RNA–Protein interactions for RNA: ENST00000584426.1

SLC46A1-205, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-205ENST00000584426 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
SLC46A1-205ENST00000584426 USP47Q96K76 1375 aa24.37■■□□□ 1.49
SLC46A1-205ENST00000584426 PHRF1Q9P1Y6 1649 aaKnown RBP24.36■■□□□ 1.49
SLC46A1-205ENST00000584426 ST20-MTHFSA0A0A6YYL1 179 aa24.36■■□□□ 1.49
SLC46A1-205ENST00000584426 HAP1P54257 671 aaPredicted RBP24.36■■□□□ 1.49
SLC46A1-205ENST00000584426 PLCH1Q4KWH8 1693 aa24.35■■□□□ 1.49
SLC46A1-205ENST00000584426 ATAD2Q6PL18 1390 aa24.35■■□□□ 1.49
SLC46A1-205ENST00000584426 TESK2Q96S53 571 aa24.33■■□□□ 1.49
SLC46A1-205ENST00000584426 USP6P35125 1406 aa24.33■■□□□ 1.49
SLC46A1-205ENST00000584426 FNBP4Q8N3X1 1017 aaPredicted RBP24.32■■□□□ 1.48
SLC46A1-205ENST00000584426 USP21Q9UK80 565 aa24.32■■□□□ 1.48
SLC46A1-205ENST00000584426 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.32■■□□□ 1.48
SLC46A1-205ENST00000584426 NRKQ7Z2Y5 1582 aa24.31■■□□□ 1.48
SLC46A1-205ENST00000584426 MON2Q7Z3U7 1717 aa24.3■■□□□ 1.48
SLC46A1-205ENST00000584426 NUTM2GQ5VZR2 741 aa24.3■■□□□ 1.48
SLC46A1-205ENST00000584426 BCL9LQ86UU0 1499 aa24.3■■□□□ 1.48
SLC46A1-205ENST00000584426 SLIT2O94813 1529 aa24.3■■□□□ 1.48
SLC46A1-205ENST00000584426 PIK3C2AO00443 1686 aa24.29■■□□□ 1.48
SLC46A1-205ENST00000584426 NWD2Q9ULI1 1742 aa24.28■■□□□ 1.48
SLC46A1-205ENST00000584426 QTRT2Q9H974 415 aaKnown RBP24.28■■□□□ 1.48
SLC46A1-205ENST00000584426 ATRNO75882 1429 aa24.27■■□□□ 1.48
SLC46A1-205ENST00000584426 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
SLC46A1-205ENST00000584426 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
SLC46A1-205ENST00000584426 BRD4O60885 1362 aaPredicted RBP24.27■■□□□ 1.48
SLC46A1-205ENST00000584426 RXRBP28702 533 aa24.26■■□□□ 1.47
SLC46A1-205ENST00000584426 ABTB2Q8N961 1025 aa24.26■■□□□ 1.47
SLC46A1-205ENST00000584426 COL14A1Q05707 1796 aaKnown RBP24.26■■□□□ 1.47
SLC46A1-205ENST00000584426 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
SLC46A1-205ENST00000584426 NRAPQ86VF7 1730 aa24.25■■□□□ 1.47
SLC46A1-205ENST00000584426 TRPC5Q9UL62 973 aaPredicted RBP24.23■■□□□ 1.47
SLC46A1-205ENST00000584426 KTN1Q86UP2 1357 aaKnown RBP24.23■■□□□ 1.47
SLC46A1-205ENST00000584426 CDK12Q9NYV4 1490 aaPredicted RBP24.23■■□□□ 1.47
SLC46A1-205ENST00000584426 RGS12O14924 1447 aa24.22■■□□□ 1.47
SLC46A1-205ENST00000584426 USP19O94966 1318 aa24.22■■□□□ 1.47
SLC46A1-205ENST00000584426 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
SLC46A1-205ENST00000584426 RBM6P78332 1123 aaKnown RBP24.22■■□□□ 1.47
SLC46A1-205ENST00000584426 TMC1Q8TDI8 760 aa24.22■■□□□ 1.47
SLC46A1-205ENST00000584426 PUS7Q96PZ0 661 aaKnown RBP24.21■■□□□ 1.47
SLC46A1-205ENST00000584426 ZNF692Q9BU19 519 aaPredicted RBP24.21■■□□□ 1.47
SLC46A1-205ENST00000584426 TTC21BQ7Z4L5 1316 aa24.2■■□□□ 1.46
SLC46A1-205ENST00000584426 UNC5CLQ8IV45 518 aa24.2■■□□□ 1.46
SLC46A1-205ENST00000584426 SLC12A5Q9H2X9 1139 aa24.2■■□□□ 1.46
SLC46A1-205ENST00000584426 KIAA0232Q92628 1395 aa24.19■■□□□ 1.46
SLC46A1-205ENST00000584426 GLI3P10071 1580 aa24.19■■□□□ 1.46
SLC46A1-205ENST00000584426 SLC24A1O60721 1099 aa24.18■■□□□ 1.46
SLC46A1-205ENST00000584426 TMF1P82094 1093 aa24.18■■□□□ 1.46
SLC46A1-205ENST00000584426 NLRP13Q86W25 1043 aa24.18■■□□□ 1.46
SLC46A1-205ENST00000584426 SLIT3O75094 1523 aa24.18■■□□□ 1.46
SLC46A1-205ENST00000584426 A0A1W2PP64 1363 aa24.17■■□□□ 1.46
SLC46A1-205ENST00000584426 PRDM11Q9NQV5 511 aa24.17■■□□□ 1.46
SLC46A1-205ENST00000584426 MYOM1P52179 1685 aa24.16■■□□□ 1.46
SLC46A1-205ENST00000584426 NLRP6P59044 892 aa24.16■■□□□ 1.46
SLC46A1-205ENST00000584426 ZC3H6P61129 1189 aaKnown RBP24.16■■□□□ 1.46
SLC46A1-205ENST00000584426 NINLQ9Y2I6 1382 aa24.16■■□□□ 1.46
SLC46A1-205ENST00000584426 TTC21AQ8NDW8 1320 aa24.15■■□□□ 1.46
SLC46A1-205ENST00000584426 HDGFL2Q7Z4V5 671 aaPredicted RBP24.15■■□□□ 1.46
SLC46A1-205ENST00000584426 BTG4Q9NY30 223 aa24.15■■□□□ 1.46
SLC46A1-205ENST00000584426 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
SLC46A1-205ENST00000584426 USP54Q70EL1 1684 aa24.14■■□□□ 1.45
SLC46A1-205ENST00000584426 LMO7Q8WWI1 1683 aa24.14■■□□□ 1.45
SLC46A1-205ENST00000584426 EDC4Q6P2E9 1401 aaKnown RBP24.13■■□□□ 1.45
SLC46A1-205ENST00000584426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.13■■□□□ 1.45
SLC46A1-205ENST00000584426 GJD4Q96KN9 370 aaPredicted RBP24.13■■□□□ 1.45
SLC46A1-205ENST00000584426 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
SLC46A1-205ENST00000584426 GCP02774 474 aa24.12■■□□□ 1.45
SLC46A1-205ENST00000584426 VPS72Q15906 364 aa24.11■■□□□ 1.45
SLC46A1-205ENST00000584426 CPDO75976 1380 aa24.11■■□□□ 1.45
SLC46A1-205ENST00000584426 HSPA5P11021 654 aaKnown RBP24.1■■□□□ 1.45
SLC46A1-205ENST00000584426 EIF4G2P78344 907 aaKnown RBP eCLIP24.1■■□□□ 1.45
SLC46A1-205ENST00000584426 ZRANB1Q9UGI0 708 aa24.09■■□□□ 1.45
SLC46A1-205ENST00000584426 CCDC9Q9Y3X0 531 aaKnown RBP24.09■■□□□ 1.45
SLC46A1-205ENST00000584426 ANKRD36BQ8N2N9 1353 aa24.08■■□□□ 1.45
SLC46A1-205ENST00000584426 NME9Q86XW9 330 aa24.08■■□□□ 1.45
SLC46A1-205ENST00000584426 NFAT5O94916 1531 aa24.08■■□□□ 1.45
SLC46A1-205ENST00000584426 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.44
SLC46A1-205ENST00000584426 CDCA8Q53HL2 280 aa24.07■■□□□ 1.44
SLC46A1-205ENST00000584426 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.44
SLC46A1-205ENST00000584426 USP31Q70CQ4 1352 aa24.05■■□□□ 1.44
SLC46A1-205ENST00000584426 ZBTB7CA1YPR0 619 aa24.05■■□□□ 1.44
SLC46A1-205ENST00000584426 SOX12O15370 315 aa24.05■■□□□ 1.44
SLC46A1-205ENST00000584426 COL18A1P39060 1754 aa24.05■■□□□ 1.44
SLC46A1-205ENST00000584426 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
SLC46A1-205ENST00000584426 STRN4Q9NRL3 753 aa24.03■■□□□ 1.44
SLC46A1-205ENST00000584426 OVOS2A0A0J9YW53 1432 aa24.02■■□□□ 1.44
SLC46A1-205ENST00000584426 OVOS2Q6IE36 1432 aa24.02■■□□□ 1.44
SLC46A1-205ENST00000584426 COL5A2P05997 1499 aaPredicted RBP24.01■■□□□ 1.43
SLC46A1-205ENST00000584426 LTN1O94822 1766 aa24.01■■□□□ 1.43
SLC46A1-205ENST00000584426 RGPD5Q99666 1765 aa24.01■■□□□ 1.43
SLC46A1-205ENST00000584426 SPATA31A5Q5VU36 1347 aa24.01■■□□□ 1.43
SLC46A1-205ENST00000584426 SPATA31A7Q8IWB4 1347 aa24.01■■□□□ 1.43
SLC46A1-205ENST00000584426 KIF20BQ96Q89 1820 aa24■■□□□ 1.43
SLC46A1-205ENST00000584426 KCNH5Q8NCM2 988 aa24■■□□□ 1.43
SLC46A1-205ENST00000584426 AATKQ6ZMQ8 1374 aa24■■□□□ 1.43
SLC46A1-205ENST00000584426 FAM98CQ17RN3 349 aaKnown RBP23.98■■□□□ 1.43
SLC46A1-205ENST00000584426 ARHGEF25Q86VW2 580 aa23.98■■□□□ 1.43
SLC46A1-205ENST00000584426 POLR3GLQ9BT43 218 aa23.98■■□□□ 1.43
SLC46A1-205ENST00000584426 THSD7AQ9UPZ6 1657 aa23.98■■□□□ 1.43
SLC46A1-205ENST00000584426 EVA1CP58658 441 aa23.97■■□□□ 1.43
SLC46A1-205ENST00000584426 SEPT12Q8IYM1 358 aa23.97■■□□□ 1.43
SLC46A1-205ENST00000584426 SPATA31A1Q5TZJ5 1347 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms