RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 PHLPP1O60346 1717 aa8.2□□□□□ -1.1
VAPA-207ENST00000583879 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
VAPA-207ENST00000583879 TMEM131LA2VDJ0 1609 aa8.19□□□□□ -1.1
VAPA-207ENST00000583879 COL16A1Q07092 1604 aaPredicted RBP8.19□□□□□ -1.1
VAPA-207ENST00000583879 ERBB3P21860 1342 aa8.19□□□□□ -1.1
VAPA-207ENST00000583879 AFF2P51816 1311 aa8.19□□□□□ -1.1
VAPA-207ENST00000583879 CHD2O14647 1828 aaKnown RBP8.19□□□□□ -1.1
VAPA-207ENST00000583879 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
VAPA-207ENST00000583879 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
VAPA-207ENST00000583879 QTRT2Q9H974 415 aaKnown RBP8.18□□□□□ -1.1
VAPA-207ENST00000583879 NUP155O75694 1391 aa8.18□□□□□ -1.1
VAPA-207ENST00000583879 AHDC1Q5TGY3 1603 aaPredicted RBP8.18□□□□□ -1.1
VAPA-207ENST00000583879 RBM6P78332 1123 aaKnown RBP8.17□□□□□ -1.1
VAPA-207ENST00000583879 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
VAPA-207ENST00000583879 ROCK1Q13464 1354 aa8.17□□□□□ -1.1
VAPA-207ENST00000583879 SETD5Q9C0A6 1442 aa8.17□□□□□ -1.1
VAPA-207ENST00000583879 DCCP43146 1447 aa8.16□□□□□ -1.1
VAPA-207ENST00000583879 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
VAPA-207ENST00000583879 DDX17Q92841 729 aaKnown RBP8.16□□□□□ -1.1
VAPA-207ENST00000583879 C8orf37Q96NL8 207 aa8.16□□□□□ -1.1
VAPA-207ENST00000583879 CDK12Q9NYV4 1490 aaPredicted RBP8.16□□□□□ -1.1
VAPA-207ENST00000583879 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.15□□□□□ -1.1
VAPA-207ENST00000583879 DIP2AQ14689 1571 aa8.15□□□□□ -1.1
VAPA-207ENST00000583879 MST1RQ04912 1400 aa8.15□□□□□ -1.1
VAPA-207ENST00000583879 METP08581 1390 aa8.15□□□□□ -1.1
VAPA-207ENST00000583879 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
VAPA-207ENST00000583879 SETD1AO15047 1707 aaKnown RBP8.15□□□□□ -1.11
VAPA-207ENST00000583879 TRPM2O94759 1503 aa8.14□□□□□ -1.11
VAPA-207ENST00000583879 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
VAPA-207ENST00000583879 ITGAEP38570 1179 aa8.14□□□□□ -1.11
VAPA-207ENST00000583879 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
VAPA-207ENST00000583879 ASXL1Q8IXJ9 1541 aa8.13□□□□□ -1.11
VAPA-207ENST00000583879 SHPRHQ149N8 1683 aa8.13□□□□□ -1.11
VAPA-207ENST00000583879 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
VAPA-207ENST00000583879 VGFO15240 615 aaPredicted RBP8.12□□□□□ -1.11
VAPA-207ENST00000583879 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
VAPA-207ENST00000583879 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
VAPA-207ENST00000583879 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
VAPA-207ENST00000583879 USP21Q9UK80 565 aa8.12□□□□□ -1.11
VAPA-207ENST00000583879 UNC13BO14795 1591 aa8.12□□□□□ -1.11
VAPA-207ENST00000583879 E9PCH4 1651 aa8.11□□□□□ -1.11
VAPA-207ENST00000583879 SOS2Q07890 1332 aaPredicted RBP8.11□□□□□ -1.11
VAPA-207ENST00000583879 MYO5BQ9ULV0 1848 aa8.11□□□□□ -1.11
VAPA-207ENST00000583879 ZSWIM6Q9HCJ5 1215 aa8.11□□□□□ -1.11
VAPA-207ENST00000583879 TRPC5Q9UL62 973 aaPredicted RBP8.11□□□□□ -1.11
VAPA-207ENST00000583879 RGS12O14924 1447 aa8.11□□□□□ -1.11
VAPA-207ENST00000583879 ADGRL3Q9HAR2 1447 aa8.11□□□□□ -1.11
VAPA-207ENST00000583879 SETBP1Q9Y6X0 1596 aa8.1□□□□□ -1.11
VAPA-207ENST00000583879 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
VAPA-207ENST00000583879 RNF166Q96A37 237 aaPredicted RBP8.1□□□□□ -1.11
VAPA-207ENST00000583879 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
VAPA-207ENST00000583879 IQGAP3Q86VI3 1631 aa8.1□□□□□ -1.11
VAPA-207ENST00000583879 SOX12O15370 315 aa8.09□□□□□ -1.11
VAPA-207ENST00000583879 ATAD2Q6PL18 1390 aa8.09□□□□□ -1.12
VAPA-207ENST00000583879 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
VAPA-207ENST00000583879 CCDC125Q86Z20 511 aa8.08□□□□□ -1.12
VAPA-207ENST00000583879 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
VAPA-207ENST00000583879 NRXN3Q9Y4C0 1643 aa8.07□□□□□ -1.12
VAPA-207ENST00000583879 RPGRIP1LQ68CZ1 1315 aa8.07□□□□□ -1.12
VAPA-207ENST00000583879 XRN1Q8IZH2 1706 aaKnown RBP8.07□□□□□ -1.12
VAPA-207ENST00000583879 ESCO1Q5FWF5 840 aa8.07□□□□□ -1.12
VAPA-207ENST00000583879 TMEM92Q6UXU6 159 aa8.07□□□□□ -1.12
VAPA-207ENST00000583879 NHSL1Q5SYE7 1610 aa8.07□□□□□ -1.12
VAPA-207ENST00000583879 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
VAPA-207ENST00000583879 RIOK3O14730 519 aaKnown RBP8.06□□□□□ -1.12
VAPA-207ENST00000583879 FOXO3O43524 673 aa8.06□□□□□ -1.12
VAPA-207ENST00000583879 ZNF687Q8N1G0 1237 aa8.06□□□□□ -1.12
VAPA-207ENST00000583879 GJD4Q96KN9 370 aaPredicted RBP8.06□□□□□ -1.12
VAPA-207ENST00000583879 NPHP3Q7Z494 1330 aa8.05□□□□□ -1.12
VAPA-207ENST00000583879 ATRNO75882 1429 aa8.05□□□□□ -1.12
VAPA-207ENST00000583879 NEXMIFQ5QGS0 1516 aa8.04□□□□□ -1.12
VAPA-207ENST00000583879 GPR153Q6NV75 609 aa8.04□□□□□ -1.12
VAPA-207ENST00000583879 BCL9LQ86UU0 1499 aa8.04□□□□□ -1.12
VAPA-207ENST00000583879 HFM1A2PYH4 1435 aa8.03□□□□□ -1.12
VAPA-207ENST00000583879 SRCAPQ6ZRS2 3230 aa8.03□□□□□ -1.12
VAPA-207ENST00000583879 LRPPRCP42704 1394 aaKnown RBP8.03□□□□□ -1.12
VAPA-207ENST00000583879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.03□□□□□ -1.12
VAPA-207ENST00000583879 XPCQ01831 940 aaPredicted RBP8.03□□□□□ -1.12
VAPA-207ENST00000583879 WAPLQ7Z5K2 1190 aa8.03□□□□□ -1.12
VAPA-207ENST00000583879 UNC5CLQ8IV45 518 aa8.03□□□□□ -1.12
VAPA-207ENST00000583879 ZFP91Q96JP5 570 aaPredicted RBP8.03□□□□□ -1.12
VAPA-207ENST00000583879 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
VAPA-207ENST00000583879 PRAG1Q86YV5 1406 aa8.03□□□□□ -1.12
VAPA-207ENST00000583879 NUTM2FA1L443 756 aa8.02□□□□□ -1.13
VAPA-207ENST00000583879 STK26Q9P289 416 aa8.02□□□□□ -1.13
VAPA-207ENST00000583879 PHF8Q9UPP1 1060 aa8.02□□□□□ -1.13
VAPA-207ENST00000583879 NAIPQ13075 1403 aa8.02□□□□□ -1.13
VAPA-207ENST00000583879 ADGRF5Q8IZF2 1346 aa8.02□□□□□ -1.13
VAPA-207ENST00000583879 MYOM2P54296 1465 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 SPHKAPQ2M3C7 1700 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 NALCNQ8IZF0 1738 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 LAMC1P11047 1609 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 PTGER2P43116 358 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 SPATA31A3Q5VYP0 1347 aa8.01□□□□□ -1.13
VAPA-207ENST00000583879 CLTCL1P53675 1640 aa8□□□□□ -1.13
VAPA-207ENST00000583879 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
VAPA-207ENST00000583879 RGL3Q3MIN7 710 aa8□□□□□ -1.13
VAPA-207ENST00000583879 ARSIQ5FYB1 569 aa8□□□□□ -1.13
VAPA-207ENST00000583879 TMEM132EQ6IEE7 984 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms