RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 PLCH1Q4KWH8 1693 aa19.09■□□□□ 0.65
CDK5RAP3-234ENST00000584525 ADGRB1O14514 1584 aa19.09■□□□□ 0.65
CDK5RAP3-234ENST00000584525 HRCP23327 699 aa19.08■□□□□ 0.64
CDK5RAP3-234ENST00000584525 EN1Q05925 392 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-234ENST00000584525 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-234ENST00000584525 BRWD3Q6RI45 1802 aa19.08■□□□□ 0.64
CDK5RAP3-234ENST00000584525 ADGRB2O60241 1585 aa19.07■□□□□ 0.64
CDK5RAP3-234ENST00000584525 STAC3Q96MF2 364 aa19.07■□□□□ 0.64
CDK5RAP3-234ENST00000584525 TULP4Q9NRJ4 1543 aa19.06■□□□□ 0.64
CDK5RAP3-234ENST00000584525 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
CDK5RAP3-234ENST00000584525 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
CDK5RAP3-234ENST00000584525 ABCA3Q99758 1704 aa19.05■□□□□ 0.64
CDK5RAP3-234ENST00000584525 NUTM2GQ5VZR2 741 aa19.04■□□□□ 0.64
CDK5RAP3-234ENST00000584525 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
CDK5RAP3-234ENST00000584525 KIAA0232Q92628 1395 aa19.04■□□□□ 0.64
CDK5RAP3-234ENST00000584525 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-234ENST00000584525 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.64
CDK5RAP3-234ENST00000584525 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.64
CDK5RAP3-234ENST00000584525 CDK19Q9BWU1 502 aa19.02■□□□□ 0.64
CDK5RAP3-234ENST00000584525 TRPM3Q9HCF6 1732 aaPredicted RBP19.02■□□□□ 0.63
CDK5RAP3-234ENST00000584525 SPATA31A1Q5TZJ5 1347 aa19.01■□□□□ 0.63
CDK5RAP3-234ENST00000584525 EVA1CP58658 441 aa19.01■□□□□ 0.63
CDK5RAP3-234ENST00000584525 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
CDK5RAP3-234ENST00000584525 NRAPQ86VF7 1730 aa19■□□□□ 0.63
CDK5RAP3-234ENST00000584525 TRIM37O94972 964 aa19■□□□□ 0.63
CDK5RAP3-234ENST00000584525 EZH2Q15910 746 aaKnown RBP19■□□□□ 0.63
CDK5RAP3-234ENST00000584525 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
CDK5RAP3-234ENST00000584525 ALS2Q96Q42 1657 aa18.99■□□□□ 0.63
CDK5RAP3-234ENST00000584525 NBPF8Q3BBV2 869 aa18.98■□□□□ 0.63
CDK5RAP3-234ENST00000584525 ACEP12821 1306 aa18.98■□□□□ 0.63
CDK5RAP3-234ENST00000584525 APBA3O96018 575 aa18.97■□□□□ 0.63
CDK5RAP3-234ENST00000584525 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
CDK5RAP3-234ENST00000584525 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
CDK5RAP3-234ENST00000584525 ATP7BP35670 1465 aa18.97■□□□□ 0.63
CDK5RAP3-234ENST00000584525 ABTB2Q8N961 1025 aa18.96■□□□□ 0.63
CDK5RAP3-234ENST00000584525 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
CDK5RAP3-234ENST00000584525 LRP5O75197 1615 aa18.96■□□□□ 0.63
CDK5RAP3-234ENST00000584525 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
CDK5RAP3-234ENST00000584525 PLEKHG3A1L390 1219 aa18.94■□□□□ 0.62
CDK5RAP3-234ENST00000584525 POLR3AO14802 1390 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-234ENST00000584525 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-234ENST00000584525 BARGINQ6ZT62 677 aa18.93■□□□□ 0.62
CDK5RAP3-234ENST00000584525 THSD7AQ9UPZ6 1657 aa18.92■□□□□ 0.62
CDK5RAP3-234ENST00000584525 TCP11L2Q8N4U5 519 aa18.92■□□□□ 0.62
CDK5RAP3-234ENST00000584525 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
CDK5RAP3-234ENST00000584525 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-234ENST00000584525 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
CDK5RAP3-234ENST00000584525 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
CDK5RAP3-234ENST00000584525 NLRP13Q86W25 1043 aa18.89■□□□□ 0.61
CDK5RAP3-234ENST00000584525 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
CDK5RAP3-234ENST00000584525 GCP02774 474 aa18.88■□□□□ 0.61
CDK5RAP3-234ENST00000584525 NBPF14Q5TI25 921 aa18.88■□□□□ 0.61
CDK5RAP3-234ENST00000584525 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
CDK5RAP3-234ENST00000584525 CPDO75976 1380 aa18.87■□□□□ 0.61
CDK5RAP3-234ENST00000584525 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
CDK5RAP3-234ENST00000584525 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-234ENST00000584525 CRYBG1Q9Y4K1 1723 aa18.87■□□□□ 0.61
CDK5RAP3-234ENST00000584525 USP19O94966 1318 aa18.86■□□□□ 0.61
CDK5RAP3-234ENST00000584525 ARHGEF28Q8N1W1 1705 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-234ENST00000584525 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
CDK5RAP3-234ENST00000584525 PPIP5K1Q6PFW1 1433 aa18.84■□□□□ 0.61
CDK5RAP3-234ENST00000584525 CENPJQ9HC77 1338 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP3-234ENST00000584525 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
CDK5RAP3-234ENST00000584525 PHRF1Q9P1Y6 1649 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-234ENST00000584525 NLRP6P59044 892 aa18.82■□□□□ 0.6
CDK5RAP3-234ENST00000584525 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
CDK5RAP3-234ENST00000584525 TNS1Q9HBL0 1735 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-234ENST00000584525 NRKQ7Z2Y5 1582 aa18.81■□□□□ 0.6
CDK5RAP3-234ENST00000584525 C11orf95C9JLR9 678 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-234ENST00000584525 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
CDK5RAP3-234ENST00000584525 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
CDK5RAP3-234ENST00000584525 BRD4O60885 1362 aaPredicted RBP18.79■□□□□ 0.6
CDK5RAP3-234ENST00000584525 CRB1P82279 1406 aa18.78■□□□□ 0.6
CDK5RAP3-234ENST00000584525 TOM1L2Q6ZVM7 507 aa18.78■□□□□ 0.6
CDK5RAP3-234ENST00000584525 PPP1R1BQ9UD71 204 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-234ENST00000584525 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
CDK5RAP3-234ENST00000584525 DDB1Q16531 1140 aa18.77■□□□□ 0.6
CDK5RAP3-234ENST00000584525 SPON1Q9HCB6 807 aa18.77■□□□□ 0.6
CDK5RAP3-234ENST00000584525 AATKQ6ZMQ8 1374 aa18.76■□□□□ 0.59
CDK5RAP3-234ENST00000584525 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
CDK5RAP3-234ENST00000584525 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
CDK5RAP3-234ENST00000584525 USP6P35125 1406 aa18.74■□□□□ 0.59
CDK5RAP3-234ENST00000584525 KCNQ2O43526 872 aa18.74■□□□□ 0.59
CDK5RAP3-234ENST00000584525 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
CDK5RAP3-234ENST00000584525 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
CDK5RAP3-234ENST00000584525 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
CDK5RAP3-234ENST00000584525 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
CDK5RAP3-234ENST00000584525 YY1P25490 414 aa18.73■□□□□ 0.59
CDK5RAP3-234ENST00000584525 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
CDK5RAP3-234ENST00000584525 DCAF8L1A6NGE4 600 aa18.72■□□□□ 0.59
CDK5RAP3-234ENST00000584525 PLSCR1O15162 318 aa18.72■□□□□ 0.59
CDK5RAP3-234ENST00000584525 SOX12O15370 315 aa18.72■□□□□ 0.59
CDK5RAP3-234ENST00000584525 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-234ENST00000584525 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
CDK5RAP3-234ENST00000584525 CSB-PGBD3P0DP91 1061 aa18.71■□□□□ 0.59
CDK5RAP3-234ENST00000584525 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
CDK5RAP3-234ENST00000584525 WDR17Q8IZU2 1322 aa18.71■□□□□ 0.59
CDK5RAP3-234ENST00000584525 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
CDK5RAP3-234ENST00000584525 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP3-234ENST00000584525 CDCA7Q9BWT1 371 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms