RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 COL22A1Q8NFW1 1626 aaPredicted RBP10.97□□□□□ -0.65
RFFL-207ENST00000580569 PPLO60437 1756 aa10.96□□□□□ -0.65
RFFL-207ENST00000580569 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
RFFL-207ENST00000580569 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
RFFL-207ENST00000580569 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
RFFL-207ENST00000580569 ADGRL3Q9HAR2 1447 aa10.95□□□□□ -0.66
RFFL-207ENST00000580569 ANP32CO43423 234 aa10.95□□□□□ -0.66
RFFL-207ENST00000580569 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.95□□□□□ -0.66
RFFL-207ENST00000580569 GSE1Q14687 1217 aa10.94□□□□□ -0.66
RFFL-207ENST00000580569 FNBP4Q8N3X1 1017 aaPredicted RBP10.94□□□□□ -0.66
RFFL-207ENST00000580569 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
RFFL-207ENST00000580569 LRP5O75197 1615 aa10.94□□□□□ -0.66
RFFL-207ENST00000580569 ATRNO75882 1429 aa10.93□□□□□ -0.66
RFFL-207ENST00000580569 SOS2Q07890 1332 aaPredicted RBP10.92□□□□□ -0.66
RFFL-207ENST00000580569 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
RFFL-207ENST00000580569 ZNF326Q5BKZ1 582 aaKnown RBP10.92□□□□□ -0.66
RFFL-207ENST00000580569 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
RFFL-207ENST00000580569 USP21Q9UK80 565 aa10.92□□□□□ -0.66
RFFL-207ENST00000580569 BRWD3Q6RI45 1802 aa10.91□□□□□ -0.66
RFFL-207ENST00000580569 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
RFFL-207ENST00000580569 STAC3Q96MF2 364 aa10.91□□□□□ -0.66
RFFL-207ENST00000580569 MYOM2P54296 1465 aa10.91□□□□□ -0.66
RFFL-207ENST00000580569 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
RFFL-207ENST00000580569 ROCK2O75116 1388 aaKnown RBP10.9□□□□□ -0.66
RFFL-207ENST00000580569 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
RFFL-207ENST00000580569 ADAMTS2O95450 1211 aa10.9□□□□□ -0.66
RFFL-207ENST00000580569 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.66
RFFL-207ENST00000580569 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
RFFL-207ENST00000580569 METP08581 1390 aa10.9□□□□□ -0.67
RFFL-207ENST00000580569 ST20-MTHFSA0A0A6YYL1 179 aa10.89□□□□□ -0.67
RFFL-207ENST00000580569 BCL9LQ86UU0 1499 aa10.88□□□□□ -0.67
RFFL-207ENST00000580569 PRKRIP1Q9H875 184 aaPredicted RBP10.88□□□□□ -0.67
RFFL-207ENST00000580569 STK25O00506 426 aa10.87□□□□□ -0.67
RFFL-207ENST00000580569 NUBP1P53384 320 aa10.87□□□□□ -0.67
RFFL-207ENST00000580569 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
RFFL-207ENST00000580569 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
RFFL-207ENST00000580569 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
RFFL-207ENST00000580569 TESK2Q96S53 571 aa10.86□□□□□ -0.67
RFFL-207ENST00000580569 MYOM1P52179 1685 aa10.85□□□□□ -0.67
RFFL-207ENST00000580569 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
RFFL-207ENST00000580569 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
RFFL-207ENST00000580569 GJD4Q96KN9 370 aaPredicted RBP10.85□□□□□ -0.67
RFFL-207ENST00000580569 ARXQ96QS3 562 aa10.85□□□□□ -0.67
RFFL-207ENST00000580569 GLI3P10071 1580 aa10.85□□□□□ -0.67
RFFL-207ENST00000580569 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
RFFL-207ENST00000580569 PXDNQ92626 1479 aa10.83□□□□□ -0.68
RFFL-207ENST00000580569 ORAI2Q96SN7 254 aa10.83□□□□□ -0.68
RFFL-207ENST00000580569 NWD2Q9ULI1 1742 aa10.83□□□□□ -0.68
RFFL-207ENST00000580569 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
RFFL-207ENST00000580569 SLIT2O94813 1529 aa10.82□□□□□ -0.68
RFFL-207ENST00000580569 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
RFFL-207ENST00000580569 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
RFFL-207ENST00000580569 ROBO2Q9HCK4 1378 aa10.8□□□□□ -0.68
RFFL-207ENST00000580569 ADGRB1O14514 1584 aa10.8□□□□□ -0.68
RFFL-207ENST00000580569 ADGRF5Q8IZF2 1346 aa10.8□□□□□ -0.68
RFFL-207ENST00000580569 USP32Q8NFA0 1604 aa10.8□□□□□ -0.68
RFFL-207ENST00000580569 ARHGEF28Q8N1W1 1705 aaKnown RBP10.79□□□□□ -0.68
RFFL-207ENST00000580569 PIK3C2GO75747 1445 aa10.79□□□□□ -0.68
RFFL-207ENST00000580569 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
RFFL-207ENST00000580569 UNC5CLQ8IV45 518 aa10.79□□□□□ -0.68
RFFL-207ENST00000580569 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
RFFL-207ENST00000580569 QRICH2Q9H0J4 1663 aa10.79□□□□□ -0.68
RFFL-207ENST00000580569 DEFB132Q7Z7B7 95 aa10.78□□□□□ -0.68
RFFL-207ENST00000580569 KIF1AQ12756 1690 aa10.78□□□□□ -0.68
RFFL-207ENST00000580569 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.68
RFFL-207ENST00000580569 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.69
RFFL-207ENST00000580569 RGPD1P0DJD0 1748 aa10.77□□□□□ -0.69
RFFL-207ENST00000580569 RPGRIP1LQ68CZ1 1315 aa10.77□□□□□ -0.69
RFFL-207ENST00000580569 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
RFFL-207ENST00000580569 ABCA3Q99758 1704 aa10.76□□□□□ -0.69
RFFL-207ENST00000580569 SF3B2Q13435 895 aaKnown RBP10.76□□□□□ -0.69
RFFL-207ENST00000580569 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
RFFL-207ENST00000580569 STK24Q9Y6E0 443 aa10.76□□□□□ -0.69
RFFL-207ENST00000580569 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
RFFL-207ENST00000580569 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
RFFL-207ENST00000580569 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
RFFL-207ENST00000580569 CFAP70Q5T0N1 1121 aa10.75□□□□□ -0.69
RFFL-207ENST00000580569 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
RFFL-207ENST00000580569 SBNO2Q9Y2G9 1366 aa10.75□□□□□ -0.69
RFFL-207ENST00000580569 KNDC1Q76NI1 1749 aa10.75□□□□□ -0.69
RFFL-207ENST00000580569 FOXO3O43524 673 aa10.74□□□□□ -0.69
RFFL-207ENST00000580569 TMF1P82094 1093 aa10.74□□□□□ -0.69
RFFL-207ENST00000580569 ESCO1Q5FWF5 840 aa10.74□□□□□ -0.69
RFFL-207ENST00000580569 C14orf93Q9H972 538 aaKnown RBP10.74□□□□□ -0.69
RFFL-207ENST00000580569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
RFFL-207ENST00000580569 VPS72Q15906 364 aa10.73□□□□□ -0.69
RFFL-207ENST00000580569 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
RFFL-207ENST00000580569 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
RFFL-207ENST00000580569 POLR3GLQ9BT43 218 aa10.73□□□□□ -0.69
RFFL-207ENST00000580569 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
RFFL-207ENST00000580569 RYDENQ9NUL5 291 aaKnown RBP10.73□□□□□ -0.69
RFFL-207ENST00000580569 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
RFFL-207ENST00000580569 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
RFFL-207ENST00000580569 TECPR2O15040 1411 aa10.73□□□□□ -0.69
RFFL-207ENST00000580569 NRAPQ86VF7 1730 aa10.72□□□□□ -0.69
RFFL-207ENST00000580569 TNS1Q9HBL0 1735 aaKnown RBP10.72□□□□□ -0.69
RFFL-207ENST00000580569 RALBP1Q15311 655 aa10.72□□□□□ -0.69
RFFL-207ENST00000580569 BRD4O60885 1362 aaPredicted RBP10.72□□□□□ -0.69
RFFL-207ENST00000580569 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
RFFL-207ENST00000580569 BAG6P46379 1132 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms