RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
LINC00909-202ENST00000580048 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
LINC00909-202ENST00000580048 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00909-202ENST00000580048 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
LINC00909-202ENST00000580048 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
LINC00909-202ENST00000580048 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
LINC00909-202ENST00000580048 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 ATF7IPQ6VMQ6 1270 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 PDCL2Q8N4E4 241 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 ZGPATQ8N5A5 531 aaKnown RBP12.59□□□□□ -0.39
LINC00909-202ENST00000580048 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 ZBTB22O15209 634 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
LINC00909-202ENST00000580048 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
LINC00909-202ENST00000580048 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.39
LINC00909-202ENST00000580048 TTC12Q9H892 705 aaPredicted RBP12.58□□□□□ -0.39
LINC00909-202ENST00000580048 U2AF2P26368 475 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00909-202ENST00000580048 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00909-202ENST00000580048 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
LINC00909-202ENST00000580048 CLEC17AQ6ZS10 378 aa12.57□□□□□ -0.4
LINC00909-202ENST00000580048 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
LINC00909-202ENST00000580048 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
LINC00909-202ENST00000580048 TSPY26PQ9H489 355 aa12.56□□□□□ -0.4
LINC00909-202ENST00000580048 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
LINC00909-202ENST00000580048 RABEP1Q15276 862 aa12.56□□□□□ -0.4
LINC00909-202ENST00000580048 USP25Q9UHP3 1055 aa12.56□□□□□ -0.4
LINC00909-202ENST00000580048 AK9Q5TCS8 1911 aa12.55□□□□□ -0.4
LINC00909-202ENST00000580048 MTHFSP49914 203 aa12.55□□□□□ -0.4
LINC00909-202ENST00000580048 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
LINC00909-202ENST00000580048 PDIA4P13667 645 aaKnown RBP12.55□□□□□ -0.4
LINC00909-202ENST00000580048 CDC45O75419 566 aa12.54□□□□□ -0.4
LINC00909-202ENST00000580048 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
LINC00909-202ENST00000580048 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
LINC00909-202ENST00000580048 URB2Q14146 1524 aaKnown RBP12.54□□□□□ -0.4
LINC00909-202ENST00000580048 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
LINC00909-202ENST00000580048 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
LINC00909-202ENST00000580048 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
LINC00909-202ENST00000580048 PLA2R1Q13018 1463 aa12.54□□□□□ -0.4
LINC00909-202ENST00000580048 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
LINC00909-202ENST00000580048 PTPRGP23470 1445 aa12.53□□□□□ -0.4
LINC00909-202ENST00000580048 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
LINC00909-202ENST00000580048 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.4
LINC00909-202ENST00000580048 ST18O60284 1047 aa12.52□□□□□ -0.4
LINC00909-202ENST00000580048 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.4
LINC00909-202ENST00000580048 APBB1O00213 710 aa12.52□□□□□ -0.41
LINC00909-202ENST00000580048 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
LINC00909-202ENST00000580048 MBD3O95983 291 aa12.52□□□□□ -0.41
LINC00909-202ENST00000580048 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
LINC00909-202ENST00000580048 POLR3AO14802 1390 aaPredicted RBP12.51□□□□□ -0.41
LINC00909-202ENST00000580048 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
LINC00909-202ENST00000580048 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
LINC00909-202ENST00000580048 ZDHHC9Q9Y397 364 aa12.51□□□□□ -0.41
LINC00909-202ENST00000580048 ADCY5O95622 1261 aa12.5□□□□□ -0.41
LINC00909-202ENST00000580048 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
LINC00909-202ENST00000580048 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
LINC00909-202ENST00000580048 CCDC141Q6ZP82 1450 aa12.5□□□□□ -0.41
LINC00909-202ENST00000580048 KCNJ4P48050 445 aa12.49□□□□□ -0.41
LINC00909-202ENST00000580048 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
LINC00909-202ENST00000580048 ABCC10Q5T3U5 1492 aa12.49□□□□□ -0.41
LINC00909-202ENST00000580048 PHF23Q9BUL5 403 aaPredicted RBP12.49□□□□□ -0.41
LINC00909-202ENST00000580048 SLC12A5Q9H2X9 1139 aa12.49□□□□□ -0.41
LINC00909-202ENST00000580048 NUP160Q12769 1436 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 FBLN2P98095 1184 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 RAPGEF6Q8TEU7 1601 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 GCC1Q96CN9 775 aa12.48□□□□□ -0.41
LINC00909-202ENST00000580048 SYNMO15061 1565 aa12.47□□□□□ -0.41
LINC00909-202ENST00000580048 GTF2F1P35269 517 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 TAF3Q5VWG9 929 aa12.47□□□□□ -0.41
LINC00909-202ENST00000580048 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
LINC00909-202ENST00000580048 EIF2AK4Q9P2K8 1649 aaKnown RBP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 SCAF11Q99590 1463 aaKnown RBP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 CROCC2H7BZ55 1655 aa12.47□□□□□ -0.41
LINC00909-202ENST00000580048 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 IPO4Q8TEX9 1081 aaKnown RBP12.47□□□□□ -0.41
LINC00909-202ENST00000580048 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
LINC00909-202ENST00000580048 GRIN2AQ12879 1464 aa12.46□□□□□ -0.41
LINC00909-202ENST00000580048 PHF14O94880 888 aa12.46□□□□□ -0.41
LINC00909-202ENST00000580048 NSD3Q9BZ95 1437 aa12.46□□□□□ -0.42
LINC00909-202ENST00000580048 CT47B1P0C2W7 299 aaPredicted RBP12.46□□□□□ -0.42
LINC00909-202ENST00000580048 NEK4P51957 841 aa12.46□□□□□ -0.42
LINC00909-202ENST00000580048 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.42
LINC00909-202ENST00000580048 USP26Q9BXU7 913 aa12.46□□□□□ -0.42
LINC00909-202ENST00000580048 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
LINC00909-202ENST00000580048 GADD45BO75293 160 aaPredicted RBP12.45□□□□□ -0.42
LINC00909-202ENST00000580048 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
LINC00909-202ENST00000580048 CASC1Q6TDU7 716 aa12.45□□□□□ -0.42
LINC00909-202ENST00000580048 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
LINC00909-202ENST00000580048 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
LINC00909-202ENST00000580048 DISP1Q96F81 1524 aa12.45□□□□□ -0.42
LINC00909-202ENST00000580048 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
LINC00909-202ENST00000580048 SMARCA5O60264 1052 aaPredicted RBP12.44□□□□□ -0.42
LINC00909-202ENST00000580048 TMPOP42166 694 aaKnown RBP12.43□□□□□ -0.42
LINC00909-202ENST00000580048 PYCARDQ9ULZ3 195 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms