RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
ITGB4-206ENST00000579662 GNAI2P04899 355 aa18.39■□□□□ 0.53
ITGB4-206ENST00000579662 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
ITGB4-206ENST00000579662 ADGRL1O94910 1474 aa18.38■□□□□ 0.53
ITGB4-206ENST00000579662 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
ITGB4-206ENST00000579662 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
ITGB4-206ENST00000579662 PES1O00541 588 aaKnown RBP18.38■□□□□ 0.53
ITGB4-206ENST00000579662 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
ITGB4-206ENST00000579662 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGB4-206ENST00000579662 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
ITGB4-206ENST00000579662 SURF6O75683 361 aaKnown RBP18.38■□□□□ 0.53
ITGB4-206ENST00000579662 WASHC4Q2M389 1173 aa18.38■□□□□ 0.53
ITGB4-206ENST00000579662 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
ITGB4-206ENST00000579662 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
ITGB4-206ENST00000579662 BICD2Q8TD16 824 aa18.37■□□□□ 0.53
ITGB4-206ENST00000579662 GOLGA6L1Q8N7Z2 621 aa18.37■□□□□ 0.53
ITGB4-206ENST00000579662 ANKRD20A12PQ8NF67 263 aa18.37■□□□□ 0.53
ITGB4-206ENST00000579662 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
ITGB4-206ENST00000579662 TCEAL9Q9UHQ7 104 aa18.36■□□□□ 0.53
ITGB4-206ENST00000579662 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
ITGB4-206ENST00000579662 VPS37CA5D8V6 355 aaPredicted RBP18.36■□□□□ 0.53
ITGB4-206ENST00000579662 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
ITGB4-206ENST00000579662 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
ITGB4-206ENST00000579662 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
ITGB4-206ENST00000579662 FCHSD2O94868 740 aa18.36■□□□□ 0.53
ITGB4-206ENST00000579662 HDGFL1Q5TGJ6 251 aa18.36■□□□□ 0.53
ITGB4-206ENST00000579662 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.36■□□□□ 0.53
ITGB4-206ENST00000579662 FBXW7Q969H0 707 aa18.35■□□□□ 0.53
ITGB4-206ENST00000579662 NSD3Q9BZ95 1437 aa18.35■□□□□ 0.53
ITGB4-206ENST00000579662 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
ITGB4-206ENST00000579662 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
ITGB4-206ENST00000579662 RAD21O60216 631 aa18.34■□□□□ 0.53
ITGB4-206ENST00000579662 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
ITGB4-206ENST00000579662 MCM2P49736 904 aa18.34■□□□□ 0.53
ITGB4-206ENST00000579662 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.53
ITGB4-206ENST00000579662 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
ITGB4-206ENST00000579662 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
ITGB4-206ENST00000579662 CABP4P57796 275 aa18.33■□□□□ 0.52
ITGB4-206ENST00000579662 CCDC73Q6ZRK6 1079 aa18.32■□□□□ 0.52
ITGB4-206ENST00000579662 BRMS1Q9HCU9 246 aa18.31■□□□□ 0.52
ITGB4-206ENST00000579662 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
ITGB4-206ENST00000579662 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
ITGB4-206ENST00000579662 XBP1P17861 261 aa18.31■□□□□ 0.52
ITGB4-206ENST00000579662 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
ITGB4-206ENST00000579662 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
ITGB4-206ENST00000579662 SLC26A8Q96RN1 970 aa18.31■□□□□ 0.52
ITGB4-206ENST00000579662 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
ITGB4-206ENST00000579662 NUDT16Q96DE0 195 aaKnown RBP18.3■□□□□ 0.52
ITGB4-206ENST00000579662 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
ITGB4-206ENST00000579662 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
ITGB4-206ENST00000579662 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
ITGB4-206ENST00000579662 RABEP1Q15276 862 aa18.3■□□□□ 0.52
ITGB4-206ENST00000579662 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
ITGB4-206ENST00000579662 KCNH5Q8NCM2 988 aa18.29■□□□□ 0.52
ITGB4-206ENST00000579662 MVPQ14764 893 aaKnown RBP18.29■□□□□ 0.52
ITGB4-206ENST00000579662 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
ITGB4-206ENST00000579662 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
ITGB4-206ENST00000579662 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
ITGB4-206ENST00000579662 A0A0U1RQG5 324 aaPredicted RBP18.28■□□□□ 0.52
ITGB4-206ENST00000579662 BCAR3O75815 825 aa18.28■□□□□ 0.52
ITGB4-206ENST00000579662 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
ITGB4-206ENST00000579662 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
ITGB4-206ENST00000579662 LRRCC1Q9C099 1032 aa18.27■□□□□ 0.52
ITGB4-206ENST00000579662 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
ITGB4-206ENST00000579662 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
ITGB4-206ENST00000579662 THOC2Q8NI27 1593 aaKnown RBP18.27■□□□□ 0.51
ITGB4-206ENST00000579662 CCDC70Q6NSX1 233 aa18.27■□□□□ 0.51
ITGB4-206ENST00000579662 GNL3LQ9NVN8 582 aaKnown RBP18.26■□□□□ 0.51
ITGB4-206ENST00000579662 SLC3A2P08195 630 aaKnown RBP18.26■□□□□ 0.51
ITGB4-206ENST00000579662 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
ITGB4-206ENST00000579662 C1orf115Q9H7X2 142 aa18.25■□□□□ 0.51
ITGB4-206ENST00000579662 PDCP20941 246 aa18.25■□□□□ 0.51
ITGB4-206ENST00000579662 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
ITGB4-206ENST00000579662 PCMTD1Q96MG8 357 aaPredicted RBP18.25■□□□□ 0.51
ITGB4-206ENST00000579662 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
ITGB4-206ENST00000579662 CNNM1Q9NRU3 951 aa18.24■□□□□ 0.51
ITGB4-206ENST00000579662 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
ITGB4-206ENST00000579662 DENND4BO75064 1496 aaPredicted RBP18.24■□□□□ 0.51
ITGB4-206ENST00000579662 LETM1O95202 739 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-206ENST00000579662 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
ITGB4-206ENST00000579662 NAT10Q9H0A0 1025 aaKnown RBP18.23■□□□□ 0.51
ITGB4-206ENST00000579662 FYB1O15117 783 aa18.23■□□□□ 0.51
ITGB4-206ENST00000579662 FANCAO15360 1455 aa18.22■□□□□ 0.51
ITGB4-206ENST00000579662 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
ITGB4-206ENST00000579662 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
ITGB4-206ENST00000579662 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
ITGB4-206ENST00000579662 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
ITGB4-206ENST00000579662 CCDC43Q96MW1 224 aaKnown RBP18.22■□□□□ 0.51
ITGB4-206ENST00000579662 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
ITGB4-206ENST00000579662 NEK4P51957 841 aa18.21■□□□□ 0.51
ITGB4-206ENST00000579662 MBD3O95983 291 aa18.21■□□□□ 0.51
ITGB4-206ENST00000579662 RPAP2Q8IXW5 612 aaPredicted RBP18.21■□□□□ 0.51
ITGB4-206ENST00000579662 NSD2O96028 1365 aa18.21■□□□□ 0.51
ITGB4-206ENST00000579662 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
ITGB4-206ENST00000579662 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
ITGB4-206ENST00000579662 ANKRD1Q15327 319 aa18.2■□□□□ 0.5
ITGB4-206ENST00000579662 ZSCAN25Q6NSZ9 544 aa18.2■□□□□ 0.5
ITGB4-206ENST00000579662 DDX54Q8TDD1 881 aaKnown RBP18.2■□□□□ 0.5
ITGB4-206ENST00000579662 FOSBP53539 338 aa18.2■□□□□ 0.5
ITGB4-206ENST00000579662 OLFM4Q6UX06 510 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms