RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 EIF3AQ14152 1382 aaKnown RBP23.86■■□□□ 1.41
SREBF1-221ENST00000583080 THSD7AQ9UPZ6 1657 aa23.83■■□□□ 1.41
SREBF1-221ENST00000583080 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
SREBF1-221ENST00000583080 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.41
SREBF1-221ENST00000583080 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
SREBF1-221ENST00000583080 ATP7BP35670 1465 aa23.81■■□□□ 1.4
SREBF1-221ENST00000583080 PSDA5PKW4 1024 aaPredicted RBP23.81■■□□□ 1.4
SREBF1-221ENST00000583080 FAM182BQ5T319 152 aa23.81■■□□□ 1.4
SREBF1-221ENST00000583080 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
SREBF1-221ENST00000583080 BAG6P46379 1132 aa23.8■■□□□ 1.4
SREBF1-221ENST00000583080 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
SREBF1-221ENST00000583080 SPATA31A5Q5VU36 1347 aa23.8■■□□□ 1.4
SREBF1-221ENST00000583080 SPATA31A7Q8IWB4 1347 aa23.8■■□□□ 1.4
SREBF1-221ENST00000583080 ITSN1Q15811 1721 aa23.79■■□□□ 1.4
SREBF1-221ENST00000583080 NGDNQ8NEJ9 315 aaKnown RBP23.79■■□□□ 1.4
SREBF1-221ENST00000583080 TNS1Q9HBL0 1735 aaKnown RBP23.79■■□□□ 1.4
SREBF1-221ENST00000583080 PHRF1Q9P1Y6 1649 aaKnown RBP23.78■■□□□ 1.4
SREBF1-221ENST00000583080 PAK3O75914 559 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-221ENST00000583080 PRDM11Q9NQV5 511 aa23.77■■□□□ 1.4
SREBF1-221ENST00000583080 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-221ENST00000583080 KIAA0232Q92628 1395 aa23.75■■□□□ 1.39
SREBF1-221ENST00000583080 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
SREBF1-221ENST00000583080 HRCP23327 699 aa23.73■■□□□ 1.39
SREBF1-221ENST00000583080 CHRNA2Q15822 529 aa23.72■■□□□ 1.39
SREBF1-221ENST00000583080 NUDT16Q96DE0 195 aaKnown RBP23.72■■□□□ 1.39
SREBF1-221ENST00000583080 DISP2A7MBM2 1401 aa23.72■■□□□ 1.39
SREBF1-221ENST00000583080 SPATA31A1Q5TZJ5 1347 aa23.7■■□□□ 1.38
SREBF1-221ENST00000583080 NUTM2GQ5VZR2 741 aa23.69■■□□□ 1.38
SREBF1-221ENST00000583080 NRKQ7Z2Y5 1582 aa23.69■■□□□ 1.38
SREBF1-221ENST00000583080 STRN4Q9NRL3 753 aa23.68■■□□□ 1.38
SREBF1-221ENST00000583080 STAC3Q96MF2 364 aa23.67■■□□□ 1.38
SREBF1-221ENST00000583080 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
SREBF1-221ENST00000583080 ZC3H6P61129 1189 aaKnown RBP23.66■■□□□ 1.38
SREBF1-221ENST00000583080 R3HDM1Q15032 1099 aaKnown RBP23.66■■□□□ 1.38
SREBF1-221ENST00000583080 CDK19Q9BWU1 502 aa23.66■■□□□ 1.38
SREBF1-221ENST00000583080 EZH2Q15910 746 aaKnown RBP23.65■■□□□ 1.38
SREBF1-221ENST00000583080 SSH2Q76I76 1423 aa23.64■■□□□ 1.37
SREBF1-221ENST00000583080 ACEP12821 1306 aa23.63■■□□□ 1.37
SREBF1-221ENST00000583080 TRIM37O94972 964 aa23.63■■□□□ 1.37
SREBF1-221ENST00000583080 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
SREBF1-221ENST00000583080 USP35Q9P2H5 1018 aa23.62■■□□□ 1.37
SREBF1-221ENST00000583080 LMO7Q8WWI1 1683 aa23.62■■□□□ 1.37
SREBF1-221ENST00000583080 CAMTA1Q9Y6Y1 1673 aa23.62■■□□□ 1.37
SREBF1-221ENST00000583080 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
SREBF1-221ENST00000583080 FAM196AQ6ZSG2 479 aa23.6■■□□□ 1.37
SREBF1-221ENST00000583080 CAMKK2Q96RR4 588 aa23.6■■□□□ 1.37
SREBF1-221ENST00000583080 CCDC61Q9Y6R9 512 aa23.59■■□□□ 1.37
SREBF1-221ENST00000583080 RREB1Q92766 1687 aa23.59■■□□□ 1.37
SREBF1-221ENST00000583080 USP19O94966 1318 aa23.59■■□□□ 1.37
SREBF1-221ENST00000583080 PLEKHG3A1L390 1219 aa23.58■■□□□ 1.37
SREBF1-221ENST00000583080 NUP188Q5SRE5 1749 aa23.57■■□□□ 1.36
SREBF1-221ENST00000583080 LARP1Q6PKG0 1096 aaKnown RBP23.57■■□□□ 1.36
SREBF1-221ENST00000583080 CPDO75976 1380 aa23.56■■□□□ 1.36
SREBF1-221ENST00000583080 NBPF1Q3BBV0 1214 aa23.56■■□□□ 1.36
SREBF1-221ENST00000583080 BARGINQ6ZT62 677 aa23.56■■□□□ 1.36
SREBF1-221ENST00000583080 ABTB2Q8N961 1025 aa23.56■■□□□ 1.36
SREBF1-221ENST00000583080 APBA3O96018 575 aa23.55■■□□□ 1.36
SREBF1-221ENST00000583080 EVA1CP58658 441 aa23.55■■□□□ 1.36
SREBF1-221ENST00000583080 PARD3Q8TEW0 1356 aa23.54■■□□□ 1.36
SREBF1-221ENST00000583080 PPIP5K1Q6PFW1 1433 aa23.54■■□□□ 1.36
SREBF1-221ENST00000583080 COL5A2P05997 1499 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-221ENST00000583080 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
SREBF1-221ENST00000583080 TCP11L2Q8N4U5 519 aa23.52■■□□□ 1.36
SREBF1-221ENST00000583080 PARP4Q9UKK3 1724 aaKnown RBP23.51■■□□□ 1.35
SREBF1-221ENST00000583080 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
SREBF1-221ENST00000583080 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
SREBF1-221ENST00000583080 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
SREBF1-221ENST00000583080 GCP02774 474 aa23.48■■□□□ 1.35
SREBF1-221ENST00000583080 CENPJQ9HC77 1338 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-221ENST00000583080 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
SREBF1-221ENST00000583080 LRRC37A3O60309 1634 aa23.46■■□□□ 1.35
SREBF1-221ENST00000583080 SLIT3O75094 1523 aa23.46■■□□□ 1.35
SREBF1-221ENST00000583080 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
SREBF1-221ENST00000583080 USP6P35125 1406 aa23.45■■□□□ 1.34
SREBF1-221ENST00000583080 CRB1P82279 1406 aa23.44■■□□□ 1.34
SREBF1-221ENST00000583080 ZBTB7CA1YPR0 619 aa23.44■■□□□ 1.34
SREBF1-221ENST00000583080 THRAP3Q9Y2W1 955 aaKnown RBP23.44■■□□□ 1.34
SREBF1-221ENST00000583080 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
SREBF1-221ENST00000583080 BRD4O60885 1362 aaPredicted RBP23.41■■□□□ 1.34
SREBF1-221ENST00000583080 WNK3Q9BYP7 1800 aa23.41■■□□□ 1.34
SREBF1-221ENST00000583080 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
SREBF1-221ENST00000583080 COL18A1P39060 1754 aa23.41■■□□□ 1.34
SREBF1-221ENST00000583080 OVOS2A0A0G2JMS6 1433 aa23.41■■□□□ 1.34
SREBF1-221ENST00000583080 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
SREBF1-221ENST00000583080 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
SREBF1-221ENST00000583080 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
SREBF1-221ENST00000583080 SBF2Q86WG5 1849 aa23.39■■□□□ 1.33
SREBF1-221ENST00000583080 NLRP6P59044 892 aa23.39■■□□□ 1.33
SREBF1-221ENST00000583080 NBPF14Q5TI25 921 aa23.39■■□□□ 1.33
SREBF1-221ENST00000583080 RGPD3A6NKT7 1758 aaPredicted RBP23.38■■□□□ 1.33
SREBF1-221ENST00000583080 RGPD4Q7Z3J3 1758 aa23.38■■□□□ 1.33
SREBF1-221ENST00000583080 CPSF1Q10570 1443 aaKnown RBP23.35■■□□□ 1.33
SREBF1-221ENST00000583080 PTF1AQ7RTS3 328 aa23.35■■□□□ 1.33
SREBF1-221ENST00000583080 TRPM1Q7Z4N2 1603 aa23.34■■□□□ 1.33
SREBF1-221ENST00000583080 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
SREBF1-221ENST00000583080 AXIN2Q9Y2T1 843 aa23.34■■□□□ 1.33
SREBF1-221ENST00000583080 DDB1Q16531 1140 aa23.33■■□□□ 1.33
SREBF1-221ENST00000583080 AKAP12Q02952 1782 aa23.32■■□□□ 1.32
SREBF1-221ENST00000583080 ANO8Q9HCE9 1232 aaPredicted RBP23.32■■□□□ 1.32
SREBF1-221ENST00000583080 CASZ1Q86V15 1759 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms