RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 CDK12Q9NYV4 1490 aaPredicted RBP26.7■■□□□ 1.87
LIMS2-218ENST00000582671 PAK3O75914 559 aaPredicted RBP26.7■■□□□ 1.86
LIMS2-218ENST00000582671 SLIT2O94813 1529 aa26.7■■□□□ 1.86
LIMS2-218ENST00000582671 ATRNO75882 1429 aa26.69■■□□□ 1.86
LIMS2-218ENST00000582671 HAP1P54257 671 aaPredicted RBP26.69■■□□□ 1.86
LIMS2-218ENST00000582671 RBM6P78332 1123 aaKnown RBP26.69■■□□□ 1.86
LIMS2-218ENST00000582671 NWD2Q9ULI1 1742 aa26.69■■□□□ 1.86
LIMS2-218ENST00000582671 PHRF1Q9P1Y6 1649 aaKnown RBP26.68■■□□□ 1.86
LIMS2-218ENST00000582671 EVC2Q86UK5 1308 aa26.67■■□□□ 1.86
LIMS2-218ENST00000582671 TRPC5Q9UL62 973 aaPredicted RBP26.67■■□□□ 1.86
LIMS2-218ENST00000582671 RGS12O14924 1447 aa26.66■■□□□ 1.86
LIMS2-218ENST00000582671 AKAP12Q02952 1782 aa26.65■■□□□ 1.86
LIMS2-218ENST00000582671 CABP1Q9NZU7 370 aa26.64■■□□□ 1.86
LIMS2-218ENST00000582671 NRAPQ86VF7 1730 aa26.62■■□□□ 1.85
LIMS2-218ENST00000582671 SBNO2Q9Y2G9 1366 aa26.62■■□□□ 1.85
LIMS2-218ENST00000582671 COL14A1Q05707 1796 aaKnown RBP26.62■■□□□ 1.85
LIMS2-218ENST00000582671 FAM83GA6ND36 823 aa26.61■■□□□ 1.85
LIMS2-218ENST00000582671 UNC5CLQ8IV45 518 aa26.61■■□□□ 1.85
LIMS2-218ENST00000582671 GLI3P10071 1580 aa26.6■■□□□ 1.85
LIMS2-218ENST00000582671 NUTM2GQ5VZR2 741 aa26.6■■□□□ 1.85
LIMS2-218ENST00000582671 CLSPNQ9HAW4 1339 aa26.58■■□□□ 1.85
LIMS2-218ENST00000582671 USP6P35125 1406 aa26.57■■□□□ 1.84
LIMS2-218ENST00000582671 GJD4Q96KN9 370 aaPredicted RBP26.57■■□□□ 1.84
LIMS2-218ENST00000582671 NRKQ7Z2Y5 1582 aa26.56■■□□□ 1.84
LIMS2-218ENST00000582671 ABTB2Q8N961 1025 aa26.55■■□□□ 1.84
LIMS2-218ENST00000582671 MON2Q7Z3U7 1717 aa26.55■■□□□ 1.84
LIMS2-218ENST00000582671 SSH2Q76I76 1423 aa26.55■■□□□ 1.84
LIMS2-218ENST00000582671 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
LIMS2-218ENST00000582671 BRWD3Q6RI45 1802 aa26.53■■□□□ 1.84
LIMS2-218ENST00000582671 BRD4O60885 1362 aaPredicted RBP26.53■■□□□ 1.84
LIMS2-218ENST00000582671 ATAD2Q6PL18 1390 aa26.53■■□□□ 1.84
LIMS2-218ENST00000582671 ST20-MTHFSA0A0A6YYL1 179 aa26.51■■□□□ 1.83
LIMS2-218ENST00000582671 BTG4Q9NY30 223 aa26.51■■□□□ 1.83
LIMS2-218ENST00000582671 TIMELESSQ9UNS1 1208 aa26.51■■□□□ 1.83
LIMS2-218ENST00000582671 CPSF1Q10570 1443 aaKnown RBP26.5■■□□□ 1.83
LIMS2-218ENST00000582671 KIAA0232Q92628 1395 aa26.5■■□□□ 1.83
LIMS2-218ENST00000582671 VPS72Q15906 364 aa26.5■■□□□ 1.83
LIMS2-218ENST00000582671 TESK2Q96S53 571 aa26.5■■□□□ 1.83
LIMS2-218ENST00000582671 USP19O94966 1318 aa26.49■■□□□ 1.83
LIMS2-218ENST00000582671 UPF1Q92900 1129 aaKnown RBP eCLIP26.49■■□□□ 1.83
LIMS2-218ENST00000582671 ZC3H6P61129 1189 aaKnown RBP26.48■■□□□ 1.83
LIMS2-218ENST00000582671 PRDM11Q9NQV5 511 aa26.48■■□□□ 1.83
LIMS2-218ENST00000582671 NLRP13Q86W25 1043 aa26.47■■□□□ 1.83
LIMS2-218ENST00000582671 CCER1Q8TC90 406 aaPredicted RBP26.47■■□□□ 1.83
LIMS2-218ENST00000582671 CD163L1Q9NR16 1453 aa26.47■■□□□ 1.83
LIMS2-218ENST00000582671 CHRNA2Q15822 529 aa26.46■■□□□ 1.83
LIMS2-218ENST00000582671 ZNF692Q9BU19 519 aaPredicted RBP26.46■■□□□ 1.83
LIMS2-218ENST00000582671 SLIT3O75094 1523 aa26.45■■□□□ 1.83
LIMS2-218ENST00000582671 USP47Q96K76 1375 aa26.45■■□□□ 1.82
LIMS2-218ENST00000582671 LMO7Q8WWI1 1683 aa26.44■■□□□ 1.82
LIMS2-218ENST00000582671 CCDC9Q9Y3X0 531 aaKnown RBP26.44■■□□□ 1.82
LIMS2-218ENST00000582671 TTC21BQ7Z4L5 1316 aa26.43■■□□□ 1.82
LIMS2-218ENST00000582671 NLRP6P59044 892 aa26.43■■□□□ 1.82
LIMS2-218ENST00000582671 KTN1Q86UP2 1357 aaKnown RBP26.43■■□□□ 1.82
LIMS2-218ENST00000582671 GCP02774 474 aa26.42■■□□□ 1.82
LIMS2-218ENST00000582671 SLC12A5Q9H2X9 1139 aa26.42■■□□□ 1.82
LIMS2-218ENST00000582671 CAMTA1Q9Y6Y1 1673 aa26.41■■□□□ 1.82
LIMS2-218ENST00000582671 TMC1Q8TDI8 760 aa26.41■■□□□ 1.82
LIMS2-218ENST00000582671 PUS7Q96PZ0 661 aaKnown RBP26.41■■□□□ 1.82
LIMS2-218ENST00000582671 CPDO75976 1380 aa26.41■■□□□ 1.82
LIMS2-218ENST00000582671 COL18A1P39060 1754 aa26.39■■□□□ 1.82
LIMS2-218ENST00000582671 ONECUT3O60422 494 aaPredicted RBP26.39■■□□□ 1.82
LIMS2-218ENST00000582671 USP54Q70EL1 1684 aa26.38■■□□□ 1.81
LIMS2-218ENST00000582671 RGPD5Q99666 1765 aa26.38■■□□□ 1.81
LIMS2-218ENST00000582671 TTC21AQ8NDW8 1320 aa26.38■■□□□ 1.81
LIMS2-218ENST00000582671 SEPT12Q8IYM1 358 aa26.37■■□□□ 1.81
LIMS2-218ENST00000582671 SPATA31A5Q5VU36 1347 aa26.37■■□□□ 1.81
LIMS2-218ENST00000582671 SPATA31A7Q8IWB4 1347 aa26.37■■□□□ 1.81
LIMS2-218ENST00000582671 STRN4Q9NRL3 753 aa26.35■■□□□ 1.81
LIMS2-218ENST00000582671 A0A1W2PP64 1363 aa26.34■■□□□ 1.81
LIMS2-218ENST00000582671 THSD7AQ9UPZ6 1657 aa26.34■■□□□ 1.81
LIMS2-218ENST00000582671 FAM98CQ17RN3 349 aaKnown RBP26.33■■□□□ 1.81
LIMS2-218ENST00000582671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.33■■□□□ 1.81
LIMS2-218ENST00000582671 ZRANB1Q9UGI0 708 aa26.33■■□□□ 1.81
LIMS2-218ENST00000582671 SLC24A1O60721 1099 aa26.32■■□□□ 1.8
LIMS2-218ENST00000582671 HDGFL2Q7Z4V5 671 aaPredicted RBP26.32■■□□□ 1.8
LIMS2-218ENST00000582671 SPATA31A1Q5TZJ5 1347 aa26.31■■□□□ 1.8
LIMS2-218ENST00000582671 NFAT5O94916 1531 aa26.3■■□□□ 1.8
LIMS2-218ENST00000582671 ZBTB7CA1YPR0 619 aa26.3■■□□□ 1.8
LIMS2-218ENST00000582671 TMF1P82094 1093 aa26.3■■□□□ 1.8
LIMS2-218ENST00000582671 NME9Q86XW9 330 aa26.3■■□□□ 1.8
LIMS2-218ENST00000582671 TERF2IPQ9NYB0 399 aa26.3■■□□□ 1.8
LIMS2-218ENST00000582671 EDC4Q6P2E9 1401 aaKnown RBP26.3■■□□□ 1.8
LIMS2-218ENST00000582671 COL5A2P05997 1499 aaPredicted RBP26.3■■□□□ 1.8
LIMS2-218ENST00000582671 LTN1O94822 1766 aa26.29■■□□□ 1.8
LIMS2-218ENST00000582671 EVA1CP58658 441 aa26.29■■□□□ 1.8
LIMS2-218ENST00000582671 USP31Q70CQ4 1352 aa26.29■■□□□ 1.8
LIMS2-218ENST00000582671 NINLQ9Y2I6 1382 aa26.29■■□□□ 1.8
LIMS2-218ENST00000582671 SOX12O15370 315 aa26.28■■□□□ 1.8
LIMS2-218ENST00000582671 LARP1Q6PKG0 1096 aaKnown RBP26.28■■□□□ 1.8
LIMS2-218ENST00000582671 AATKQ6ZMQ8 1374 aa26.28■■□□□ 1.8
LIMS2-218ENST00000582671 MYOM1P52179 1685 aa26.28■■□□□ 1.8
LIMS2-218ENST00000582671 A0A0G2JS52 829 aa26.26■■□□□ 1.79
LIMS2-218ENST00000582671 MYT1Q01538 1121 aa26.26■■□□□ 1.79
LIMS2-218ENST00000582671 KCNH5Q8NCM2 988 aa26.26■■□□□ 1.79
LIMS2-218ENST00000582671 KRT27Q7Z3Y8 459 aa26.25■■□□□ 1.79
LIMS2-218ENST00000582671 ARHGEF25Q86VW2 580 aa26.25■■□□□ 1.79
LIMS2-218ENST00000582671 USP35Q9P2H5 1018 aa26.24■■□□□ 1.79
LIMS2-218ENST00000582671 AXIN2Q9Y2T1 843 aa26.24■■□□□ 1.79
LIMS2-218ENST00000582671 OVOS2A0A0J9YW53 1432 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms