RNA–Protein interactions for RNA: ENST00000579039.2

NCOA4-202, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 2 BASIC

Gene NCOA4, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-202ENST00000579039 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
NCOA4-202ENST00000579039 DDRGK1Q96HY6 314 aa13.62□□□□□ -0.23
NCOA4-202ENST00000579039 PKNOX2Q96KN3 472 aa13.62□□□□□ -0.23
NCOA4-202ENST00000579039 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
NCOA4-202ENST00000579039 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
NCOA4-202ENST00000579039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
NCOA4-202ENST00000579039 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
NCOA4-202ENST00000579039 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
NCOA4-202ENST00000579039 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
NCOA4-202ENST00000579039 ATP7BP35670 1465 aa13.6□□□□□ -0.23
NCOA4-202ENST00000579039 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
NCOA4-202ENST00000579039 PRR36Q9H6K5 1346 aa13.6□□□□□ -0.23
NCOA4-202ENST00000579039 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
NCOA4-202ENST00000579039 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
NCOA4-202ENST00000579039 ANKLE2Q86XL3 938 aa13.59□□□□□ -0.23
NCOA4-202ENST00000579039 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
NCOA4-202ENST00000579039 APAF1O14727 1248 aa13.58□□□□□ -0.24
NCOA4-202ENST00000579039 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
NCOA4-202ENST00000579039 SETD1BQ9UPS6 1966 aaKnown RBP13.57□□□□□ -0.24
NCOA4-202ENST00000579039 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
NCOA4-202ENST00000579039 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
NCOA4-202ENST00000579039 KCNA6P17658 529 aa13.56□□□□□ -0.24
NCOA4-202ENST00000579039 NFKBIBQ15653 356 aa13.55□□□□□ -0.24
NCOA4-202ENST00000579039 FRAT1Q92837 279 aaPredicted RBP13.55□□□□□ -0.24
NCOA4-202ENST00000579039 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
NCOA4-202ENST00000579039 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
NCOA4-202ENST00000579039 ZNF521Q96K83 1311 aa13.55□□□□□ -0.24
NCOA4-202ENST00000579039 FBLN1P23142 703 aa13.54□□□□□ -0.24
NCOA4-202ENST00000579039 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
NCOA4-202ENST00000579039 NME9Q86XW9 330 aa13.54□□□□□ -0.24
NCOA4-202ENST00000579039 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
NCOA4-202ENST00000579039 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
NCOA4-202ENST00000579039 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
NCOA4-202ENST00000579039 ZNF142P52746 1687 aaPredicted RBP13.54□□□□□ -0.24
NCOA4-202ENST00000579039 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
NCOA4-202ENST00000579039 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
NCOA4-202ENST00000579039 ACEP12821 1306 aa13.52□□□□□ -0.25
NCOA4-202ENST00000579039 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
NCOA4-202ENST00000579039 PLEKHG3A1L390 1219 aa13.52□□□□□ -0.25
NCOA4-202ENST00000579039 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.25
NCOA4-202ENST00000579039 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.25
NCOA4-202ENST00000579039 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
NCOA4-202ENST00000579039 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.25
NCOA4-202ENST00000579039 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
NCOA4-202ENST00000579039 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
NCOA4-202ENST00000579039 RUNDC1Q96C34 613 aa13.51□□□□□ -0.25
NCOA4-202ENST00000579039 POLKQ9UBT6 870 aa13.51□□□□□ -0.25
NCOA4-202ENST00000579039 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
NCOA4-202ENST00000579039 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
NCOA4-202ENST00000579039 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
NCOA4-202ENST00000579039 NKTRP30414 1462 aaKnown RBP13.49□□□□□ -0.25
NCOA4-202ENST00000579039 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
NCOA4-202ENST00000579039 U2SURPO15042 1029 aaKnown RBP13.49□□□□□ -0.25
NCOA4-202ENST00000579039 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
NCOA4-202ENST00000579039 TCP11L2Q8N4U5 519 aa13.49□□□□□ -0.25
NCOA4-202ENST00000579039 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
NCOA4-202ENST00000579039 COG3Q96JB2 828 aa13.49□□□□□ -0.25
NCOA4-202ENST00000579039 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
NCOA4-202ENST00000579039 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
NCOA4-202ENST00000579039 COL3A1P02461 1466 aaPredicted RBP13.49□□□□□ -0.25
NCOA4-202ENST00000579039 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
NCOA4-202ENST00000579039 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
NCOA4-202ENST00000579039 MON2Q7Z3U7 1717 aa13.48□□□□□ -0.25
NCOA4-202ENST00000579039 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
NCOA4-202ENST00000579039 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
NCOA4-202ENST00000579039 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
NCOA4-202ENST00000579039 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
NCOA4-202ENST00000579039 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
NCOA4-202ENST00000579039 EXOC6Q8TAG9 804 aa13.47□□□□□ -0.25
NCOA4-202ENST00000579039 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
NCOA4-202ENST00000579039 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
NCOA4-202ENST00000579039 USP6P35125 1406 aa13.47□□□□□ -0.25
NCOA4-202ENST00000579039 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
NCOA4-202ENST00000579039 ITSN1Q15811 1721 aa13.46□□□□□ -0.25
NCOA4-202ENST00000579039 RRS1Q15050 365 aaKnown RBP13.45□□□□□ -0.26
NCOA4-202ENST00000579039 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
NCOA4-202ENST00000579039 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
NCOA4-202ENST00000579039 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
NCOA4-202ENST00000579039 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
NCOA4-202ENST00000579039 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
NCOA4-202ENST00000579039 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
NCOA4-202ENST00000579039 E9PSI1 815 aa13.44□□□□□ -0.26
NCOA4-202ENST00000579039 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
NCOA4-202ENST00000579039 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
NCOA4-202ENST00000579039 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
NCOA4-202ENST00000579039 DAXXQ9UER7 740 aaPredicted RBP13.43□□□□□ -0.26
NCOA4-202ENST00000579039 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
NCOA4-202ENST00000579039 NRKQ7Z2Y5 1582 aa13.42□□□□□ -0.26
NCOA4-202ENST00000579039 RGPD8O14715 1765 aaPredicted RBP13.42□□□□□ -0.26
NCOA4-202ENST00000579039 PLIN1O60240 522 aa13.41□□□□□ -0.26
NCOA4-202ENST00000579039 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
NCOA4-202ENST00000579039 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
NCOA4-202ENST00000579039 CCDC27Q2M243 656 aa13.41□□□□□ -0.26
NCOA4-202ENST00000579039 IL13P35225 146 aa13.4□□□□□ -0.26
NCOA4-202ENST00000579039 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
NCOA4-202ENST00000579039 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
NCOA4-202ENST00000579039 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
NCOA4-202ENST00000579039 SOX12O15370 315 aa13.4□□□□□ -0.26
NCOA4-202ENST00000579039 FCHSD2O94868 740 aa13.4□□□□□ -0.26
NCOA4-202ENST00000579039 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms