RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 USP21Q9UK80 565 aa15.43■□□□□ 0.06
NDEL1-208ENST00000580237 POLR3AO14802 1390 aaPredicted RBP15.43■□□□□ 0.06
NDEL1-208ENST00000580237 ACEP12821 1306 aa15.43■□□□□ 0.06
NDEL1-208ENST00000580237 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
NDEL1-208ENST00000580237 RXRBP28702 533 aa15.42■□□□□ 0.06
NDEL1-208ENST00000580237 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
NDEL1-208ENST00000580237 COL14A1Q05707 1796 aaKnown RBP15.4■□□□□ 0.06
NDEL1-208ENST00000580237 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
NDEL1-208ENST00000580237 QTRT2Q9H974 415 aaKnown RBP15.39■□□□□ 0.05
NDEL1-208ENST00000580237 TRPC5Q9UL62 973 aaPredicted RBP15.39■□□□□ 0.05
NDEL1-208ENST00000580237 MON2Q7Z3U7 1717 aa15.39■□□□□ 0.05
NDEL1-208ENST00000580237 CDK12Q9NYV4 1490 aaPredicted RBP15.39■□□□□ 0.05
NDEL1-208ENST00000580237 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 NRKQ7Z2Y5 1582 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 ATRNO75882 1429 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 USP6P35125 1406 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 RBM6P78332 1123 aaKnown RBP15.37■□□□□ 0.05
NDEL1-208ENST00000580237 FNBP4Q8N3X1 1017 aaPredicted RBP15.37■□□□□ 0.05
NDEL1-208ENST00000580237 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 SLIT2O94813 1529 aa15.37■□□□□ 0.05
NDEL1-208ENST00000580237 USP47Q96K76 1375 aa15.36■□□□□ 0.05
NDEL1-208ENST00000580237 RGS12O14924 1447 aa15.36■□□□□ 0.05
NDEL1-208ENST00000580237 BCL9LQ86UU0 1499 aa15.36■□□□□ 0.05
NDEL1-208ENST00000580237 NUTM2GQ5VZR2 741 aa15.36■□□□□ 0.05
NDEL1-208ENST00000580237 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
NDEL1-208ENST00000580237 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
NDEL1-208ENST00000580237 ABTB2Q8N961 1025 aa15.35■□□□□ 0.05
NDEL1-208ENST00000580237 PRDM11Q9NQV5 511 aa15.34■□□□□ 0.05
NDEL1-208ENST00000580237 ST20-MTHFSA0A0A6YYL1 179 aa15.33■□□□□ 0.04
NDEL1-208ENST00000580237 UNC5CLQ8IV45 518 aa15.33■□□□□ 0.04
NDEL1-208ENST00000580237 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
NDEL1-208ENST00000580237 GLI3P10071 1580 aa15.32■□□□□ 0.04
NDEL1-208ENST00000580237 TMC1Q8TDI8 760 aa15.32■□□□□ 0.04
NDEL1-208ENST00000580237 KTN1Q86UP2 1357 aaKnown RBP15.32■□□□□ 0.04
NDEL1-208ENST00000580237 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
NDEL1-208ENST00000580237 KIAA0232Q92628 1395 aa15.31■□□□□ 0.04
NDEL1-208ENST00000580237 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
NDEL1-208ENST00000580237 USP19O94966 1318 aa15.29■□□□□ 0.04
NDEL1-208ENST00000580237 FAM83GA6ND36 823 aa15.29■□□□□ 0.04
NDEL1-208ENST00000580237 HDGFL2Q7Z4V5 671 aaPredicted RBP15.29■□□□□ 0.04
NDEL1-208ENST00000580237 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
NDEL1-208ENST00000580237 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
NDEL1-208ENST00000580237 BTG4Q9NY30 223 aa15.29■□□□□ 0.04
NDEL1-208ENST00000580237 BRWD3Q6RI45 1802 aa15.29■□□□□ 0.04
NDEL1-208ENST00000580237 SLIT3O75094 1523 aa15.28■□□□□ 0.04
NDEL1-208ENST00000580237 CPSF1Q10570 1443 aaKnown RBP15.28■□□□□ 0.04
NDEL1-208ENST00000580237 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
NDEL1-208ENST00000580237 NLRP6P59044 892 aa15.28■□□□□ 0.04
NDEL1-208ENST00000580237 ZC3H6P61129 1189 aaKnown RBP15.28■□□□□ 0.04
NDEL1-208ENST00000580237 TMF1P82094 1093 aa15.28■□□□□ 0.04
NDEL1-208ENST00000580237 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 A0A0G2JS52 829 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 MYT1Q01538 1121 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 VPS72Q15906 364 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 TESK2Q96S53 571 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.04
NDEL1-208ENST00000580237 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
NDEL1-208ENST00000580237 USP54Q70EL1 1684 aa15.26■□□□□ 0.03
NDEL1-208ENST00000580237 LMO7Q8WWI1 1683 aa15.26■□□□□ 0.03
NDEL1-208ENST00000580237 TTC21BQ7Z4L5 1316 aa15.26■□□□□ 0.03
NDEL1-208ENST00000580237 CD163L1Q9NR16 1453 aa15.26■□□□□ 0.03
NDEL1-208ENST00000580237 A0A1W2PP64 1363 aa15.25■□□□□ 0.03
NDEL1-208ENST00000580237 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
NDEL1-208ENST00000580237 LTN1O94822 1766 aa15.25■□□□□ 0.03
NDEL1-208ENST00000580237 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
NDEL1-208ENST00000580237 CPDO75976 1380 aa15.24■□□□□ 0.03
NDEL1-208ENST00000580237 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
NDEL1-208ENST00000580237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
NDEL1-208ENST00000580237 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
NDEL1-208ENST00000580237 SLC12A5Q9H2X9 1139 aa15.24■□□□□ 0.03
NDEL1-208ENST00000580237 MYOM1P52179 1685 aa15.24■□□□□ 0.03
NDEL1-208ENST00000580237 RGPD5Q99666 1765 aa15.24■□□□□ 0.03
NDEL1-208ENST00000580237 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
NDEL1-208ENST00000580237 SOX12O15370 315 aa15.23■□□□□ 0.03
NDEL1-208ENST00000580237 GCP02774 474 aa15.23■□□□□ 0.03
NDEL1-208ENST00000580237 EVA1CP58658 441 aa15.21■□□□□ 0.03
NDEL1-208ENST00000580237 KCNH5Q8NCM2 988 aa15.21■□□□□ 0.03
NDEL1-208ENST00000580237 CAMTA1Q9Y6Y1 1673 aa15.21■□□□□ 0.03
NDEL1-208ENST00000580237 THSD7AQ9UPZ6 1657 aa15.2■□□□□ 0.02
NDEL1-208ENST00000580237 NME9Q86XW9 330 aa15.2■□□□□ 0.02
NDEL1-208ENST00000580237 NFAT5O94916 1531 aa15.2■□□□□ 0.02
NDEL1-208ENST00000580237 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
NDEL1-208ENST00000580237 SPATA31A5Q5VU36 1347 aa15.19■□□□□ 0.02
NDEL1-208ENST00000580237 SPATA31A7Q8IWB4 1347 aa15.19■□□□□ 0.02
NDEL1-208ENST00000580237 COL18A1P39060 1754 aa15.19■□□□□ 0.02
NDEL1-208ENST00000580237 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
NDEL1-208ENST00000580237 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
NDEL1-208ENST00000580237 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
NDEL1-208ENST00000580237 UPF1Q92900 1129 aaKnown RBP eCLIP15.19■□□□□ 0.02
NDEL1-208ENST00000580237 WNK3Q9BYP7 1800 aa15.19■□□□□ 0.02
NDEL1-208ENST00000580237 COL5A2P05997 1499 aaPredicted RBP15.19■□□□□ 0.02
NDEL1-208ENST00000580237 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
NDEL1-208ENST00000580237 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
NDEL1-208ENST00000580237 ABCC6O95255 1503 aa15.17■□□□□ 0.02
NDEL1-208ENST00000580237 AATKQ6ZMQ8 1374 aa15.17■□□□□ 0.02
NDEL1-208ENST00000580237 USP31Q70CQ4 1352 aa15.17■□□□□ 0.02
NDEL1-208ENST00000580237 OVOS2A0A0J9YW53 1432 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms