RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 FAM160A2Q8N612 972 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-216ENST00000580283 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
PPP4R1-216ENST00000580283 BRPF1P55201 1214 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-216ENST00000580283 MYSM1Q5VVJ2 828 aa11.63□□□□□ -0.55
PPP4R1-216ENST00000580283 SYMPKQ92797 1274 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-216ENST00000580283 BIVM-ERCC5R4GMW8 1640 aa11.63□□□□□ -0.55
PPP4R1-216ENST00000580283 RUSC2Q8N2Y8 1516 aa11.62□□□□□ -0.55
PPP4R1-216ENST00000580283 PPEF1O14829 653 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-216ENST00000580283 SPTLC1O15269 473 aa11.62□□□□□ -0.55
PPP4R1-216ENST00000580283 ANKLE1Q8NAG6 615 aa11.62□□□□□ -0.55
PPP4R1-216ENST00000580283 TOP2BQ02880 1626 aa11.61□□□□□ -0.55
PPP4R1-216ENST00000580283 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
PPP4R1-216ENST00000580283 PRDM9Q9NQV7 894 aa11.61□□□□□ -0.55
PPP4R1-216ENST00000580283 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
PPP4R1-216ENST00000580283 HECW2Q9P2P5 1572 aa11.61□□□□□ -0.55
PPP4R1-216ENST00000580283 MTMR2Q13614 643 aa11.6□□□□□ -0.55
PPP4R1-216ENST00000580283 CSPP1Q1MSJ5 1256 aa11.6□□□□□ -0.55
PPP4R1-216ENST00000580283 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
PPP4R1-216ENST00000580283 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
PPP4R1-216ENST00000580283 COL17A1Q9UMD9 1497 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-216ENST00000580283 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
PPP4R1-216ENST00000580283 CLK2P49760 499 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-216ENST00000580283 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
PPP4R1-216ENST00000580283 PCDHB15Q9Y5E8 787 aa11.58□□□□□ -0.56
PPP4R1-216ENST00000580283 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
PPP4R1-216ENST00000580283 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
PPP4R1-216ENST00000580283 FCF1Q9Y324 198 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-216ENST00000580283 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
PPP4R1-216ENST00000580283 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
PPP4R1-216ENST00000580283 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 MMP16P51512 607 aa11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-216ENST00000580283 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
PPP4R1-216ENST00000580283 JUNDP17535 347 aa11.54□□□□□ -0.56
PPP4R1-216ENST00000580283 HRCP23327 699 aa11.54□□□□□ -0.56
PPP4R1-216ENST00000580283 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
PPP4R1-216ENST00000580283 SLC19A1P41440 591 aa11.53□□□□□ -0.56
PPP4R1-216ENST00000580283 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.57
PPP4R1-216ENST00000580283 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
PPP4R1-216ENST00000580283 GLI2P10070 1586 aa11.52□□□□□ -0.57
PPP4R1-216ENST00000580283 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
PPP4R1-216ENST00000580283 CUL7Q14999 1698 aa11.5□□□□□ -0.57
PPP4R1-216ENST00000580283 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-216ENST00000580283 QPCTQ16769 361 aa11.5□□□□□ -0.57
PPP4R1-216ENST00000580283 LILRB3O75022 631 aa11.49□□□□□ -0.57
PPP4R1-216ENST00000580283 PLA2G2CQ5R387 149 aa11.49□□□□□ -0.57
PPP4R1-216ENST00000580283 TSC1Q92574 1164 aa11.49□□□□□ -0.57
PPP4R1-216ENST00000580283 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
PPP4R1-216ENST00000580283 DESI1Q6ICB0 168 aa11.48□□□□□ -0.57
PPP4R1-216ENST00000580283 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-216ENST00000580283 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
PPP4R1-216ENST00000580283 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
PPP4R1-216ENST00000580283 ABCC2Q92887 1545 aa11.47□□□□□ -0.57
PPP4R1-216ENST00000580283 PTPRGP23470 1445 aa11.47□□□□□ -0.57
PPP4R1-216ENST00000580283 LIAT1Q6ZQX7 453 aa11.47□□□□□ -0.57
PPP4R1-216ENST00000580283 PROCA1Q8NCQ7 364 aaPredicted RBP11.47□□□□□ -0.57
PPP4R1-216ENST00000580283 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
PPP4R1-216ENST00000580283 CFAP99D6REC4 459 aa11.46□□□□□ -0.57
PPP4R1-216ENST00000580283 RPIAP49247 311 aa11.46□□□□□ -0.57
PPP4R1-216ENST00000580283 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
PPP4R1-216ENST00000580283 PTPRNQ16849 979 aa11.45□□□□□ -0.58
PPP4R1-216ENST00000580283 SPRYD7Q5W111 196 aa11.45□□□□□ -0.58
PPP4R1-216ENST00000580283 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-216ENST00000580283 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-216ENST00000580283 PLB1Q6P1J6 1458 aa11.44□□□□□ -0.58
PPP4R1-216ENST00000580283 IGF1RP08069 1367 aa11.44□□□□□ -0.58
PPP4R1-216ENST00000580283 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-216ENST00000580283 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-216ENST00000580283 CCNYL3P0C7X3 344 aa11.44□□□□□ -0.58
PPP4R1-216ENST00000580283 RTL5Q5HYW3 569 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-216ENST00000580283 ZNF598Q86UK7 904 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-216ENST00000580283 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
PPP4R1-216ENST00000580283 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-216ENST00000580283 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
PPP4R1-216ENST00000580283 IRX2Q9BZI1 471 aaPredicted RBP11.42□□□□□ -0.58
PPP4R1-216ENST00000580283 UHRF1BP1LA0JNW5 1464 aa11.41□□□□□ -0.58
PPP4R1-216ENST00000580283 LYPD8Q6UX82 237 aa11.41□□□□□ -0.58
PPP4R1-216ENST00000580283 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
PPP4R1-216ENST00000580283 CTHP32929 405 aa11.39□□□□□ -0.59
PPP4R1-216ENST00000580283 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
PPP4R1-216ENST00000580283 ZCCHC11Q5TAX3 1644 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-216ENST00000580283 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
PPP4R1-216ENST00000580283 TRIM32Q13049 653 aa11.38□□□□□ -0.59
PPP4R1-216ENST00000580283 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
PPP4R1-216ENST00000580283 KDM5BQ9UGL1 1544 aa11.38□□□□□ -0.59
PPP4R1-216ENST00000580283 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
PPP4R1-216ENST00000580283 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
PPP4R1-216ENST00000580283 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-216ENST00000580283 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-216ENST00000580283 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
PPP4R1-216ENST00000580283 KIF21BO75037 1637 aa11.35□□□□□ -0.59
PPP4R1-216ENST00000580283 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
PPP4R1-216ENST00000580283 GFRA3O60609 400 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms