RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
PPP4R1-219ENST00000581250 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
PPP4R1-219ENST00000581250 NUTM2GQ5VZR2 741 aa16.87■□□□□ 0.29
PPP4R1-219ENST00000581250 FNBP4Q8N3X1 1017 aaPredicted RBP16.87■□□□□ 0.29
PPP4R1-219ENST00000581250 CCER1Q8TC90 406 aaPredicted RBP16.87■□□□□ 0.29
PPP4R1-219ENST00000581250 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 SBNO2Q9Y2G9 1366 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 RGS12O14924 1447 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 ATRNO75882 1429 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 SLIT2O94813 1529 aa16.86■□□□□ 0.29
PPP4R1-219ENST00000581250 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
PPP4R1-219ENST00000581250 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
PPP4R1-219ENST00000581250 RBM6P78332 1123 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-219ENST00000581250 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-219ENST00000581250 CDK12Q9NYV4 1490 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-219ENST00000581250 USP6P35125 1406 aa16.83■□□□□ 0.28
PPP4R1-219ENST00000581250 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.28
PPP4R1-219ENST00000581250 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
PPP4R1-219ENST00000581250 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
PPP4R1-219ENST00000581250 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
PPP4R1-219ENST00000581250 USP47Q96K76 1375 aa16.81■□□□□ 0.28
PPP4R1-219ENST00000581250 ABTB2Q8N961 1025 aa16.81■□□□□ 0.28
PPP4R1-219ENST00000581250 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
PPP4R1-219ENST00000581250 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
PPP4R1-219ENST00000581250 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
PPP4R1-219ENST00000581250 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
PPP4R1-219ENST00000581250 GLI3P10071 1580 aa16.8■□□□□ 0.28
PPP4R1-219ENST00000581250 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
PPP4R1-219ENST00000581250 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
PPP4R1-219ENST00000581250 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
PPP4R1-219ENST00000581250 ZC3H6P61129 1189 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-219ENST00000581250 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
PPP4R1-219ENST00000581250 TESK2Q96S53 571 aa16.77■□□□□ 0.28
PPP4R1-219ENST00000581250 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-219ENST00000581250 USP19O94966 1318 aa16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 SSH2Q76I76 1423 aa16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
PPP4R1-219ENST00000581250 CD163L1Q9NR16 1453 aa16.74■□□□□ 0.27
PPP4R1-219ENST00000581250 NLRP6P59044 892 aa16.74■□□□□ 0.27
PPP4R1-219ENST00000581250 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
PPP4R1-219ENST00000581250 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
PPP4R1-219ENST00000581250 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
PPP4R1-219ENST00000581250 VPS72Q15906 364 aa16.73■□□□□ 0.27
PPP4R1-219ENST00000581250 SLIT3O75094 1523 aa16.73■□□□□ 0.27
PPP4R1-219ENST00000581250 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
PPP4R1-219ENST00000581250 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
PPP4R1-219ENST00000581250 EP400Q96L91 3159 aa16.72■□□□□ 0.27
PPP4R1-219ENST00000581250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.271e-7■■□□□ 14.3
PPP4R1-219ENST00000581250 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
PPP4R1-219ENST00000581250 A0A1W2PP64 1363 aa16.71■□□□□ 0.27
PPP4R1-219ENST00000581250 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
PPP4R1-219ENST00000581250 SOX12O15370 315 aa16.7■□□□□ 0.26
PPP4R1-219ENST00000581250 GCP02774 474 aa16.7■□□□□ 0.26
PPP4R1-219ENST00000581250 STRN4Q9NRL3 753 aa16.7■□□□□ 0.26
PPP4R1-219ENST00000581250 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
PPP4R1-219ENST00000581250 CPDO75976 1380 aa16.69■□□□□ 0.26
PPP4R1-219ENST00000581250 A0A0G2JS52 829 aa16.69■□□□□ 0.26
PPP4R1-219ENST00000581250 MYT1Q01538 1121 aa16.69■□□□□ 0.26
PPP4R1-219ENST00000581250 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
PPP4R1-219ENST00000581250 UPF1Q92900 1129 aaKnown RBP eCLIP16.69■□□□□ 0.26
PPP4R1-219ENST00000581250 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
PPP4R1-219ENST00000581250 TMF1P82094 1093 aa16.68■□□□□ 0.26
PPP4R1-219ENST00000581250 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
PPP4R1-219ENST00000581250 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
PPP4R1-219ENST00000581250 NME9Q86XW9 330 aa16.67■□□□□ 0.26
PPP4R1-219ENST00000581250 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
PPP4R1-219ENST00000581250 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 NFAT5O94916 1531 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 MYOM1P52179 1685 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
PPP4R1-219ENST00000581250 RGPD5Q99666 1765 aa16.65■□□□□ 0.26
PPP4R1-219ENST00000581250 COL18A1P39060 1754 aa16.64■□□□□ 0.25
PPP4R1-219ENST00000581250 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
PPP4R1-219ENST00000581250 COL5A2P05997 1499 aaPredicted RBP16.64■□□□□ 0.25
PPP4R1-219ENST00000581250 THSD7AQ9UPZ6 1657 aa16.64■□□□□ 0.25
PPP4R1-219ENST00000581250 EVA1CP58658 441 aa16.63■□□□□ 0.25
PPP4R1-219ENST00000581250 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
PPP4R1-219ENST00000581250 LTN1O94822 1766 aa16.63■□□□□ 0.25
PPP4R1-219ENST00000581250 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
PPP4R1-219ENST00000581250 SPATA31A1Q5TZJ5 1347 aa16.62■□□□□ 0.25
PPP4R1-219ENST00000581250 AATKQ6ZMQ8 1374 aa16.62■□□□□ 0.25
PPP4R1-219ENST00000581250 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
PPP4R1-219ENST00000581250 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
PPP4R1-219ENST00000581250 OVOS2A0A0J9YW53 1432 aa16.61■□□□□ 0.25
PPP4R1-219ENST00000581250 OVOS2Q6IE36 1432 aa16.61■□□□□ 0.25
PPP4R1-219ENST00000581250 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
PPP4R1-219ENST00000581250 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms