RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 SOX12O15370 315 aa4.59□□□□□ -1.68
CCDC178-213ENST00000583930 TRPM3Q9HCF6 1732 aaPredicted RBP4.58□□□□□ -1.68
CCDC178-213ENST00000583930 SCAF11Q99590 1463 aaKnown RBP4.58□□□□□ -1.68
CCDC178-213ENST00000583930 NUP155O75694 1391 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 TNRQ92752 1358 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 TSPY4P0CV99 314 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 TSPY10P0CW01 314 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 ABCA3Q99758 1704 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 TTLL13PA6NNM8 815 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 DSG2Q14126 1118 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 SLC52A1Q9NWF4 448 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 AHDC1Q5TGY3 1603 aaPredicted RBP4.58□□□□□ -1.68
CCDC178-213ENST00000583930 SHPRHQ149N8 1683 aa4.58□□□□□ -1.68
CCDC178-213ENST00000583930 ZMYND10O75800 440 aa4.57□□□□□ -1.68
CCDC178-213ENST00000583930 TRIM26Q12899 539 aaPredicted RBP4.57□□□□□ -1.68
CCDC178-213ENST00000583930 POTEGQ6S5H5 508 aa4.57□□□□□ -1.68
CCDC178-213ENST00000583930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC178-213ENST00000583930 TRIM35Q9UPQ4 493 aa4.57□□□□□ -1.68
CCDC178-213ENST00000583930 CAMTA1Q9Y6Y1 1673 aa4.57□□□□□ -1.68
CCDC178-213ENST00000583930 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.57□□□□□ -1.68
CCDC178-213ENST00000583930 HNRNPMP52272 730 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC178-213ENST00000583930 PDE4AP27815 886 aa4.57□□□□□ -1.68
CCDC178-213ENST00000583930 MKRN3Q13064 507 aaKnown RBP4.57□□□□□ -1.68
CCDC178-213ENST00000583930 AFAP1Q8N556 730 aa4.57□□□□□ -1.68
CCDC178-213ENST00000583930 ADAMTS13Q76LX8 1427 aa4.56□□□□□ -1.68
CCDC178-213ENST00000583930 POTEIP0CG38 1075 aa4.56□□□□□ -1.68
CCDC178-213ENST00000583930 UPF1Q92900 1129 aaKnown RBP eCLIP4.56□□□□□ -1.68
CCDC178-213ENST00000583930 BMP2KQ9NSY1 1161 aaPredicted RBP4.56□□□□□ -1.68
CCDC178-213ENST00000583930 ALS2Q96Q42 1657 aa4.56□□□□□ -1.68
CCDC178-213ENST00000583930 PPP1R15BQ5SWA1 713 aa4.56□□□□□ -1.68
CCDC178-213ENST00000583930 WNK3Q9BYP7 1800 aa4.56□□□□□ -1.68
CCDC178-213ENST00000583930 TMEM2Q9UHN6 1383 aa4.56□□□□□ -1.68
CCDC178-213ENST00000583930 GRXCR2A6NFK2 248 aa4.55□□□□□ -1.68
CCDC178-213ENST00000583930 FAM208AQ9UK61 1670 aaKnown RBP4.55□□□□□ -1.68
CCDC178-213ENST00000583930 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.55□□□□□ -1.68
CCDC178-213ENST00000583930 FECHP22830 423 aa4.55□□□□□ -1.68
CCDC178-213ENST00000583930 PUS7Q96PZ0 661 aaKnown RBP4.55□□□□□ -1.68
CCDC178-213ENST00000583930 BRD4O60885 1362 aaPredicted RBP4.55□□□□□ -1.68
CCDC178-213ENST00000583930 PLCH1Q4KWH8 1693 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 KDM4FA0A1W2PPD8 638 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 RAPGEF3O95398 923 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 MFSD10Q14728 455 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 KRI1Q8N9T8 703 aaKnown RBP4.54□□□□□ -1.68
CCDC178-213ENST00000583930 PLEKHG2Q9H7P9 1386 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 GPIHBP1Q8IV16 184 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 KIF20BQ96Q89 1820 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 KCNH8Q96L42 1107 aa4.54□□□□□ -1.68
CCDC178-213ENST00000583930 ANKARQ7Z5J8 1434 aa4.53□□□□□ -1.68
CCDC178-213ENST00000583930 DDX12PQ92771 950 aa4.53□□□□□ -1.68
CCDC178-213ENST00000583930 CCDC144AA2RUR9 1427 aa4.53□□□□□ -1.68
CCDC178-213ENST00000583930 C2orf72A6NCS6 295 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 CAMK2BQ13554 666 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 RIMS2Q9UQ26 1411 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 CICQ96RK0 1608 aaPredicted RBP4.52□□□□□ -1.69
CCDC178-213ENST00000583930 LMO7Q8WWI1 1683 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 ATN1P54259 1190 aaPredicted RBP4.52□□□□□ -1.69
CCDC178-213ENST00000583930 TMEM92Q6UXU6 159 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 BARGINQ6ZT62 677 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 MICALL2Q8IY33 904 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 PDCD7Q8N8D1 485 aaKnown RBP4.52□□□□□ -1.69
CCDC178-213ENST00000583930 FAM117AQ9C073 453 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 GPHNQ9NQX3 736 aaPredicted RBP4.52□□□□□ -1.69
CCDC178-213ENST00000583930 NPHP4O75161 1426 aaPredicted RBP4.52□□□□□ -1.69
CCDC178-213ENST00000583930 KDM4CQ9H3R0 1056 aa4.52□□□□□ -1.69
CCDC178-213ENST00000583930 NWD2Q9ULI1 1742 aa4.51□□□□□ -1.69
CCDC178-213ENST00000583930 ABCC11Q96J66 1382 aa4.51□□□□□ -1.69
CCDC178-213ENST00000583930 TULP4Q9NRJ4 1543 aa4.51□□□□□ -1.69
CCDC178-213ENST00000583930 PRIM1P49642 420 aaKnown RBP4.51□□□□□ -1.69
CCDC178-213ENST00000583930 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.51□□□□□ -1.69
CCDC178-213ENST00000583930 NLRP7Q8WX94 980 aa4.51□□□□□ -1.69
CCDC178-213ENST00000583930 LRPPRCP42704 1394 aaKnown RBP4.51□□□□□ -1.69
CCDC178-213ENST00000583930 ARID3AQ99856 593 aa4.5□□□□□ -1.69
CCDC178-213ENST00000583930 NUTM2FA1L443 756 aa4.5□□□□□ -1.69
CCDC178-213ENST00000583930 PLPP6Q8IY26 295 aa4.5□□□□□ -1.69
CCDC178-213ENST00000583930 MPHOSPH9Q99550 1183 aa4.5□□□□□ -1.69
CCDC178-213ENST00000583930 NINLQ9Y2I6 1382 aa4.5□□□□□ -1.69
CCDC178-213ENST00000583930 ARID4BQ4LE39 1312 aaPredicted RBP4.5□□□□□ -1.69
CCDC178-213ENST00000583930 COL16A1Q07092 1604 aaPredicted RBP4.5□□□□□ -1.69
CCDC178-213ENST00000583930 TRIM66O15016 1216 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 DCBLD2Q96PD2 775 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 RGPD3A6NKT7 1758 aaPredicted RBP4.49□□□□□ -1.69
CCDC178-213ENST00000583930 RGPD4Q7Z3J3 1758 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 GPR37O15354 613 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 PDE4DQ08499 809 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 NRAPQ86VF7 1730 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 SLIT3O75094 1523 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 PIK3C2AO00443 1686 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 ARID3CA6NKF2 412 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 FAM161AQ3B820 660 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 OTUD5Q96G74 571 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 ADGRL3Q9HAR2 1447 aa4.49□□□□□ -1.69
CCDC178-213ENST00000583930 ATP7BP35670 1465 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 EIF3AQ14152 1382 aaKnown RBP4.48□□□□□ -1.69
CCDC178-213ENST00000583930 ZNF831Q5JPB2 1677 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 ADAMTS7Q9UKP4 1686 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 TBX22Q9Y458 520 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 PTPRUQ92729 1446 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 RGPD1P0DJD0 1748 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 COL18A1P39060 1754 aa4.48□□□□□ -1.69
CCDC178-213ENST00000583930 PELP1Q8IZL8 1130 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms