RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 DDX10Q13206 875 aaKnown RBP13.68□□□□□ -0.22
SNX11-206ENST00000580219 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
SNX11-206ENST00000580219 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
SNX11-206ENST00000580219 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
SNX11-206ENST00000580219 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 A0A0G2JS52 829 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 PRELPP51888 382 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 MYT1Q01538 1121 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
SNX11-206ENST00000580219 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 USP47Q96K76 1375 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
SNX11-206ENST00000580219 TRPM1Q7Z4N2 1603 aa13.66□□□□□ -0.22
SNX11-206ENST00000580219 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
SNX11-206ENST00000580219 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
SNX11-206ENST00000580219 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
SNX11-206ENST00000580219 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
SNX11-206ENST00000580219 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
SNX11-206ENST00000580219 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
SNX11-206ENST00000580219 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
SNX11-206ENST00000580219 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
SNX11-206ENST00000580219 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
SNX11-206ENST00000580219 NWD2Q9ULI1 1742 aa13.64□□□□□ -0.23
SNX11-206ENST00000580219 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
SNX11-206ENST00000580219 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
SNX11-206ENST00000580219 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
SNX11-206ENST00000580219 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
SNX11-206ENST00000580219 USP32Q8NFA0 1604 aa13.63□□□□□ -0.23
SNX11-206ENST00000580219 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
SNX11-206ENST00000580219 PCNTO95613 3336 aa13.62□□□□□ -0.23
SNX11-206ENST00000580219 HSPA6P17066 643 aa13.62□□□□□ -0.23
SNX11-206ENST00000580219 VPS72Q15906 364 aa13.62□□□□□ -0.23
SNX11-206ENST00000580219 COL13A1Q5TAT6 717 aaPredicted RBP13.62□□□□□ -0.23
SNX11-206ENST00000580219 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
SNX11-206ENST00000580219 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
SNX11-206ENST00000580219 CCER2I3L3R5 266 aa13.61□□□□□ -0.23
SNX11-206ENST00000580219 ANP32CO43423 234 aa13.61□□□□□ -0.23
SNX11-206ENST00000580219 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
SNX11-206ENST00000580219 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
SNX11-206ENST00000580219 CASZ1Q86V15 1759 aa13.6□□□□□ -0.23
SNX11-206ENST00000580219 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
SNX11-206ENST00000580219 PPLO60437 1756 aa13.6□□□□□ -0.23
SNX11-206ENST00000580219 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
SNX11-206ENST00000580219 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
SNX11-206ENST00000580219 KIF7Q2M1P5 1343 aa13.59□□□□□ -0.23
SNX11-206ENST00000580219 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
SNX11-206ENST00000580219 KIAA1210Q9ULL0 1709 aa13.58□□□□□ -0.24
SNX11-206ENST00000580219 TNS4Q8IZW8 715 aa13.57□□□□□ -0.24
SNX11-206ENST00000580219 DLC1Q96QB1 1528 aa13.57□□□□□ -0.24
SNX11-206ENST00000580219 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
SNX11-206ENST00000580219 PXDNQ92626 1479 aa13.56□□□□□ -0.24
SNX11-206ENST00000580219 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
SNX11-206ENST00000580219 TRIM37O94972 964 aa13.56□□□□□ -0.24
SNX11-206ENST00000580219 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
SNX11-206ENST00000580219 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
SNX11-206ENST00000580219 APBA3O96018 575 aa13.55□□□□□ -0.24
SNX11-206ENST00000580219 SYT17Q9BSW7 474 aa13.55□□□□□ -0.24
SNX11-206ENST00000580219 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
SNX11-206ENST00000580219 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
SNX11-206ENST00000580219 FHDC1Q9C0D6 1143 aaPredicted RBP13.54□□□□□ -0.24
SNX11-206ENST00000580219 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
SNX11-206ENST00000580219 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNX11-206ENST00000580219 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
SNX11-206ENST00000580219 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
SNX11-206ENST00000580219 THSD7AQ9UPZ6 1657 aa13.52□□□□□ -0.25
SNX11-206ENST00000580219 NPHP3Q7Z494 1330 aa13.51□□□□□ -0.25
SNX11-206ENST00000580219 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
SNX11-206ENST00000580219 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
SNX11-206ENST00000580219 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
SNX11-206ENST00000580219 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
SNX11-206ENST00000580219 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
SNX11-206ENST00000580219 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
SNX11-206ENST00000580219 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
SNX11-206ENST00000580219 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
SNX11-206ENST00000580219 PTGER2P43116 358 aa13.49□□□□□ -0.25
SNX11-206ENST00000580219 POTEHQ6S545 545 aa13.49□□□□□ -0.25
SNX11-206ENST00000580219 ABCA3Q99758 1704 aa13.49□□□□□ -0.25
SNX11-206ENST00000580219 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
SNX11-206ENST00000580219 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
SNX11-206ENST00000580219 GPR162Q16538 588 aa13.47□□□□□ -0.25
SNX11-206ENST00000580219 TESK2Q96S53 571 aa13.46□□□□□ -0.25
SNX11-206ENST00000580219 PDGFDQ9GZP0 370 aaPredicted RBP13.46□□□□□ -0.25
SNX11-206ENST00000580219 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
SNX11-206ENST00000580219 TMF1P82094 1093 aa13.45□□□□□ -0.26
SNX11-206ENST00000580219 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
SNX11-206ENST00000580219 FAM196AQ6ZSG2 479 aa13.44□□□□□ -0.26
SNX11-206ENST00000580219 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
SNX11-206ENST00000580219 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
SNX11-206ENST00000580219 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
SNX11-206ENST00000580219 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
SNX11-206ENST00000580219 METP08581 1390 aa13.43□□□□□ -0.26
SNX11-206ENST00000580219 FOXO3O43524 673 aa13.42□□□□□ -0.26
SNX11-206ENST00000580219 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
SNX11-206ENST00000580219 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
SNX11-206ENST00000580219 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
SNX11-206ENST00000580219 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
SNX11-206ENST00000580219 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms