RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GPRASP1Q5JY77 1395 aa17.05■□□□□ 0.32
LIG3-207ENST00000586119 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
LIG3-207ENST00000586119 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
LIG3-207ENST00000586119 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
LIG3-207ENST00000586119 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
LIG3-207ENST00000586119 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.32
LIG3-207ENST00000586119 CHRNA2Q15822 529 aa17.02■□□□□ 0.32
LIG3-207ENST00000586119 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
LIG3-207ENST00000586119 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
LIG3-207ENST00000586119 COL14A1Q05707 1796 aaKnown RBP17.01■□□□□ 0.31
LIG3-207ENST00000586119 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
LIG3-207ENST00000586119 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
LIG3-207ENST00000586119 PSDA5PKW4 1024 aaPredicted RBP17■□□□□ 0.31
LIG3-207ENST00000586119 NBPF1Q3BBV0 1214 aa17■□□□□ 0.31
LIG3-207ENST00000586119 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
LIG3-207ENST00000586119 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
LIG3-207ENST00000586119 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
LIG3-207ENST00000586119 ATP7BP35670 1465 aa16.99■□□□□ 0.31
LIG3-207ENST00000586119 HRCP23327 699 aa16.98■□□□□ 0.31
LIG3-207ENST00000586119 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
LIG3-207ENST00000586119 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
LIG3-207ENST00000586119 KIAA0232Q92628 1395 aa16.98■□□□□ 0.31
LIG3-207ENST00000586119 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
LIG3-207ENST00000586119 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
LIG3-207ENST00000586119 ACEP12821 1306 aa16.96■□□□□ 0.31
LIG3-207ENST00000586119 BAG6P46379 1132 aa16.95■□□□□ 0.3
LIG3-207ENST00000586119 ITSN1Q15811 1721 aa16.94■□□□□ 0.3
LIG3-207ENST00000586119 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
LIG3-207ENST00000586119 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
LIG3-207ENST00000586119 PHRF1Q9P1Y6 1649 aaKnown RBP16.93■□□□□ 0.3
LIG3-207ENST00000586119 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
LIG3-207ENST00000586119 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
LIG3-207ENST00000586119 PLEKHG3A1L390 1219 aa16.92■□□□□ 0.3
LIG3-207ENST00000586119 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
LIG3-207ENST00000586119 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
LIG3-207ENST00000586119 TRIM37O94972 964 aa16.91■□□□□ 0.3
LIG3-207ENST00000586119 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
LIG3-207ENST00000586119 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
LIG3-207ENST00000586119 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
LIG3-207ENST00000586119 EVA1CP58658 441 aa16.9■□□□□ 0.3
LIG3-207ENST00000586119 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
LIG3-207ENST00000586119 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
LIG3-207ENST00000586119 CAMTA1Q9Y6Y1 1673 aa16.89■□□□□ 0.29
LIG3-207ENST00000586119 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
LIG3-207ENST00000586119 TNS1Q9HBL0 1735 aaKnown RBP16.88■□□□□ 0.29
LIG3-207ENST00000586119 KIAA1210Q9ULL0 1709 aa16.87■□□□□ 0.29
LIG3-207ENST00000586119 SRPK2P78362 688 aaKnown RBP16.87■□□□□ 0.29
LIG3-207ENST00000586119 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
LIG3-207ENST00000586119 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
LIG3-207ENST00000586119 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
LIG3-207ENST00000586119 APBA3O96018 575 aa16.85■□□□□ 0.29
LIG3-207ENST00000586119 FAM196AQ6ZSG2 479 aa16.85■□□□□ 0.29
LIG3-207ENST00000586119 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
LIG3-207ENST00000586119 LRP5O75197 1615 aa16.85■□□□□ 0.29
LIG3-207ENST00000586119 ZBTB7CA1YPR0 619 aa16.84■□□□□ 0.29
LIG3-207ENST00000586119 GCP02774 474 aa16.84■□□□□ 0.29
LIG3-207ENST00000586119 BARGINQ6ZT62 677 aa16.84■□□□□ 0.29
LIG3-207ENST00000586119 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
LIG3-207ENST00000586119 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
LIG3-207ENST00000586119 USP19O94966 1318 aa16.84■□□□□ 0.29
LIG3-207ENST00000586119 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
LIG3-207ENST00000586119 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
LIG3-207ENST00000586119 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
LIG3-207ENST00000586119 LMO7Q8WWI1 1683 aa16.82■□□□□ 0.28
LIG3-207ENST00000586119 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
LIG3-207ENST00000586119 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
LIG3-207ENST00000586119 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
LIG3-207ENST00000586119 CPDO75976 1380 aa16.81■□□□□ 0.28
LIG3-207ENST00000586119 NLRP6P59044 892 aa16.8■□□□□ 0.28
LIG3-207ENST00000586119 QRICH2Q9H0J4 1663 aa16.8■□□□□ 0.28
LIG3-207ENST00000586119 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
LIG3-207ENST00000586119 PTF1AQ7RTS3 328 aa16.77■□□□□ 0.28
LIG3-207ENST00000586119 AXIN2Q9Y2T1 843 aa16.77■□□□□ 0.28
LIG3-207ENST00000586119 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
LIG3-207ENST00000586119 USP6P35125 1406 aa16.77■□□□□ 0.27
LIG3-207ENST00000586119 COL18A1P39060 1754 aa16.75■□□□□ 0.27
LIG3-207ENST00000586119 THRAP3Q9Y2W1 955 aaKnown RBP16.75■□□□□ 0.27
LIG3-207ENST00000586119 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
LIG3-207ENST00000586119 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
LIG3-207ENST00000586119 SOX12O15370 315 aa16.74■□□□□ 0.27
LIG3-207ENST00000586119 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
LIG3-207ENST00000586119 RREB1Q92766 1687 aa16.73■□□□□ 0.27
LIG3-207ENST00000586119 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
LIG3-207ENST00000586119 CRB1P82279 1406 aa16.72■□□□□ 0.27
LIG3-207ENST00000586119 SLIT3O75094 1523 aa16.72■□□□□ 0.27
LIG3-207ENST00000586119 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
LIG3-207ENST00000586119 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
LIG3-207ENST00000586119 SBF2Q86WG5 1849 aa16.72■□□□□ 0.27
LIG3-207ENST00000586119 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
LIG3-207ENST00000586119 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
LIG3-207ENST00000586119 TRPM1Q7Z4N2 1603 aa16.71■□□□□ 0.27
LIG3-207ENST00000586119 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
LIG3-207ENST00000586119 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
LIG3-207ENST00000586119 ARHGEF25Q86VW2 580 aa16.7■□□□□ 0.26
LIG3-207ENST00000586119 PARD3Q8TEW0 1356 aa16.69■□□□□ 0.26
LIG3-207ENST00000586119 DDB1Q16531 1140 aa16.69■□□□□ 0.26
LIG3-207ENST00000586119 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
LIG3-207ENST00000586119 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
LIG3-207ENST00000586119 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
LIG3-207ENST00000586119 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms