RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SPATA31A7Q8IWB4 1347 aa15.57■□□□□ 0.08
CSNK1D-210ENST00000579308 TRPM3Q9HCF6 1732 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-210ENST00000579308 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
CSNK1D-210ENST00000579308 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-210ENST00000579308 SF3B2Q13435 895 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-210ENST00000579308 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
CSNK1D-210ENST00000579308 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
CSNK1D-210ENST00000579308 PLCH1Q4KWH8 1693 aa15.54■□□□□ 0.08
CSNK1D-210ENST00000579308 ALS2Q96Q42 1657 aa15.54■□□□□ 0.08
CSNK1D-210ENST00000579308 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
CSNK1D-210ENST00000579308 NBPF8Q3BBV2 869 aa15.54■□□□□ 0.08
CSNK1D-210ENST00000579308 ATP7BP35670 1465 aa15.53■□□□□ 0.08
CSNK1D-210ENST00000579308 BRWD3Q6RI45 1802 aa15.53■□□□□ 0.08
CSNK1D-210ENST00000579308 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
CSNK1D-210ENST00000579308 CCDC61Q9Y6R9 512 aa15.53■□□□□ 0.08
CSNK1D-210ENST00000579308 POLR3AO14802 1390 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-210ENST00000579308 NBPF1Q3BBV0 1214 aa15.52■□□□□ 0.08
CSNK1D-210ENST00000579308 KIAA0232Q92628 1395 aa15.51■□□□□ 0.07
CSNK1D-210ENST00000579308 ACEP12821 1306 aa15.51■□□□□ 0.07
CSNK1D-210ENST00000579308 A0A0G2JS52 829 aa15.51■□□□□ 0.07
CSNK1D-210ENST00000579308 MYT1Q01538 1121 aa15.51■□□□□ 0.07
CSNK1D-210ENST00000579308 SPATA31A1Q5TZJ5 1347 aa15.5■□□□□ 0.07
CSNK1D-210ENST00000579308 COL14A1Q05707 1796 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-210ENST00000579308 CHRNA2Q15822 529 aa15.5■□□□□ 0.07
CSNK1D-210ENST00000579308 NRAPQ86VF7 1730 aa15.5■□□□□ 0.07
CSNK1D-210ENST00000579308 BAG6P46379 1132 aa15.49■□□□□ 0.07
CSNK1D-210ENST00000579308 FAM182BQ5T319 152 aa15.49■□□□□ 0.07
CSNK1D-210ENST00000579308 NUTM2GQ5VZR2 741 aa15.49■□□□□ 0.07
CSNK1D-210ENST00000579308 ZC3H6P61129 1189 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-210ENST00000579308 EN1Q05925 392 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-210ENST00000579308 ARHGEF28Q8N1W1 1705 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-210ENST00000579308 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.07
CSNK1D-210ENST00000579308 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
CSNK1D-210ENST00000579308 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
CSNK1D-210ENST00000579308 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
CSNK1D-210ENST00000579308 USP19O94966 1318 aa15.44■□□□□ 0.06
CSNK1D-210ENST00000579308 DISP2A7MBM2 1401 aa15.44■□□□□ 0.06
CSNK1D-210ENST00000579308 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
CSNK1D-210ENST00000579308 CPDO75976 1380 aa15.44■□□□□ 0.06
CSNK1D-210ENST00000579308 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
CSNK1D-210ENST00000579308 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-210ENST00000579308 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-210ENST00000579308 GCP02774 474 aa15.43■□□□□ 0.06
CSNK1D-210ENST00000579308 EVA1CP58658 441 aa15.43■□□□□ 0.06
CSNK1D-210ENST00000579308 CAMKK2Q96RR4 588 aa15.43■□□□□ 0.06
CSNK1D-210ENST00000579308 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
CSNK1D-210ENST00000579308 SRPK2P78362 688 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-210ENST00000579308 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-210ENST00000579308 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
CSNK1D-210ENST00000579308 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
CSNK1D-210ENST00000579308 TRIM37O94972 964 aa15.41■□□□□ 0.06
CSNK1D-210ENST00000579308 EZH2Q15910 746 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-210ENST00000579308 NLRP13Q86W25 1043 aa15.41■□□□□ 0.06
CSNK1D-210ENST00000579308 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
CSNK1D-210ENST00000579308 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
CSNK1D-210ENST00000579308 BRD4O60885 1362 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 CABP1Q9NZU7 370 aa15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 TOPAZ1Q8N9V7 1692 aa15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 PPIP5K1Q6PFW1 1433 aa15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 ITSN1Q15811 1721 aa15.4■□□□□ 0.06
CSNK1D-210ENST00000579308 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
CSNK1D-210ENST00000579308 PDE3BQ13370 1112 aa15.38■□□□□ 0.05
CSNK1D-210ENST00000579308 R3HDM1Q15032 1099 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-210ENST00000579308 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-210ENST00000579308 APBA3O96018 575 aa15.37■□□□□ 0.05
CSNK1D-210ENST00000579308 NRKQ7Z2Y5 1582 aa15.36■□□□□ 0.05
CSNK1D-210ENST00000579308 LRP5O75197 1615 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 USP6P35125 1406 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 NLRP6P59044 892 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 AATKQ6ZMQ8 1374 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 LMO7Q8WWI1 1683 aa15.35■□□□□ 0.05
CSNK1D-210ENST00000579308 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
CSNK1D-210ENST00000579308 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
CSNK1D-210ENST00000579308 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.05
CSNK1D-210ENST00000579308 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-210ENST00000579308 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
CSNK1D-210ENST00000579308 TNS1Q9HBL0 1735 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-210ENST00000579308 CRB1P82279 1406 aa15.31■□□□□ 0.04
CSNK1D-210ENST00000579308 C11orf95C9JLR9 678 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-210ENST00000579308 SLIT3O75094 1523 aa15.3■□□□□ 0.04
CSNK1D-210ENST00000579308 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
CSNK1D-210ENST00000579308 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
CSNK1D-210ENST00000579308 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
CSNK1D-210ENST00000579308 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
CSNK1D-210ENST00000579308 CPSF1Q10570 1443 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-210ENST00000579308 ROCK2O75116 1388 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-210ENST00000579308 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
CSNK1D-210ENST00000579308 TOM1L2Q6ZVM7 507 aa15.27■□□□□ 0.04
CSNK1D-210ENST00000579308 TTC21AQ8NDW8 1320 aa15.26■□□□□ 0.03
CSNK1D-210ENST00000579308 PLSCR1O15162 318 aa15.26■□□□□ 0.03
CSNK1D-210ENST00000579308 DDB1Q16531 1140 aa15.26■□□□□ 0.03
CSNK1D-210ENST00000579308 NBPF14Q5TI25 921 aa15.26■□□□□ 0.03
CSNK1D-210ENST00000579308 KCNH5Q8NCM2 988 aa15.26■□□□□ 0.03
CSNK1D-210ENST00000579308 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
CSNK1D-210ENST00000579308 PTF1AQ7RTS3 328 aa15.25■□□□□ 0.03
CSNK1D-210ENST00000579308 MARCH10Q8NA82 808 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms