RNA–Protein interactions for RNA: ENST00000580497.1

PMP22-207, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-207ENST00000580497 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
PMP22-207ENST00000580497 KNSTRNQ9Y448 316 aa11.42□□□□□ -0.58
PMP22-207ENST00000580497 TTC21BQ7Z4L5 1316 aa11.41□□□□□ -0.58
PMP22-207ENST00000580497 CRYBG1Q9Y4K1 1723 aa11.41□□□□□ -0.58
PMP22-207ENST00000580497 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
PMP22-207ENST00000580497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.41□□□□□ -0.58
PMP22-207ENST00000580497 MIER1Q8N108 512 aa11.41□□□□□ -0.58
PMP22-207ENST00000580497 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
PMP22-207ENST00000580497 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
PMP22-207ENST00000580497 PHLPP1O60346 1717 aa11.4□□□□□ -0.58
PMP22-207ENST00000580497 MAP2P11137 1827 aaKnown RBP11.4□□□□□ -0.58
PMP22-207ENST00000580497 FYB1O15117 783 aa11.4□□□□□ -0.58
PMP22-207ENST00000580497 NME9Q86XW9 330 aa11.4□□□□□ -0.58
PMP22-207ENST00000580497 PARD3Q8TEW0 1356 aa11.4□□□□□ -0.59
PMP22-207ENST00000580497 AHDC1Q5TGY3 1603 aaPredicted RBP11.39□□□□□ -0.59
PMP22-207ENST00000580497 PSME1Q06323 249 aa11.39□□□□□ -0.59
PMP22-207ENST00000580497 KRT28Q7Z3Y7 464 aa11.39□□□□□ -0.59
PMP22-207ENST00000580497 GGNBP2Q9H3C7 697 aa11.39□□□□□ -0.59
PMP22-207ENST00000580497 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
PMP22-207ENST00000580497 CGNL1Q0VF96 1302 aa11.38□□□□□ -0.59
PMP22-207ENST00000580497 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
PMP22-207ENST00000580497 ANP32CO43423 234 aa11.38□□□□□ -0.59
PMP22-207ENST00000580497 NSD2O96028 1365 aa11.38□□□□□ -0.59
PMP22-207ENST00000580497 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
PMP22-207ENST00000580497 PHRF1Q9P1Y6 1649 aaKnown RBP11.38□□□□□ -0.59
PMP22-207ENST00000580497 NPHP3Q7Z494 1330 aa11.37□□□□□ -0.59
PMP22-207ENST00000580497 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
PMP22-207ENST00000580497 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
PMP22-207ENST00000580497 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
PMP22-207ENST00000580497 LTN1O94822 1766 aa11.37□□□□□ -0.59
PMP22-207ENST00000580497 UBAP1LF5GYI3 381 aa11.37□□□□□ -0.59
PMP22-207ENST00000580497 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
PMP22-207ENST00000580497 TOM1O60784 492 aa11.36□□□□□ -0.59
PMP22-207ENST00000580497 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
PMP22-207ENST00000580497 PIP4K2BP78356 416 aa11.36□□□□□ -0.59
PMP22-207ENST00000580497 SBNO1A3KN83 1393 aa11.36□□□□□ -0.59
PMP22-207ENST00000580497 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
PMP22-207ENST00000580497 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
PMP22-207ENST00000580497 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
PMP22-207ENST00000580497 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
PMP22-207ENST00000580497 NUTM2GQ5VZR2 741 aa11.35□□□□□ -0.59
PMP22-207ENST00000580497 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
PMP22-207ENST00000580497 FBLN1P23142 703 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 RALBP1Q15311 655 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 MORC1Q86VD1 984 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
PMP22-207ENST00000580497 SLIT3O75094 1523 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
PMP22-207ENST00000580497 PPP2R1AP30153 589 aa11.33□□□□□ -0.6
PMP22-207ENST00000580497 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
PMP22-207ENST00000580497 NFAT5O94916 1531 aa11.33□□□□□ -0.6
PMP22-207ENST00000580497 RGPD5Q99666 1765 aa11.33□□□□□ -0.6
PMP22-207ENST00000580497 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
PMP22-207ENST00000580497 NLRP6P59044 892 aa11.32□□□□□ -0.6
PMP22-207ENST00000580497 COG3Q96JB2 828 aa11.32□□□□□ -0.6
PMP22-207ENST00000580497 SHPRHQ149N8 1683 aa11.32□□□□□ -0.6
PMP22-207ENST00000580497 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
PMP22-207ENST00000580497 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
PMP22-207ENST00000580497 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
PMP22-207ENST00000580497 COL18A1P39060 1754 aa11.3□□□□□ -0.6
PMP22-207ENST00000580497 USP19O94966 1318 aa11.3□□□□□ -0.6
PMP22-207ENST00000580497 SMG6Q86US8 1419 aaKnown RBP11.29□□□□□ -0.6
PMP22-207ENST00000580497 SOX12O15370 315 aa11.29□□□□□ -0.6
PMP22-207ENST00000580497 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
PMP22-207ENST00000580497 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
PMP22-207ENST00000580497 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
PMP22-207ENST00000580497 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
PMP22-207ENST00000580497 CCER2I3L3R5 266 aa11.28□□□□□ -0.6
PMP22-207ENST00000580497 CABLES1Q8TDN4 633 aa11.28□□□□□ -0.6
PMP22-207ENST00000580497 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
PMP22-207ENST00000580497 PNPLA6Q8IY17 1366 aa11.28□□□□□ -0.6
PMP22-207ENST00000580497 MTHFSP49914 203 aa11.27□□□□□ -0.61
PMP22-207ENST00000580497 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.61
PMP22-207ENST00000580497 POLKQ9UBT6 870 aa11.27□□□□□ -0.61
PMP22-207ENST00000580497 EMILIN1Q9Y6C2 1016 aa11.27□□□□□ -0.61
PMP22-207ENST00000580497 LRRC59Q96AG4 307 aaKnown RBP11.26□□□□□ -0.61
PMP22-207ENST00000580497 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
PMP22-207ENST00000580497 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
PMP22-207ENST00000580497 GCP02774 474 aa11.25□□□□□ -0.61
PMP22-207ENST00000580497 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
PMP22-207ENST00000580497 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
PMP22-207ENST00000580497 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
PMP22-207ENST00000580497 KCNH5Q8NCM2 988 aa11.24□□□□□ -0.61
PMP22-207ENST00000580497 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
PMP22-207ENST00000580497 HSPA1LP34931 641 aa11.23□□□□□ -0.61
PMP22-207ENST00000580497 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
PMP22-207ENST00000580497 PLCH1Q4KWH8 1693 aa11.23□□□□□ -0.61
PMP22-207ENST00000580497 INSRP06213 1382 aa11.22□□□□□ -0.61
PMP22-207ENST00000580497 ZC3H6P61129 1189 aaKnown RBP11.22□□□□□ -0.61
PMP22-207ENST00000580497 COL14A1Q05707 1796 aaKnown RBP11.22□□□□□ -0.61
PMP22-207ENST00000580497 CPDO75976 1380 aa11.21□□□□□ -0.61
PMP22-207ENST00000580497 FLT4P35916 1363 aa11.21□□□□□ -0.61
PMP22-207ENST00000580497 KIAA0232Q92628 1395 aa11.21□□□□□ -0.61
PMP22-207ENST00000580497 HOXC9P31274 260 aa11.21□□□□□ -0.61
PMP22-207ENST00000580497 HSP90AB2PQ58FF8 381 aa11.21□□□□□ -0.61
PMP22-207ENST00000580497 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.61
PMP22-207ENST00000580497 NRAPQ86VF7 1730 aa11.21□□□□□ -0.62
PMP22-207ENST00000580497 ABCC6O95255 1503 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms