RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 USP21Q9UK80 565 aa25.47■■□□□ 1.67
ERBB2-211ENST00000582648 TIMELESSQ9UNS1 1208 aa25.47■■□□□ 1.67
ERBB2-211ENST00000582648 PLCH1Q4KWH8 1693 aa25.47■■□□□ 1.67
ERBB2-211ENST00000582648 PHRF1Q9P1Y6 1649 aaKnown RBP25.46■■□□□ 1.67
ERBB2-211ENST00000582648 USP47Q96K76 1375 aa25.45■■□□□ 1.67
ERBB2-211ENST00000582648 NUTM2GQ5VZR2 741 aa25.45■■□□□ 1.66
ERBB2-211ENST00000582648 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
ERBB2-211ENST00000582648 AKAP12Q02952 1782 aa25.44■■□□□ 1.66
ERBB2-211ENST00000582648 ST20-MTHFSA0A0A6YYL1 179 aa25.44■■□□□ 1.66
ERBB2-211ENST00000582648 FNBP4Q8N3X1 1017 aaPredicted RBP25.43■■□□□ 1.66
ERBB2-211ENST00000582648 QTRT2Q9H974 415 aaKnown RBP25.43■■□□□ 1.66
ERBB2-211ENST00000582648 USP6P35125 1406 aa25.43■■□□□ 1.66
ERBB2-211ENST00000582648 RXRBP28702 533 aa25.42■■□□□ 1.66
ERBB2-211ENST00000582648 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.42■■□□□ 1.66
ERBB2-211ENST00000582648 BCL9LQ86UU0 1499 aa25.4■■□□□ 1.66
ERBB2-211ENST00000582648 SLIT2O94813 1529 aa25.4■■□□□ 1.66
ERBB2-211ENST00000582648 ATRNO75882 1429 aa25.38■■□□□ 1.65
ERBB2-211ENST00000582648 NWD2Q9ULI1 1742 aa25.38■■□□□ 1.65
ERBB2-211ENST00000582648 ABTB2Q8N961 1025 aa25.38■■□□□ 1.65
ERBB2-211ENST00000582648 TESK2Q96S53 571 aa25.38■■□□□ 1.65
ERBB2-211ENST00000582648 TRPC5Q9UL62 973 aaPredicted RBP25.38■■□□□ 1.65
ERBB2-211ENST00000582648 NRKQ7Z2Y5 1582 aa25.38■■□□□ 1.65
ERBB2-211ENST00000582648 MON2Q7Z3U7 1717 aa25.37■■□□□ 1.65
ERBB2-211ENST00000582648 PIK3C2AO00443 1686 aa25.37■■□□□ 1.65
ERBB2-211ENST00000582648 COL14A1Q05707 1796 aaKnown RBP25.36■■□□□ 1.65
ERBB2-211ENST00000582648 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
ERBB2-211ENST00000582648 RGS12O14924 1447 aa25.36■■□□□ 1.65
ERBB2-211ENST00000582648 RBM6P78332 1123 aaKnown RBP25.35■■□□□ 1.65
ERBB2-211ENST00000582648 NRAPQ86VF7 1730 aa25.34■■□□□ 1.65
ERBB2-211ENST00000582648 CDK12Q9NYV4 1490 aaPredicted RBP25.34■■□□□ 1.65
ERBB2-211ENST00000582648 BRD4O60885 1362 aaPredicted RBP25.33■■□□□ 1.65
ERBB2-211ENST00000582648 FAM83GA6ND36 823 aa25.33■■□□□ 1.65
ERBB2-211ENST00000582648 CPSF1Q10570 1443 aaKnown RBP25.33■■□□□ 1.65
ERBB2-211ENST00000582648 SSH2Q76I76 1423 aa25.33■■□□□ 1.65
ERBB2-211ENST00000582648 UNC5CLQ8IV45 518 aa25.33■■□□□ 1.65
ERBB2-211ENST00000582648 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
ERBB2-211ENST00000582648 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
ERBB2-211ENST00000582648 KIAA0232Q92628 1395 aa25.31■■□□□ 1.64
ERBB2-211ENST00000582648 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
ERBB2-211ENST00000582648 ZC3H6P61129 1189 aaKnown RBP25.3■■□□□ 1.64
ERBB2-211ENST00000582648 USP19O94966 1318 aa25.3■■□□□ 1.64
ERBB2-211ENST00000582648 GLI3P10071 1580 aa25.3■■□□□ 1.64
ERBB2-211ENST00000582648 ZNF692Q9BU19 519 aaPredicted RBP25.29■■□□□ 1.64
ERBB2-211ENST00000582648 SLC12A5Q9H2X9 1139 aa25.29■■□□□ 1.64
ERBB2-211ENST00000582648 TTC21BQ7Z4L5 1316 aa25.29■■□□□ 1.64
ERBB2-211ENST00000582648 CHRNA2Q15822 529 aa25.28■■□□□ 1.64
ERBB2-211ENST00000582648 NLRP13Q86W25 1043 aa25.28■■□□□ 1.64
ERBB2-211ENST00000582648 BTG4Q9NY30 223 aa25.28■■□□□ 1.64
ERBB2-211ENST00000582648 NLRP6P59044 892 aa25.27■■□□□ 1.64
ERBB2-211ENST00000582648 TMF1P82094 1093 aa25.27■■□□□ 1.64
ERBB2-211ENST00000582648 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
ERBB2-211ENST00000582648 CCDC9Q9Y3X0 531 aaKnown RBP25.26■■□□□ 1.63
ERBB2-211ENST00000582648 A0A1W2PP64 1363 aa25.26■■□□□ 1.63
ERBB2-211ENST00000582648 SLIT3O75094 1523 aa25.26■■□□□ 1.63
ERBB2-211ENST00000582648 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
ERBB2-211ENST00000582648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.25■■□□□ 1.63
ERBB2-211ENST00000582648 SLC24A1O60721 1099 aa25.24■■□□□ 1.63
ERBB2-211ENST00000582648 PUS7Q96PZ0 661 aaKnown RBP25.24■■□□□ 1.63
ERBB2-211ENST00000582648 TTC21AQ8NDW8 1320 aa25.23■■□□□ 1.63
ERBB2-211ENST00000582648 ZBTB7CA1YPR0 619 aa25.23■■□□□ 1.63
ERBB2-211ENST00000582648 NINLQ9Y2I6 1382 aa25.22■■□□□ 1.63
ERBB2-211ENST00000582648 GCP02774 474 aa25.22■■□□□ 1.63
ERBB2-211ENST00000582648 VPS72Q15906 364 aa25.22■■□□□ 1.63
ERBB2-211ENST00000582648 SOX12O15370 315 aa25.21■■□□□ 1.63
ERBB2-211ENST00000582648 TERF2IPQ9NYB0 399 aa25.21■■□□□ 1.63
ERBB2-211ENST00000582648 EDC4Q6P2E9 1401 aaKnown RBP25.2■■□□□ 1.63
ERBB2-211ENST00000582648 MYOM1P52179 1685 aa25.2■■□□□ 1.63
ERBB2-211ENST00000582648 LMO7Q8WWI1 1683 aa25.2■■□□□ 1.63
ERBB2-211ENST00000582648 CPDO75976 1380 aa25.19■■□□□ 1.62
ERBB2-211ENST00000582648 USP54Q70EL1 1684 aa25.18■■□□□ 1.62
ERBB2-211ENST00000582648 NME9Q86XW9 330 aa25.18■■□□□ 1.62
ERBB2-211ENST00000582648 STRN4Q9NRL3 753 aa25.18■■□□□ 1.62
ERBB2-211ENST00000582648 ZRANB1Q9UGI0 708 aa25.18■■□□□ 1.62
ERBB2-211ENST00000582648 CAMTA1Q9Y6Y1 1673 aa25.17■■□□□ 1.62
ERBB2-211ENST00000582648 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
ERBB2-211ENST00000582648 HSPA5P11021 654 aaKnown RBP25.16■■□□□ 1.62
ERBB2-211ENST00000582648 EIF4G2P78344 907 aaKnown RBP eCLIP25.16■■□□□ 1.62
ERBB2-211ENST00000582648 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
ERBB2-211ENST00000582648 NFAT5O94916 1531 aa25.15■■□□□ 1.62
ERBB2-211ENST00000582648 ANKRD36BQ8N2N9 1353 aa25.15■■□□□ 1.62
ERBB2-211ENST00000582648 A0A0G2JS52 829 aa25.13■■□□□ 1.61
ERBB2-211ENST00000582648 MYT1Q01538 1121 aa25.13■■□□□ 1.61
ERBB2-211ENST00000582648 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
ERBB2-211ENST00000582648 COL18A1P39060 1754 aa25.11■■□□□ 1.61
ERBB2-211ENST00000582648 USP31Q70CQ4 1352 aa25.11■■□□□ 1.61
ERBB2-211ENST00000582648 FAM98CQ17RN3 349 aaKnown RBP25.11■■□□□ 1.61
ERBB2-211ENST00000582648 KCNH5Q8NCM2 988 aa25.11■■□□□ 1.61
ERBB2-211ENST00000582648 SPATA31A5Q5VU36 1347 aa25.11■■□□□ 1.61
ERBB2-211ENST00000582648 SPATA31A7Q8IWB4 1347 aa25.11■■□□□ 1.61
ERBB2-211ENST00000582648 COL5A2P05997 1499 aaPredicted RBP25.1■■□□□ 1.61
ERBB2-211ENST00000582648 EVA1CP58658 441 aa25.1■■□□□ 1.61
ERBB2-211ENST00000582648 SEPT12Q8IYM1 358 aa25.1■■□□□ 1.61
ERBB2-211ENST00000582648 LTN1O94822 1766 aa25.1■■□□□ 1.61
ERBB2-211ENST00000582648 RGPD5Q99666 1765 aa25.1■■□□□ 1.61
ERBB2-211ENST00000582648 OVOS2A0A0J9YW53 1432 aa25.1■■□□□ 1.61
ERBB2-211ENST00000582648 OVOS2Q6IE36 1432 aa25.1■■□□□ 1.61
ERBB2-211ENST00000582648 KIF20BQ96Q89 1820 aa25.08■■□□□ 1.61
ERBB2-211ENST00000582648 UPF1Q92900 1129 aaKnown RBP eCLIP25.08■■□□□ 1.615e-6■□□□□ 8.7
ERBB2-211ENST00000582648 USP35Q9P2H5 1018 aa25.08■■□□□ 1.61
ERBB2-211ENST00000582648 AATKQ6ZMQ8 1374 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms