RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 SRPK2P78362 688 aaKnown RBP21.45■■□□□ 1.02
ATPAF2-211ENST00000581698 NGDNQ8NEJ9 315 aaKnown RBP21.45■■□□□ 1.02
ATPAF2-211ENST00000581698 ATRNO75882 1429 aa21.45■■□□□ 1.02
ATPAF2-211ENST00000581698 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
ATPAF2-211ENST00000581698 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
ATPAF2-211ENST00000581698 CABP1Q9NZU7 370 aa21.43■■□□□ 1.02
ATPAF2-211ENST00000581698 EVC2Q86UK5 1308 aa21.43■■□□□ 1.02
ATPAF2-211ENST00000581698 USP6P35125 1406 aa21.43■■□□□ 1.02
ATPAF2-211ENST00000581698 PIK3C2AO00443 1686 aa21.43■■□□□ 1.02
ATPAF2-211ENST00000581698 CPSF1Q10570 1443 aaKnown RBP21.42■■□□□ 1.02
ATPAF2-211ENST00000581698 RGS12O14924 1447 aa21.41■■□□□ 1.02
ATPAF2-211ENST00000581698 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
ATPAF2-211ENST00000581698 GLI3P10071 1580 aa21.4■■□□□ 1.02
ATPAF2-211ENST00000581698 NGLY1Q96IV0 654 aa21.4■■□□□ 1.02
ATPAF2-211ENST00000581698 TIMELESSQ9UNS1 1208 aa21.4■■□□□ 1.02
ATPAF2-211ENST00000581698 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
ATPAF2-211ENST00000581698 ST20-MTHFSA0A0A6YYL1 179 aa21.39■■□□□ 1.01
ATPAF2-211ENST00000581698 PLEKHG5O94827 1062 aa21.39■■□□□ 1.01
ATPAF2-211ENST00000581698 CDK12Q9NYV4 1490 aaPredicted RBP21.39■■□□□ 1.01
ATPAF2-211ENST00000581698 USP47Q96K76 1375 aa21.38■■□□□ 1.01
ATPAF2-211ENST00000581698 LMOD2Q6P5Q4 547 aa21.38■■□□□ 1.01
ATPAF2-211ENST00000581698 USP19O94966 1318 aa21.37■■□□□ 1.01
ATPAF2-211ENST00000581698 FAM83GA6ND36 823 aa21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 NUTM2GQ5VZR2 741 aa21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 QTRT2Q9H974 415 aaKnown RBP21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 USP21Q9UK80 565 aa21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
ATPAF2-211ENST00000581698 SLIT3O75094 1523 aa21.35■■□□□ 1.01
ATPAF2-211ENST00000581698 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
ATPAF2-211ENST00000581698 LMO7Q8WWI1 1683 aa21.34■■□□□ 1.01
ATPAF2-211ENST00000581698 USP54Q70EL1 1684 aa21.33■■□□□ 1
ATPAF2-211ENST00000581698 RXRBP28702 533 aa21.32■■□□□ 1
ATPAF2-211ENST00000581698 EP400Q96L91 3159 aa21.32■■□□□ 1
ATPAF2-211ENST00000581698 MYOM1P52179 1685 aa21.31■■□□□ 1
ATPAF2-211ENST00000581698 BRD4O60885 1362 aaPredicted RBP21.31■■□□□ 1
ATPAF2-211ENST00000581698 RBM6P78332 1123 aaKnown RBP21.3■■□□□ 1
ATPAF2-211ENST00000581698 UNC5CLQ8IV45 518 aa21.3■■□□□ 1
ATPAF2-211ENST00000581698 KIAA0232Q92628 1395 aa21.3■■□□□ 1
ATPAF2-211ENST00000581698 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
ATPAF2-211ENST00000581698 TTC21BQ7Z4L5 1316 aa21.29■■□□□ 1
ATPAF2-211ENST00000581698 COL18A1P39060 1754 aa21.28■■□□□ 1
ATPAF2-211ENST00000581698 A0A1W2PP64 1363 aa21.28■■□□□ 1
ATPAF2-211ENST00000581698 TRPC5Q9UL62 973 aaPredicted RBP21.28■■□□□ 1
ATPAF2-211ENST00000581698 ABTB2Q8N961 1025 aa21.27■■□□□ 1
ATPAF2-211ENST00000581698 PUS7Q96PZ0 661 aaKnown RBP21.27■■□□□ 1
ATPAF2-211ENST00000581698 NFAT5O94916 1531 aa21.27■■□□□ 1
ATPAF2-211ENST00000581698 CAMTA1Q9Y6Y1 1673 aa21.27■■□□□ 1
ATPAF2-211ENST00000581698 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
ATPAF2-211ENST00000581698 CPDO75976 1380 aa21.25■□□□□ 0.99
ATPAF2-211ENST00000581698 KTN1Q86UP2 1357 aaKnown RBP21.25■□□□□ 0.99
ATPAF2-211ENST00000581698 BRWD3Q6RI45 1802 aa21.25■□□□□ 0.99
ATPAF2-211ENST00000581698 CHRNA2Q15822 529 aa21.24■□□□□ 0.99
ATPAF2-211ENST00000581698 GJD4Q96KN9 370 aaPredicted RBP21.24■□□□□ 0.99
ATPAF2-211ENST00000581698 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
ATPAF2-211ENST00000581698 ZC3H6P61129 1189 aaKnown RBP21.23■□□□□ 0.99
ATPAF2-211ENST00000581698 VPS72Q15906 364 aa21.23■□□□□ 0.99
ATPAF2-211ENST00000581698 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
ATPAF2-211ENST00000581698 THSD7AQ9UPZ6 1657 aa21.21■□□□□ 0.99
ATPAF2-211ENST00000581698 GCP02774 474 aa21.21■□□□□ 0.99
ATPAF2-211ENST00000581698 ZNF692Q9BU19 519 aaPredicted RBP21.21■□□□□ 0.99
ATPAF2-211ENST00000581698 USP31Q70CQ4 1352 aa21.21■□□□□ 0.99
ATPAF2-211ENST00000581698 EDC4Q6P2E9 1401 aaKnown RBP21.21■□□□□ 0.99
ATPAF2-211ENST00000581698 PRDM11Q9NQV5 511 aa21.2■□□□□ 0.98
ATPAF2-211ENST00000581698 NLRP6P59044 892 aa21.19■□□□□ 0.98
ATPAF2-211ENST00000581698 NLRP13Q86W25 1043 aa21.19■□□□□ 0.98
ATPAF2-211ENST00000581698 NME9Q86XW9 330 aa21.19■□□□□ 0.98
ATPAF2-211ENST00000581698 TTC21AQ8NDW8 1320 aa21.19■□□□□ 0.98
ATPAF2-211ENST00000581698 OVOS2A0A0J9YW53 1432 aa21.19■□□□□ 0.98
ATPAF2-211ENST00000581698 OVOS2Q6IE36 1432 aa21.19■□□□□ 0.98
ATPAF2-211ENST00000581698 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
ATPAF2-211ENST00000581698 RGPD5Q99666 1765 aa21.18■□□□□ 0.98
ATPAF2-211ENST00000581698 ONECUT3O60422 494 aaPredicted RBP21.17■□□□□ 0.98
ATPAF2-211ENST00000581698 NINLQ9Y2I6 1382 aa21.17■□□□□ 0.98
ATPAF2-211ENST00000581698 COL5A2P05997 1499 aaPredicted RBP21.17■□□□□ 0.98
ATPAF2-211ENST00000581698 SPATA31A5Q5VU36 1347 aa21.16■□□□□ 0.98
ATPAF2-211ENST00000581698 SPATA31A7Q8IWB4 1347 aa21.16■□□□□ 0.98
ATPAF2-211ENST00000581698 UPF1Q92900 1129 aaKnown RBP eCLIP21.16■□□□□ 0.98
ATPAF2-211ENST00000581698 ANKRD36BQ8N2N9 1353 aa21.15■□□□□ 0.98
ATPAF2-211ENST00000581698 HSPA5P11021 654 aaKnown RBP21.15■□□□□ 0.98
ATPAF2-211ENST00000581698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATPAF2-211ENST00000581698 TMF1P82094 1093 aa21.14■□□□□ 0.97
ATPAF2-211ENST00000581698 AATKQ6ZMQ8 1374 aa21.13■□□□□ 0.97
ATPAF2-211ENST00000581698 ARHGEF25Q86VW2 580 aa21.13■□□□□ 0.97
ATPAF2-211ENST00000581698 AXIN2Q9Y2T1 843 aa21.13■□□□□ 0.97
ATPAF2-211ENST00000581698 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
ATPAF2-211ENST00000581698 LTN1O94822 1766 aa21.12■□□□□ 0.97
ATPAF2-211ENST00000581698 SPATA31A1Q5TZJ5 1347 aa21.11■□□□□ 0.97
ATPAF2-211ENST00000581698 LARP1Q6PKG0 1096 aaKnown RBP21.1■□□□□ 0.97
ATPAF2-211ENST00000581698 HDGFL2Q7Z4V5 671 aaPredicted RBP21.1■□□□□ 0.97
ATPAF2-211ENST00000581698 CARD14Q9BXL6 1004 aa21.1■□□□□ 0.97
ATPAF2-211ENST00000581698 WNK3Q9BYP7 1800 aa21.09■□□□□ 0.97
ATPAF2-211ENST00000581698 SEPT12Q8IYM1 358 aa21.09■□□□□ 0.97
ATPAF2-211ENST00000581698 TERF2IPQ9NYB0 399 aa21.09■□□□□ 0.97
ATPAF2-211ENST00000581698 ABCC6O95255 1503 aa21.09■□□□□ 0.97
ATPAF2-211ENST00000581698 FAM98CQ17RN3 349 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-211ENST00000581698 KIF20BQ96Q89 1820 aa21.08■□□□□ 0.96
ATPAF2-211ENST00000581698 SOX12O15370 315 aa21.07■□□□□ 0.96
ATPAF2-211ENST00000581698 STRN4Q9NRL3 753 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms