58
CALR-203ENST00000586803 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
CALR-203ENST00000586803 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
CALR-203ENST00000586803 AATKQ6ZMQ8 1374 aa18.67■□□□□ 0.58
CALR-203ENST00000586803 TNS1Q9HBL0 1735 aaKnown RBP18.64■□□□□ 0.57
CALR-203ENST00000586803 CDCA8Q53HL2 280 aa18.64■□□□□ 0.57
CALR-203ENST00000586803 SEPT12Q8IYM1 358 aa18.64■□□□□ 0.57
CALR-203ENST00000586803 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
CALR-203ENST00000586803 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
CALR-203ENST00000586803 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
CALR-203ENST00000586803 CRB1P82279 1406 aa18.64■□□□□ 0.57
CALR-203ENST00000586803 A0A0G2JS52 829 aa18.63■□□□□ 0.57
CALR-203ENST00000586803 MYT1Q01538 1121 aa18.63■□□□□ 0.57
CALR-203ENST00000586803 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms