RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
DDX42-213ENST00000581477 ST20-MTHFSA0A0A6YYL1 179 aa9.98□□□□□ -0.81
DDX42-213ENST00000581477 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
DDX42-213ENST00000581477 METP08581 1390 aa9.98□□□□□ -0.81
DDX42-213ENST00000581477 LRPPRCP42704 1394 aaKnown RBP9.98□□□□□ -0.81
DDX42-213ENST00000581477 ABCC11Q96J66 1382 aa9.98□□□□□ -0.81
DDX42-213ENST00000581477 YTHDC2Q9H6S0 1430 aaKnown RBP9.98□□□□□ -0.81
DDX42-213ENST00000581477 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
DDX42-213ENST00000581477 EIF3AQ14152 1382 aaKnown RBP9.97□□□□□ -0.81
DDX42-213ENST00000581477 PIK3R4Q99570 1358 aa9.97□□□□□ -0.81
DDX42-213ENST00000581477 TECPR2O15040 1411 aa9.97□□□□□ -0.81
DDX42-213ENST00000581477 NPHP4O75161 1426 aaPredicted RBP9.97□□□□□ -0.81
DDX42-213ENST00000581477 DLC1Q96QB1 1528 aa9.97□□□□□ -0.81
DDX42-213ENST00000581477 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
DDX42-213ENST00000581477 VARS2Q5ST30 1063 aaKnown RBP9.96□□□□□ -0.82
DDX42-213ENST00000581477 BCANQ96GW7 911 aa9.96□□□□□ -0.82
DDX42-213ENST00000581477 SLC26A8Q96RN1 970 aa9.96□□□□□ -0.82
DDX42-213ENST00000581477 TESK2Q96S53 571 aa9.96□□□□□ -0.82
DDX42-213ENST00000581477 HIRIP3Q9BW71 556 aaPredicted RBP9.96□□□□□ -0.82
DDX42-213ENST00000581477 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
DDX42-213ENST00000581477 ARHGEF28Q8N1W1 1705 aaKnown RBP9.96□□□□□ -0.82
DDX42-213ENST00000581477 TRAK1Q9UPV9 953 aa9.95□□□□□ -0.82
DDX42-213ENST00000581477 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
DDX42-213ENST00000581477 KNDC1Q76NI1 1749 aa9.95□□□□□ -0.82
DDX42-213ENST00000581477 STRCQ7RTU9 1775 aa9.94□□□□□ -0.82
DDX42-213ENST00000581477 FAM135BQ49AJ0 1406 aa9.94□□□□□ -0.82
DDX42-213ENST00000581477 PTPRUQ92729 1446 aa9.94□□□□□ -0.82
DDX42-213ENST00000581477 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
DDX42-213ENST00000581477 HSPA2P54652 639 aa9.94□□□□□ -0.82
DDX42-213ENST00000581477 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
DDX42-213ENST00000581477 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
DDX42-213ENST00000581477 CPS1P31327 1500 aa9.93□□□□□ -0.82
DDX42-213ENST00000581477 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
DDX42-213ENST00000581477 CHD2O14647 1828 aaKnown RBP9.93□□□□□ -0.82
DDX42-213ENST00000581477 STK26Q9P289 416 aa9.92□□□□□ -0.82
DDX42-213ENST00000581477 XRN1Q8IZH2 1706 aaKnown RBP9.92□□□□□ -0.82
DDX42-213ENST00000581477 CCDC7Q96M83 1385 aa9.91□□□□□ -0.82
DDX42-213ENST00000581477 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
DDX42-213ENST00000581477 QRICH2Q9H0J4 1663 aa9.91□□□□□ -0.82
DDX42-213ENST00000581477 TMF1P82094 1093 aa9.91□□□□□ -0.82
DDX42-213ENST00000581477 AMOTL2Q9Y2J4 779 aa9.91□□□□□ -0.82
DDX42-213ENST00000581477 PTCH1Q13635 1447 aa9.9□□□□□ -0.82
DDX42-213ENST00000581477 KIF7Q2M1P5 1343 aa9.9□□□□□ -0.82
DDX42-213ENST00000581477 KCNA6P17658 529 aa9.9□□□□□ -0.82
DDX42-213ENST00000581477 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
DDX42-213ENST00000581477 PRAM1Q96QH2 718 aa9.9□□□□□ -0.82
DDX42-213ENST00000581477 ROBO2Q9HCK4 1378 aa9.89□□□□□ -0.83
DDX42-213ENST00000581477 NWD1Q149M9 1564 aa9.89□□□□□ -0.83
DDX42-213ENST00000581477 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
DDX42-213ENST00000581477 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
DDX42-213ENST00000581477 WAPLQ7Z5K2 1190 aa9.89□□□□□ -0.83
DDX42-213ENST00000581477 POGKQ9P215 609 aa9.89□□□□□ -0.83
DDX42-213ENST00000581477 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
DDX42-213ENST00000581477 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
DDX42-213ENST00000581477 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
DDX42-213ENST00000581477 GSE1Q14687 1217 aa9.88□□□□□ -0.83
DDX42-213ENST00000581477 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
DDX42-213ENST00000581477 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
DDX42-213ENST00000581477 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
DDX42-213ENST00000581477 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
DDX42-213ENST00000581477 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.86□□□□□ -0.83
DDX42-213ENST00000581477 TULP4Q9NRJ4 1543 aa9.86□□□□□ -0.83
DDX42-213ENST00000581477 NKTRP30414 1462 aaKnown RBP9.85□□□□□ -0.83
DDX42-213ENST00000581477 SAFB2Q14151 953 aaKnown RBP eCLIP9.85□□□□□ -0.83
DDX42-213ENST00000581477 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
DDX42-213ENST00000581477 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
DDX42-213ENST00000581477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.831e-14■■□□□ 13.2
DDX42-213ENST00000581477 MINK1Q8N4C8 1332 aaPredicted RBP9.84□□□□□ -0.83
DDX42-213ENST00000581477 NCOA3Q9Y6Q9 1424 aa9.84□□□□□ -0.83
DDX42-213ENST00000581477 STRCP1A6NGW2 1772 aa9.84□□□□□ -0.83
DDX42-213ENST00000581477 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
DDX42-213ENST00000581477 DDX10Q13206 875 aaKnown RBP9.84□□□□□ -0.83
DDX42-213ENST00000581477 DIEXFQ68CQ4 756 aaKnown RBP9.83□□□□□ -0.84
DDX42-213ENST00000581477 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
DDX42-213ENST00000581477 CDK19Q9BWU1 502 aa9.83□□□□□ -0.84
DDX42-213ENST00000581477 CHRM1P11229 460 aaPredicted RBP9.82□□□□□ -0.84
DDX42-213ENST00000581477 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
DDX42-213ENST00000581477 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
DDX42-213ENST00000581477 ATAD2Q6PL18 1390 aa9.82□□□□□ -0.84
DDX42-213ENST00000581477 MYOM1P52179 1685 aa9.82□□□□□ -0.84
DDX42-213ENST00000581477 NINLQ9Y2I6 1382 aa9.81□□□□□ -0.84
DDX42-213ENST00000581477 PROSER2Q86WR7 435 aaPredicted RBP9.81□□□□□ -0.84
DDX42-213ENST00000581477 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
DDX42-213ENST00000581477 NALCNQ8IZF0 1738 aa9.8□□□□□ -0.84
DDX42-213ENST00000581477 G3V3G9 751 aa9.8□□□□□ -0.84
DDX42-213ENST00000581477 PER1O15534 1290 aaPredicted RBP9.8□□□□□ -0.84
DDX42-213ENST00000581477 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
DDX42-213ENST00000581477 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
DDX42-213ENST00000581477 PCDHB8Q9UN66 801 aa9.8□□□□□ -0.84
DDX42-213ENST00000581477 ZNF335Q9H4Z2 1342 aaPredicted RBP9.8□□□□□ -0.84
DDX42-213ENST00000581477 CDC42BPGQ6DT37 1551 aa9.8□□□□□ -0.84
DDX42-213ENST00000581477 POLR3GLQ9BT43 218 aa9.79□□□□□ -0.84
DDX42-213ENST00000581477 C19orf44Q9H6X5 657 aa9.79□□□□□ -0.84
DDX42-213ENST00000581477 ZSWIM6Q9HCJ5 1215 aa9.79□□□□□ -0.84
DDX42-213ENST00000581477 TMEM94Q12767 1356 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 LRRC7Q96NW7 1537 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
DDX42-213ENST00000581477 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 DCCP43146 1447 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 ANKARQ7Z5J8 1434 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms