RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 QTRT2Q9H974 415 aaKnown RBP24.63■■□□□ 1.53
ITGB4-205ENST00000579211 RXRBP28702 533 aa24.62■■□□□ 1.53
ITGB4-205ENST00000579211 SBNO2Q9Y2G9 1366 aa24.62■■□□□ 1.53
ITGB4-205ENST00000579211 ST20-MTHFSA0A0A6YYL1 179 aa24.61■■□□□ 1.53
ITGB4-205ENST00000579211 AKAP12Q02952 1782 aa24.61■■□□□ 1.53
ITGB4-205ENST00000579211 ATAD2Q6PL18 1390 aa24.6■■□□□ 1.53
ITGB4-205ENST00000579211 SLC24A1O60721 1099 aa24.6■■□□□ 1.53
ITGB4-205ENST00000579211 ABTB2Q8N961 1025 aa24.6■■□□□ 1.53
ITGB4-205ENST00000579211 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
ITGB4-205ENST00000579211 TMC1Q8TDI8 760 aa24.58■■□□□ 1.53
ITGB4-205ENST00000579211 PLCH1Q4KWH8 1693 aa24.57■■□□□ 1.52
ITGB4-205ENST00000579211 FNBP4Q8N3X1 1017 aaPredicted RBP24.57■■□□□ 1.52
ITGB4-205ENST00000579211 USP47Q96K76 1375 aa24.56■■□□□ 1.52
ITGB4-205ENST00000579211 CRYBG1Q9Y4K1 1723 aa24.56■■□□□ 1.52
ITGB4-205ENST00000579211 ZNF692Q9BU19 519 aaPredicted RBP24.56■■□□□ 1.52
ITGB4-205ENST00000579211 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
ITGB4-205ENST00000579211 NWD2Q9ULI1 1742 aa24.55■■□□□ 1.52
ITGB4-205ENST00000579211 PHRF1Q9P1Y6 1649 aaKnown RBP24.54■■□□□ 1.52
ITGB4-205ENST00000579211 RBM6P78332 1123 aaKnown RBP24.54■■□□□ 1.52
ITGB4-205ENST00000579211 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.54■■□□□ 1.52
ITGB4-205ENST00000579211 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
ITGB4-205ENST00000579211 USP6P35125 1406 aa24.52■■□□□ 1.52
ITGB4-205ENST00000579211 NLRP13Q86W25 1043 aa24.52■■□□□ 1.52
ITGB4-205ENST00000579211 COL14A1Q05707 1796 aaKnown RBP24.52■■□□□ 1.52
ITGB4-205ENST00000579211 TMF1P82094 1093 aa24.51■■□□□ 1.51
ITGB4-205ENST00000579211 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
ITGB4-205ENST00000579211 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
ITGB4-205ENST00000579211 UNC5CLQ8IV45 518 aa24.5■■□□□ 1.51
ITGB4-205ENST00000579211 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
ITGB4-205ENST00000579211 TESK2Q96S53 571 aa24.49■■□□□ 1.51
ITGB4-205ENST00000579211 BCL9LQ86UU0 1499 aa24.49■■□□□ 1.51
ITGB4-205ENST00000579211 FAM83GA6ND36 823 aa24.48■■□□□ 1.51
ITGB4-205ENST00000579211 NLRP6P59044 892 aa24.48■■□□□ 1.51
ITGB4-205ENST00000579211 PUS7Q96PZ0 661 aaKnown RBP24.48■■□□□ 1.51
ITGB4-205ENST00000579211 PRDM11Q9NQV5 511 aa24.48■■□□□ 1.51
ITGB4-205ENST00000579211 CCDC9Q9Y3X0 531 aaKnown RBP24.48■■□□□ 1.51
ITGB4-205ENST00000579211 SLIT2O94813 1529 aa24.47■■□□□ 1.51
ITGB4-205ENST00000579211 ATRNO75882 1429 aa24.46■■□□□ 1.51
ITGB4-205ENST00000579211 ZC3H6P61129 1189 aaKnown RBP24.46■■□□□ 1.51
ITGB4-205ENST00000579211 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
ITGB4-205ENST00000579211 TERF2IPQ9NYB0 399 aa24.46■■□□□ 1.51
ITGB4-205ENST00000579211 CDCA8Q53HL2 280 aa24.45■■□□□ 1.5
ITGB4-205ENST00000579211 BTG4Q9NY30 223 aa24.45■■□□□ 1.5
ITGB4-205ENST00000579211 PIK3C2AO00443 1686 aa24.45■■□□□ 1.5
ITGB4-205ENST00000579211 TTC21BQ7Z4L5 1316 aa24.44■■□□□ 1.5
ITGB4-205ENST00000579211 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
ITGB4-205ENST00000579211 GJD4Q96KN9 370 aaPredicted RBP24.43■■□□□ 1.5
ITGB4-205ENST00000579211 CPSF1Q10570 1443 aaKnown RBP24.43■■□□□ 1.5
ITGB4-205ENST00000579211 KIAA0232Q92628 1395 aa24.42■■□□□ 1.5
ITGB4-205ENST00000579211 NRKQ7Z2Y5 1582 aa24.42■■□□□ 1.5
ITGB4-205ENST00000579211 TTC21AQ8NDW8 1320 aa24.42■■□□□ 1.5
ITGB4-205ENST00000579211 ZBTB7CA1YPR0 619 aa24.42■■□□□ 1.5
ITGB4-205ENST00000579211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.42■■□□□ 1.5
ITGB4-205ENST00000579211 NRAPQ86VF7 1730 aa24.41■■□□□ 1.5
ITGB4-205ENST00000579211 CHRNA2Q15822 529 aa24.41■■□□□ 1.5
ITGB4-205ENST00000579211 GCP02774 474 aa24.4■■□□□ 1.5
ITGB4-205ENST00000579211 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.5
ITGB4-205ENST00000579211 NINLQ9Y2I6 1382 aa24.4■■□□□ 1.5
ITGB4-205ENST00000579211 SSH2Q76I76 1423 aa24.39■■□□□ 1.5
ITGB4-205ENST00000579211 USP19O94966 1318 aa24.38■■□□□ 1.49
ITGB4-205ENST00000579211 RGS12O14924 1447 aa24.38■■□□□ 1.49
ITGB4-205ENST00000579211 VPS72Q15906 364 aa24.38■■□□□ 1.49
ITGB4-205ENST00000579211 EVA1CP58658 441 aa24.37■■□□□ 1.49
ITGB4-205ENST00000579211 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
ITGB4-205ENST00000579211 SOX12O15370 315 aa24.36■■□□□ 1.49
ITGB4-205ENST00000579211 POLR3GLQ9BT43 218 aa24.36■■□□□ 1.49
ITGB4-205ENST00000579211 STRN4Q9NRL3 753 aa24.36■■□□□ 1.49
ITGB4-205ENST00000579211 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
ITGB4-205ENST00000579211 GLI3P10071 1580 aa24.35■■□□□ 1.49
ITGB4-205ENST00000579211 KCNH5Q8NCM2 988 aa24.35■■□□□ 1.49
ITGB4-205ENST00000579211 BRWD3Q6RI45 1802 aa24.34■■□□□ 1.49
ITGB4-205ENST00000579211 A0A0G2JS52 829 aa24.34■■□□□ 1.49
ITGB4-205ENST00000579211 MYT1Q01538 1121 aa24.34■■□□□ 1.49
ITGB4-205ENST00000579211 EDC4Q6P2E9 1401 aaKnown RBP24.34■■□□□ 1.49
ITGB4-205ENST00000579211 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
ITGB4-205ENST00000579211 SLIT3O75094 1523 aa24.33■■□□□ 1.49
ITGB4-205ENST00000579211 RGPD5Q99666 1765 aa24.33■■□□□ 1.49
ITGB4-205ENST00000579211 CPDO75976 1380 aa24.32■■□□□ 1.48
ITGB4-205ENST00000579211 NME9Q86XW9 330 aa24.31■■□□□ 1.48
ITGB4-205ENST00000579211 LTN1O94822 1766 aa24.3■■□□□ 1.48
ITGB4-205ENST00000579211 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
ITGB4-205ENST00000579211 ZRANB1Q9UGI0 708 aa24.29■■□□□ 1.48
ITGB4-205ENST00000579211 USP54Q70EL1 1684 aa24.29■■□□□ 1.48
ITGB4-205ENST00000579211 MYOM1P52179 1685 aa24.27■■□□□ 1.48
ITGB4-205ENST00000579211 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
ITGB4-205ENST00000579211 KIF20BQ96Q89 1820 aa24.27■■□□□ 1.48
ITGB4-205ENST00000579211 CAMTA1Q9Y6Y1 1673 aa24.27■■□□□ 1.48
ITGB4-205ENST00000579211 FAM98CQ17RN3 349 aaKnown RBP24.26■■□□□ 1.47
ITGB4-205ENST00000579211 SEPT12Q8IYM1 358 aa24.26■■□□□ 1.47
ITGB4-205ENST00000579211 USP35Q9P2H5 1018 aa24.26■■□□□ 1.47
ITGB4-205ENST00000579211 USP31Q70CQ4 1352 aa24.26■■□□□ 1.47
ITGB4-205ENST00000579211 SPATA31A5Q5VU36 1347 aa24.25■■□□□ 1.47
ITGB4-205ENST00000579211 SPATA31A7Q8IWB4 1347 aa24.25■■□□□ 1.47
ITGB4-205ENST00000579211 COG3Q96JB2 828 aa24.24■■□□□ 1.47
ITGB4-205ENST00000579211 COL18A1P39060 1754 aa24.24■■□□□ 1.47
ITGB4-205ENST00000579211 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
ITGB4-205ENST00000579211 ARHGEF25Q86VW2 580 aa24.22■■□□□ 1.47
ITGB4-205ENST00000579211 UPF1Q92900 1129 aaKnown RBP eCLIP24.22■■□□□ 1.47
ITGB4-205ENST00000579211 SPATA31A1Q5TZJ5 1347 aa24.21■■□□□ 1.47
ITGB4-205ENST00000579211 LARP1Q6PKG0 1096 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 864.6 ms