RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
PPP4R1-220ENST00000581835 HAP1P54257 671 aaPredicted RBP14.56□□□□□ -0.08
PPP4R1-220ENST00000581835 CABP1Q9NZU7 370 aa14.56□□□□□ -0.08
PPP4R1-220ENST00000581835 BCL9LQ86UU0 1499 aa14.56□□□□□ -0.08
PPP4R1-220ENST00000581835 CRYBG1Q9Y4K1 1723 aa14.55□□□□□ -0.08
PPP4R1-220ENST00000581835 RBM6P78332 1123 aaKnown RBP14.55□□□□□ -0.08
PPP4R1-220ENST00000581835 TRPC5Q9UL62 973 aaPredicted RBP14.55□□□□□ -0.08
PPP4R1-220ENST00000581835 SLIT2O94813 1529 aa14.54□□□□□ -0.08
PPP4R1-220ENST00000581835 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.54□□□□□ -0.08
PPP4R1-220ENST00000581835 CDK12Q9NYV4 1490 aaPredicted RBP14.53□□□□□ -0.08
PPP4R1-220ENST00000581835 ATRNO75882 1429 aa14.53□□□□□ -0.08
PPP4R1-220ENST00000581835 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
PPP4R1-220ENST00000581835 NWD2Q9ULI1 1742 aa14.52□□□□□ -0.09
PPP4R1-220ENST00000581835 PLCH1Q4KWH8 1693 aa14.52□□□□□ -0.09
PPP4R1-220ENST00000581835 USP6P35125 1406 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 FAM83GA6ND36 823 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 UNC5CLQ8IV45 518 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 AKAP12Q02952 1782 aa14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 PHRF1Q9P1Y6 1649 aaKnown RBP14.51□□□□□ -0.09
PPP4R1-220ENST00000581835 NUTM2GQ5VZR2 741 aa14.5□□□□□ -0.09
PPP4R1-220ENST00000581835 TESK2Q96S53 571 aa14.5□□□□□ -0.09
PPP4R1-220ENST00000581835 SSH2Q76I76 1423 aa14.49□□□□□ -0.09
PPP4R1-220ENST00000581835 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
PPP4R1-220ENST00000581835 COL14A1Q05707 1796 aaKnown RBP14.49□□□□□ -0.09
PPP4R1-220ENST00000581835 RGS12O14924 1447 aa14.49□□□□□ -0.09
PPP4R1-220ENST00000581835 GJD4Q96KN9 370 aaPredicted RBP14.48□□□□□ -0.09
PPP4R1-220ENST00000581835 PUS7Q96PZ0 661 aaKnown RBP14.48□□□□□ -0.09
PPP4R1-220ENST00000581835 CPSF1Q10570 1443 aaKnown RBP14.48□□□□□ -0.09
PPP4R1-220ENST00000581835 USP47Q96K76 1375 aa14.47□□□□□ -0.09
PPP4R1-220ENST00000581835 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
PPP4R1-220ENST00000581835 NLRP13Q86W25 1043 aa14.47□□□□□ -0.09
PPP4R1-220ENST00000581835 USP19O94966 1318 aa14.46□□□□□ -0.09
PPP4R1-220ENST00000581835 BTG4Q9NY30 223 aa14.46□□□□□ -0.09
PPP4R1-220ENST00000581835 GLI3P10071 1580 aa14.46□□□□□ -0.09
PPP4R1-220ENST00000581835 NRKQ7Z2Y5 1582 aa14.46□□□□□ -0.09
PPP4R1-220ENST00000581835 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.1
PPP4R1-220ENST00000581835 NRAPQ86VF7 1730 aa14.46□□□□□ -0.1
PPP4R1-220ENST00000581835 KIAA0232Q92628 1395 aa14.46□□□□□ -0.1
PPP4R1-220ENST00000581835 PIK3C2AO00443 1686 aa14.46□□□□□ -0.1
PPP4R1-220ENST00000581835 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
PPP4R1-220ENST00000581835 VPS72Q15906 364 aa14.45□□□□□ -0.1
PPP4R1-220ENST00000581835 PRDM11Q9NQV5 511 aa14.45□□□□□ -0.1
PPP4R1-220ENST00000581835 KTN1Q86UP2 1357 aaKnown RBP14.45□□□□□ -0.1
PPP4R1-220ENST00000581835 CD163L1Q9NR16 1453 aa14.44□□□□□ -0.1
PPP4R1-220ENST00000581835 TTC21BQ7Z4L5 1316 aa14.44□□□□□ -0.1
PPP4R1-220ENST00000581835 NLRP6P59044 892 aa14.44□□□□□ -0.1
PPP4R1-220ENST00000581835 TMC1Q8TDI8 760 aa14.44□□□□□ -0.1
PPP4R1-220ENST00000581835 SLC12A5Q9H2X9 1139 aa14.44□□□□□ -0.1
PPP4R1-220ENST00000581835 GCP02774 474 aa14.43□□□□□ -0.1
PPP4R1-220ENST00000581835 CHRNA2Q15822 529 aa14.43□□□□□ -0.1
PPP4R1-220ENST00000581835 TTC21AQ8NDW8 1320 aa14.42□□□□□ -0.1
PPP4R1-220ENST00000581835 CCDC9Q9Y3X0 531 aaKnown RBP14.42□□□□□ -0.1
PPP4R1-220ENST00000581835 CPDO75976 1380 aa14.42□□□□□ -0.1
PPP4R1-220ENST00000581835 SLIT3O75094 1523 aa14.41□□□□□ -0.1
PPP4R1-220ENST00000581835 TMF1P82094 1093 aa14.41□□□□□ -0.1
PPP4R1-220ENST00000581835 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
PPP4R1-220ENST00000581835 UPF1Q92900 1129 aaKnown RBP eCLIP14.41□□□□□ -0.1
PPP4R1-220ENST00000581835 NINLQ9Y2I6 1382 aa14.4□□□□□ -0.1
PPP4R1-220ENST00000581835 ONECUT3O60422 494 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-220ENST00000581835 TERF2IPQ9NYB0 399 aa14.4□□□□□ -0.1
PPP4R1-220ENST00000581835 BRWD3Q6RI45 1802 aa14.4□□□□□ -0.1
PPP4R1-220ENST00000581835 LMO7Q8WWI1 1683 aa14.39□□□□□ -0.11
PPP4R1-220ENST00000581835 EP400Q96L91 3159 aa14.39□□□□□ -0.11
PPP4R1-220ENST00000581835 A0A1W2PP64 1363 aa14.39□□□□□ -0.11
PPP4R1-220ENST00000581835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.39□□□□□ -0.111e-7■■□□□ 14.3
PPP4R1-220ENST00000581835 CAMTA1Q9Y6Y1 1673 aa14.39□□□□□ -0.11
PPP4R1-220ENST00000581835 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-220ENST00000581835 SPATA31A5Q5VU36 1347 aa14.38□□□□□ -0.11
PPP4R1-220ENST00000581835 SPATA31A7Q8IWB4 1347 aa14.38□□□□□ -0.11
PPP4R1-220ENST00000581835 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
PPP4R1-220ENST00000581835 SEPT12Q8IYM1 358 aa14.37□□□□□ -0.11
PPP4R1-220ENST00000581835 KCNH5Q8NCM2 988 aa14.37□□□□□ -0.11
PPP4R1-220ENST00000581835 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
PPP4R1-220ENST00000581835 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
PPP4R1-220ENST00000581835 USP31Q70CQ4 1352 aa14.36□□□□□ -0.11
PPP4R1-220ENST00000581835 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
PPP4R1-220ENST00000581835 NME9Q86XW9 330 aa14.36□□□□□ -0.11
PPP4R1-220ENST00000581835 COL18A1P39060 1754 aa14.36□□□□□ -0.11
PPP4R1-220ENST00000581835 EVA1CP58658 441 aa14.35□□□□□ -0.11
PPP4R1-220ENST00000581835 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
PPP4R1-220ENST00000581835 SPATA31A1Q5TZJ5 1347 aa14.35□□□□□ -0.11
PPP4R1-220ENST00000581835 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
PPP4R1-220ENST00000581835 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
PPP4R1-220ENST00000581835 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
PPP4R1-220ENST00000581835 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
PPP4R1-220ENST00000581835 ARHGEF25Q86VW2 580 aa14.34□□□□□ -0.11
PPP4R1-220ENST00000581835 NFAT5O94916 1531 aa14.34□□□□□ -0.11
PPP4R1-220ENST00000581835 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-220ENST00000581835 SOX12O15370 315 aa14.33□□□□□ -0.12
PPP4R1-220ENST00000581835 EIF4G2P78344 907 aaKnown RBP eCLIP14.33□□□□□ -0.12
PPP4R1-220ENST00000581835 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-220ENST00000581835 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
PPP4R1-220ENST00000581835 AXIN2Q9Y2T1 843 aa14.32□□□□□ -0.12
PPP4R1-220ENST00000581835 MYOM1P52179 1685 aa14.32□□□□□ -0.12
PPP4R1-220ENST00000581835 THSD7AQ9UPZ6 1657 aa14.32□□□□□ -0.12
PPP4R1-220ENST00000581835 A0A0G2JS52 829 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms