RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 RXRBP28702 533 aa14.73□□□□□ -0.05
SMARCA4-209ENST00000586122 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
SMARCA4-209ENST00000586122 NWD2Q9ULI1 1742 aa14.72□□□□□ -0.05
SMARCA4-209ENST00000586122 USP21Q9UK80 565 aa14.72□□□□□ -0.05
SMARCA4-209ENST00000586122 TRPC5Q9UL62 973 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-209ENST00000586122 CRYBG1Q9Y4K1 1723 aa14.72□□□□□ -0.05
SMARCA4-209ENST00000586122 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-209ENST00000586122 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-209ENST00000586122 SLIT2O94813 1529 aa14.71□□□□□ -0.06
SMARCA4-209ENST00000586122 CCER1Q8TC90 406 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-209ENST00000586122 PUS7Q96PZ0 661 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-209ENST00000586122 QTRT2Q9H974 415 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-209ENST00000586122 ATRNO75882 1429 aa14.69□□□□□ -0.06
SMARCA4-209ENST00000586122 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
SMARCA4-209ENST00000586122 AKAP12Q02952 1782 aa14.69□□□□□ -0.06
SMARCA4-209ENST00000586122 BCL9LQ86UU0 1499 aa14.69□□□□□ -0.06
SMARCA4-209ENST00000586122 PLCH1Q4KWH8 1693 aa14.68□□□□□ -0.06
SMARCA4-209ENST00000586122 USP6P35125 1406 aa14.68□□□□□ -0.06
SMARCA4-209ENST00000586122 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-209ENST00000586122 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
SMARCA4-209ENST00000586122 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
SMARCA4-209ENST00000586122 PHRF1Q9P1Y6 1649 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-209ENST00000586122 UNC5CLQ8IV45 518 aa14.67□□□□□ -0.06
SMARCA4-209ENST00000586122 NINLQ9Y2I6 1382 aa14.66□□□□□ -0.06
SMARCA4-209ENST00000586122 ABTB2Q8N961 1025 aa14.66□□□□□ -0.06
SMARCA4-209ENST00000586122 USP47Q96K76 1375 aa14.65□□□□□ -0.06
SMARCA4-209ENST00000586122 NLRP13Q86W25 1043 aa14.65□□□□□ -0.06
SMARCA4-209ENST00000586122 MON2Q7Z3U7 1717 aa14.65□□□□□ -0.06
SMARCA4-209ENST00000586122 SSH2Q76I76 1423 aa14.65□□□□□ -0.06
SMARCA4-209ENST00000586122 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
SMARCA4-209ENST00000586122 TESK2Q96S53 571 aa14.64□□□□□ -0.07
SMARCA4-209ENST00000586122 CPSF1Q10570 1443 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-209ENST00000586122 USP19O94966 1318 aa14.64□□□□□ -0.07
SMARCA4-209ENST00000586122 TTC21AQ8NDW8 1320 aa14.64□□□□□ -0.07
SMARCA4-209ENST00000586122 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-209ENST00000586122 RGS12O14924 1447 aa14.63□□□□□ -0.07
SMARCA4-209ENST00000586122 NRKQ7Z2Y5 1582 aa14.63□□□□□ -0.07
SMARCA4-209ENST00000586122 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
SMARCA4-209ENST00000586122 FAM83GA6ND36 823 aa14.62□□□□□ -0.07
SMARCA4-209ENST00000586122 VPS72Q15906 364 aa14.62□□□□□ -0.07
SMARCA4-209ENST00000586122 PRDM11Q9NQV5 511 aa14.62□□□□□ -0.07
SMARCA4-209ENST00000586122 CPDO75976 1380 aa14.61□□□□□ -0.07
SMARCA4-209ENST00000586122 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-209ENST00000586122 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
SMARCA4-209ENST00000586122 TMF1P82094 1093 aa14.61□□□□□ -0.07
SMARCA4-209ENST00000586122 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
SMARCA4-209ENST00000586122 PIK3C2AO00443 1686 aa14.61□□□□□ -0.07
SMARCA4-209ENST00000586122 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-209ENST00000586122 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
SMARCA4-209ENST00000586122 SLIT3O75094 1523 aa14.6□□□□□ -0.07
SMARCA4-209ENST00000586122 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
SMARCA4-209ENST00000586122 GLI3P10071 1580 aa14.6□□□□□ -0.07
SMARCA4-209ENST00000586122 KIAA0232Q92628 1395 aa14.6□□□□□ -0.07
SMARCA4-209ENST00000586122 NLRP6P59044 892 aa14.59□□□□□ -0.07
SMARCA4-209ENST00000586122 TMC1Q8TDI8 760 aa14.59□□□□□ -0.07
SMARCA4-209ENST00000586122 USP54Q70EL1 1684 aa14.58□□□□□ -0.07
SMARCA4-209ENST00000586122 CD163L1Q9NR16 1453 aa14.58□□□□□ -0.08
SMARCA4-209ENST00000586122 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.08
SMARCA4-209ENST00000586122 BTG4Q9NY30 223 aa14.58□□□□□ -0.08
SMARCA4-209ENST00000586122 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.08
SMARCA4-209ENST00000586122 GCP02774 474 aa14.57□□□□□ -0.08
SMARCA4-209ENST00000586122 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
SMARCA4-209ENST00000586122 LMO7Q8WWI1 1683 aa14.56□□□□□ -0.08
SMARCA4-209ENST00000586122 USP31Q70CQ4 1352 aa14.56□□□□□ -0.08
SMARCA4-209ENST00000586122 ZC3H6P61129 1189 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-209ENST00000586122 SLC12A5Q9H2X9 1139 aa14.55□□□□□ -0.08
SMARCA4-209ENST00000586122 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-209ENST00000586122 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
SMARCA4-209ENST00000586122 ONECUT3O60422 494 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-209ENST00000586122 ANKRD36BQ8N2N9 1353 aa14.54□□□□□ -0.08
SMARCA4-209ENST00000586122 ABCC6O95255 1503 aa14.54□□□□□ -0.08
SMARCA4-209ENST00000586122 AATKQ6ZMQ8 1374 aa14.53□□□□□ -0.08
SMARCA4-209ENST00000586122 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
SMARCA4-209ENST00000586122 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
SMARCA4-209ENST00000586122 EIF4G2P78344 907 aaKnown RBP eCLIP14.52□□□□□ -0.09
SMARCA4-209ENST00000586122 CHRNA2Q15822 529 aa14.52□□□□□ -0.09
SMARCA4-209ENST00000586122 CAMTA1Q9Y6Y1 1673 aa14.52□□□□□ -0.09
SMARCA4-209ENST00000586122 BRWD3Q6RI45 1802 aa14.51□□□□□ -0.09
SMARCA4-209ENST00000586122 EVA1CP58658 441 aa14.51□□□□□ -0.09
SMARCA4-209ENST00000586122 UPF1Q92900 1129 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMARCA4-209ENST00000586122 NFAT5O94916 1531 aa14.51□□□□□ -0.09
SMARCA4-209ENST00000586122 COL18A1P39060 1754 aa14.5□□□□□ -0.09
SMARCA4-209ENST00000586122 SPATA31A1Q5TZJ5 1347 aa14.5□□□□□ -0.09
SMARCA4-209ENST00000586122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMARCA4-209ENST00000586122 SEPT12Q8IYM1 358 aa14.5□□□□□ -0.09
SMARCA4-209ENST00000586122 COL5A2P05997 1499 aaPredicted RBP14.5□□□□□ -0.09
SMARCA4-209ENST00000586122 THSD7AQ9UPZ6 1657 aa14.49□□□□□ -0.09
SMARCA4-209ENST00000586122 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
SMARCA4-209ENST00000586122 STRN4Q9NRL3 753 aa14.49□□□□□ -0.09
SMARCA4-209ENST00000586122 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
SMARCA4-209ENST00000586122 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
SMARCA4-209ENST00000586122 NME9Q86XW9 330 aa14.48□□□□□ -0.09
SMARCA4-209ENST00000586122 CCDC125Q86Z20 511 aa14.48□□□□□ -0.09
SMARCA4-209ENST00000586122 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-209ENST00000586122 MYOM1P52179 1685 aa14.48□□□□□ -0.09
SMARCA4-209ENST00000586122 BARGINQ6ZT62 677 aa14.47□□□□□ -0.09
SMARCA4-209ENST00000586122 CRB1P82279 1406 aa14.47□□□□□ -0.09
SMARCA4-209ENST00000586122 LTN1O94822 1766 aa14.47□□□□□ -0.09
SMARCA4-209ENST00000586122 A0A0G2JS52 829 aa14.46□□□□□ -0.09
SMARCA4-209ENST00000586122 MYT1Q01538 1121 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms