RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 PLEKHH1Q9ULM0 1364 aa11.49□□□□□ -0.57
CCDC47-205ENST00000582331 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
CCDC47-205ENST00000582331 NWD2Q9ULI1 1742 aa11.49□□□□□ -0.57
CCDC47-205ENST00000582331 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
CCDC47-205ENST00000582331 FMN2Q9NZ56 1722 aa11.48□□□□□ -0.57
CCDC47-205ENST00000582331 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
CCDC47-205ENST00000582331 SBNO1A3KN83 1393 aa11.47□□□□□ -0.57
CCDC47-205ENST00000582331 PITPNM1O00562 1244 aa11.47□□□□□ -0.57
CCDC47-205ENST00000582331 RGL3Q3MIN7 710 aa11.47□□□□□ -0.57
CCDC47-205ENST00000582331 PPARGC1BQ86YN6 1023 aaKnown RBP11.47□□□□□ -0.57
CCDC47-205ENST00000582331 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
CCDC47-205ENST00000582331 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
CCDC47-205ENST00000582331 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
CCDC47-205ENST00000582331 BTG4Q9NY30 223 aa11.46□□□□□ -0.57
CCDC47-205ENST00000582331 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
CCDC47-205ENST00000582331 YTHDC2Q9H6S0 1430 aaKnown RBP11.44□□□□□ -0.58
CCDC47-205ENST00000582331 ANKRD30BQ9BXX2 1392 aa11.44□□□□□ -0.58
CCDC47-205ENST00000582331 KNDC1Q76NI1 1749 aa11.44□□□□□ -0.58
CCDC47-205ENST00000582331 YY1P25490 414 aa11.44□□□□□ -0.58
CCDC47-205ENST00000582331 EZH2Q15910 746 aaKnown RBP11.44□□□□□ -0.58
CCDC47-205ENST00000582331 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
CCDC47-205ENST00000582331 RGPD1P0DJD0 1748 aa11.43□□□□□ -0.58
CCDC47-205ENST00000582331 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
CCDC47-205ENST00000582331 RGPD8O14715 1765 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-205ENST00000582331 DISP2A7MBM2 1401 aa11.43□□□□□ -0.58
CCDC47-205ENST00000582331 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
CCDC47-205ENST00000582331 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
CCDC47-205ENST00000582331 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
CCDC47-205ENST00000582331 NRAPQ86VF7 1730 aa11.41□□□□□ -0.58
CCDC47-205ENST00000582331 TRIM37O94972 964 aa11.41□□□□□ -0.58
CCDC47-205ENST00000582331 CAMKK2Q96RR4 588 aa11.41□□□□□ -0.58
CCDC47-205ENST00000582331 IFT172Q9UG01 1749 aa11.4□□□□□ -0.58
CCDC47-205ENST00000582331 SAFB2Q14151 953 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC47-205ENST00000582331 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
CCDC47-205ENST00000582331 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-205ENST00000582331 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
CCDC47-205ENST00000582331 C14orf93Q9H972 538 aaKnown RBP11.4□□□□□ -0.58
CCDC47-205ENST00000582331 PIK3C2GO75747 1445 aa11.4□□□□□ -0.58
CCDC47-205ENST00000582331 SPATA31E1Q6ZUB1 1445 aa11.4□□□□□ -0.58
CCDC47-205ENST00000582331 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.59
CCDC47-205ENST00000582331 COL14A1Q05707 1796 aaKnown RBP11.39□□□□□ -0.59
CCDC47-205ENST00000582331 APBA3O96018 575 aa11.39□□□□□ -0.59
CCDC47-205ENST00000582331 POGKQ9P215 609 aa11.39□□□□□ -0.59
CCDC47-205ENST00000582331 NBPF8Q3BBV2 869 aa11.38□□□□□ -0.59
CCDC47-205ENST00000582331 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
CCDC47-205ENST00000582331 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
CCDC47-205ENST00000582331 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
CCDC47-205ENST00000582331 GPRASP1Q5JY77 1395 aa11.38□□□□□ -0.59
CCDC47-205ENST00000582331 PARD3Q8TEW0 1356 aa11.38□□□□□ -0.59
CCDC47-205ENST00000582331 TNS1Q9HBL0 1735 aaKnown RBP11.38□□□□□ -0.59
CCDC47-205ENST00000582331 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
CCDC47-205ENST00000582331 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC47-205ENST00000582331 PRDM11Q9NQV5 511 aa11.37□□□□□ -0.59
CCDC47-205ENST00000582331 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
CCDC47-205ENST00000582331 THSD7AQ9UPZ6 1657 aa11.36□□□□□ -0.59
CCDC47-205ENST00000582331 SPATA31A1Q5TZJ5 1347 aa11.36□□□□□ -0.59
CCDC47-205ENST00000582331 PPP1R1BQ9UD71 204 aaPredicted RBP11.36□□□□□ -0.59
CCDC47-205ENST00000582331 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
CCDC47-205ENST00000582331 TRPM3Q9HCF6 1732 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-205ENST00000582331 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-205ENST00000582331 PDE3BQ13370 1112 aa11.35□□□□□ -0.59
CCDC47-205ENST00000582331 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
CCDC47-205ENST00000582331 SPON1Q9HCB6 807 aa11.35□□□□□ -0.59
CCDC47-205ENST00000582331 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
CCDC47-205ENST00000582331 ALS2Q96Q42 1657 aa11.34□□□□□ -0.59
CCDC47-205ENST00000582331 NGDNQ8NEJ9 315 aaKnown RBP11.34□□□□□ -0.59
CCDC47-205ENST00000582331 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
CCDC47-205ENST00000582331 KCNQ2O43526 872 aa11.33□□□□□ -0.6
CCDC47-205ENST00000582331 EVA1CP58658 441 aa11.33□□□□□ -0.6
CCDC47-205ENST00000582331 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
CCDC47-205ENST00000582331 HIRIP3Q9BW71 556 aaPredicted RBP11.33□□□□□ -0.6
CCDC47-205ENST00000582331 KIAA0232Q92628 1395 aa11.32□□□□□ -0.6
CCDC47-205ENST00000582331 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
CCDC47-205ENST00000582331 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
CCDC47-205ENST00000582331 PRR36Q9H6K5 1346 aa11.32□□□□□ -0.6
CCDC47-205ENST00000582331 DLC1Q96QB1 1528 aa11.31□□□□□ -0.6
CCDC47-205ENST00000582331 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
CCDC47-205ENST00000582331 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
CCDC47-205ENST00000582331 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
CCDC47-205ENST00000582331 RREB1Q92766 1687 aa11.3□□□□□ -0.6
CCDC47-205ENST00000582331 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
CCDC47-205ENST00000582331 WASLO00401 505 aaPredicted RBP11.3□□□□□ -0.6
CCDC47-205ENST00000582331 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
CCDC47-205ENST00000582331 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
CCDC47-205ENST00000582331 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
CCDC47-205ENST00000582331 TCP11L2Q8N4U5 519 aa11.28□□□□□ -0.6
CCDC47-205ENST00000582331 TULP4Q9NRJ4 1543 aa11.28□□□□□ -0.6
CCDC47-205ENST00000582331 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
CCDC47-205ENST00000582331 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
CCDC47-205ENST00000582331 LARP1Q6PKG0 1096 aaKnown RBP11.27□□□□□ -0.61
CCDC47-205ENST00000582331 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
CCDC47-205ENST00000582331 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
CCDC47-205ENST00000582331 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
CCDC47-205ENST00000582331 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
CCDC47-205ENST00000582331 PHRF1Q9P1Y6 1649 aaKnown RBP11.24□□□□□ -0.61
CCDC47-205ENST00000582331 PLSCR1O15162 318 aa11.24□□□□□ -0.61
CCDC47-205ENST00000582331 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
CCDC47-205ENST00000582331 ATP7BP35670 1465 aa11.24□□□□□ -0.61
CCDC47-205ENST00000582331 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
CCDC47-205ENST00000582331 ABTB2Q8N961 1025 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms