RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 SSH2Q76I76 1423 aa31.62■■■□□ 2.65
RARA-AS1-201ENST00000581080 NRKQ7Z2Y5 1582 aa31.62■■■□□ 2.65
RARA-AS1-201ENST00000581080 KIF20BQ96Q89 1820 aa31.62■■■□□ 2.65
RARA-AS1-201ENST00000581080 ORAI2Q96SN7 254 aa31.61■■■□□ 2.65
RARA-AS1-201ENST00000581080 TTC21BQ7Z4L5 1316 aa31.61■■■□□ 2.65
RARA-AS1-201ENST00000581080 ANKRD26Q9UPS8 1709 aa31.58■■■□□ 2.65
RARA-AS1-201ENST00000581080 NME9Q86XW9 330 aa31.58■■■□□ 2.65
RARA-AS1-201ENST00000581080 TNNT2P45379 298 aaPredicted RBP31.56■■■□□ 2.64
RARA-AS1-201ENST00000581080 TTC21AQ8NDW8 1320 aa31.55■■■□□ 2.64
RARA-AS1-201ENST00000581080 LTBP4Q8N2S1 1624 aa31.53■■■□□ 2.64
RARA-AS1-201ENST00000581080 PSME1Q06323 249 aa31.52■■■□□ 2.64
RARA-AS1-201ENST00000581080 YTHDC1Q96MU7 727 aaKnown RBP31.52■■■□□ 2.64
RARA-AS1-201ENST00000581080 FOXO3O43524 673 aa31.51■■■□□ 2.64
RARA-AS1-201ENST00000581080 PNISRQ8TF01 805 aaKnown RBP31.51■■■□□ 2.64
RARA-AS1-201ENST00000581080 KIF1AQ12756 1690 aa31.51■■■□□ 2.63
RARA-AS1-201ENST00000581080 COG3Q96JB2 828 aa31.51■■■□□ 2.63
RARA-AS1-201ENST00000581080 ZRANB1Q9UGI0 708 aa31.51■■■□□ 2.63
RARA-AS1-201ENST00000581080 FAM9BQ8IZU0 186 aa31.48■■■□□ 2.63
RARA-AS1-201ENST00000581080 SCAF1Q9H7N4 1312 aaKnown RBP31.48■■■□□ 2.63
RARA-AS1-201ENST00000581080 SLAIN2Q9P270 581 aa31.47■■■□□ 2.63
RARA-AS1-201ENST00000581080 MTHFSP49914 203 aa31.45■■■□□ 2.62
RARA-AS1-201ENST00000581080 OVOS2A0A0J9YW53 1432 aa31.45■■■□□ 2.62
RARA-AS1-201ENST00000581080 OVOS2Q6IE36 1432 aa31.45■■■□□ 2.62
RARA-AS1-201ENST00000581080 PAK3O75914 559 aaPredicted RBP31.44■■■□□ 2.62
RARA-AS1-201ENST00000581080 USP31Q70CQ4 1352 aa31.43■■■□□ 2.62
RARA-AS1-201ENST00000581080 PIK3C2AO00443 1686 aa31.41■■■□□ 2.62
RARA-AS1-201ENST00000581080 ABTB2Q8N961 1025 aa31.41■■■□□ 2.62
RARA-AS1-201ENST00000581080 BRINP3Q76B58 766 aa31.4■■■□□ 2.62
RARA-AS1-201ENST00000581080 KRT28Q7Z3Y7 464 aa31.4■■■□□ 2.62
RARA-AS1-201ENST00000581080 AATKQ6ZMQ8 1374 aa31.4■■■□□ 2.62
RARA-AS1-201ENST00000581080 XPCQ01831 940 aaPredicted RBP31.39■■■□□ 2.62
RARA-AS1-201ENST00000581080 NLRP6P59044 892 aa31.38■■■□□ 2.61
RARA-AS1-201ENST00000581080 NPHP3Q7Z494 1330 aa31.38■■■□□ 2.61
RARA-AS1-201ENST00000581080 FBLN1P23142 703 aa31.37■■■□□ 2.61
RARA-AS1-201ENST00000581080 POLKQ9UBT6 870 aa31.36■■■□□ 2.61
RARA-AS1-201ENST00000581080 CFAP53Q96M91 514 aa31.35■■■□□ 2.61
RARA-AS1-201ENST00000581080 TRPM3Q9HCF6 1732 aaPredicted RBP31.34■■■□□ 2.61
RARA-AS1-201ENST00000581080 MAP2P11137 1827 aaKnown RBP31.33■■■□□ 2.61
RARA-AS1-201ENST00000581080 DDX17Q92841 729 aaKnown RBP31.33■■■□□ 2.61
RARA-AS1-201ENST00000581080 USP54Q70EL1 1684 aa31.33■■■□□ 2.61
RARA-AS1-201ENST00000581080 NUTM2GQ5VZR2 741 aa31.33■■■□□ 2.61
RARA-AS1-201ENST00000581080 PNPLA6Q8IY17 1366 aa31.3■■■□□ 2.6
RARA-AS1-201ENST00000581080 SMG6Q86US8 1419 aaKnown RBP31.29■■■□□ 2.6
RARA-AS1-201ENST00000581080 MARF1Q9Y4F3 1742 aaKnown RBP31.29■■■□□ 2.6
RARA-AS1-201ENST00000581080 WDR43Q15061 677 aaKnown RBP eCLIP31.29■■■□□ 2.6
RARA-AS1-201ENST00000581080 SBNO1A3KN83 1393 aa31.29■■■□□ 2.6
RARA-AS1-201ENST00000581080 RRS1Q15050 365 aaKnown RBP31.28■■■□□ 2.6
RARA-AS1-201ENST00000581080 EMILIN1Q9Y6C2 1016 aa31.28■■■□□ 2.6
RARA-AS1-201ENST00000581080 PXDNQ92626 1479 aa31.28■■■□□ 2.6
RARA-AS1-201ENST00000581080 ADAMTS8Q9UP79 889 aa31.28■■■□□ 2.6
RARA-AS1-201ENST00000581080 PPM1GO15355 546 aaPredicted RBP31.27■■■□□ 2.6
RARA-AS1-201ENST00000581080 INSRP06213 1382 aa31.27■■■□□ 2.6
RARA-AS1-201ENST00000581080 SOX12O15370 315 aa31.25■■■□□ 2.59
RARA-AS1-201ENST00000581080 HNRNPUQ00839 825 aaKnown RBP eCLIP31.25■■■□□ 2.59
RARA-AS1-201ENST00000581080 LMOD2Q6P5Q4 547 aa31.24■■■□□ 2.59
RARA-AS1-201ENST00000581080 COL3A1P02461 1466 aaPredicted RBP31.24■■■□□ 2.59
RARA-AS1-201ENST00000581080 ALS2Q96Q42 1657 aa31.23■■■□□ 2.59
RARA-AS1-201ENST00000581080 SOS2Q07890 1332 aaPredicted RBP31.23■■■□□ 2.59
RARA-AS1-201ENST00000581080 CDK12Q9NYV4 1490 aaPredicted RBP31.23■■■□□ 2.59
RARA-AS1-201ENST00000581080 SHPRHQ149N8 1683 aa31.22■■■□□ 2.59
RARA-AS1-201ENST00000581080 TNS3Q68CZ2 1445 aa31.2■■■□□ 2.59
RARA-AS1-201ENST00000581080 SPATA31A3Q5VYP0 1347 aa31.2■■■□□ 2.59
RARA-AS1-201ENST00000581080 KCNH5Q8NCM2 988 aa31.2■■■□□ 2.58
RARA-AS1-201ENST00000581080 MAP3K19Q56UN5 1328 aa31.19■■■□□ 2.58
RARA-AS1-201ENST00000581080 DIAPH1O60610 1272 aaKnown RBP31.19■■■□□ 2.58
RARA-AS1-201ENST00000581080 NUDCQ9Y266 331 aa31.18■■■□□ 2.58
RARA-AS1-201ENST00000581080 USP19O94966 1318 aa31.18■■■□□ 2.58
RARA-AS1-201ENST00000581080 BLMP54132 1417 aaPredicted RBP31.17■■■□□ 2.58
RARA-AS1-201ENST00000581080 NHSL1Q5SYE7 1610 aa31.17■■■□□ 2.58
RARA-AS1-201ENST00000581080 SLIT3O75094 1523 aa31.16■■■□□ 2.58
RARA-AS1-201ENST00000581080 TOM1O60784 492 aa31.15■■■□□ 2.58
RARA-AS1-201ENST00000581080 GCP02774 474 aa31.15■■■□□ 2.58
RARA-AS1-201ENST00000581080 ARHGEF10O15013 1369 aa31.15■■■□□ 2.58
RARA-AS1-201ENST00000581080 ROBO1Q9Y6N7 1651 aa31.14■■■□□ 2.58
RARA-AS1-201ENST00000581080 NFAT5O94916 1531 aa31.14■■■□□ 2.58
RARA-AS1-201ENST00000581080 CENPBP07199 599 aaPredicted RBP31.14■■■□□ 2.58
RARA-AS1-201ENST00000581080 PEAK1Q9H792 1746 aa31.13■■■□□ 2.57
RARA-AS1-201ENST00000581080 KIF24Q5T7B8 1368 aa31.13■■■□□ 2.57
RARA-AS1-201ENST00000581080 FLT4P35916 1363 aa31.12■■■□□ 2.57
RARA-AS1-201ENST00000581080 IQSEC2Q5JU85 1478 aa31.11■■■□□ 2.57
RARA-AS1-201ENST00000581080 U2AF1L5P0DN76 240 aaPredicted RBP31.11■■■□□ 2.57
RARA-AS1-201ENST00000581080 IL13P35225 146 aa31.11■■■□□ 2.57
RARA-AS1-201ENST00000581080 AMPHP49418 695 aa31.11■■■□□ 2.57
RARA-AS1-201ENST00000581080 U2AF1Q01081 240 aaKnown RBP eCLIP31.11■■■□□ 2.57
RARA-AS1-201ENST00000581080 U2SURPO15042 1029 aaKnown RBP31.1■■■□□ 2.57
RARA-AS1-201ENST00000581080 HSP90AB2PQ58FF8 381 aa31.1■■■□□ 2.57
RARA-AS1-201ENST00000581080 MED1Q15648 1581 aaPredicted RBP31.09■■■□□ 2.57
RARA-AS1-201ENST00000581080 ZBED9Q6R2W3 1325 aa31.08■■■□□ 2.57
RARA-AS1-201ENST00000581080 PLEKHG5O94827 1062 aa31.07■■■□□ 2.56
RARA-AS1-201ENST00000581080 AHDC1Q5TGY3 1603 aaPredicted RBP31.06■■■□□ 2.56
RARA-AS1-201ENST00000581080 HOXC9P31274 260 aa31.06■■■□□ 2.56
RARA-AS1-201ENST00000581080 ARHGEF25Q86VW2 580 aa31.05■■■□□ 2.56
RARA-AS1-201ENST00000581080 CCDC146Q8IYE0 955 aa31.05■■■□□ 2.56
RARA-AS1-201ENST00000581080 RTL1A6NKG5 1358 aa31.05■■■□□ 2.56
RARA-AS1-201ENST00000581080 LTN1O94822 1766 aa31.05■■■□□ 2.56
RARA-AS1-201ENST00000581080 EIF4A2Q14240 407 aaKnown RBP31.05■■■□□ 2.56
RARA-AS1-201ENST00000581080 CERKQ8TCT0 537 aa31.05■■■□□ 2.56
RARA-AS1-201ENST00000581080 UBAP1LF5GYI3 381 aa31.03■■■□□ 2.56
RARA-AS1-201ENST00000581080 SENP3-EIF4A1A0A087X0R7 540 aa31.02■■■□□ 2.56
RARA-AS1-201ENST00000581080 CABLES1Q8TDN4 633 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms