RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 MYOM1P52179 1685 aa12.38□□□□□ -0.43
PPP4R1-211ENST00000578875 TMEM132EQ6IEE7 984 aa12.37□□□□□ -0.43
PPP4R1-211ENST00000578875 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
PPP4R1-211ENST00000578875 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
PPP4R1-211ENST00000578875 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
PPP4R1-211ENST00000578875 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-211ENST00000578875 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
PPP4R1-211ENST00000578875 PRDM11Q9NQV5 511 aa12.35□□□□□ -0.43
PPP4R1-211ENST00000578875 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
PPP4R1-211ENST00000578875 ARHGEF10O15013 1369 aa12.34□□□□□ -0.43
PPP4R1-211ENST00000578875 HSPA6P17066 643 aa12.34□□□□□ -0.43
PPP4R1-211ENST00000578875 TECPR2O15040 1411 aa12.34□□□□□ -0.43
PPP4R1-211ENST00000578875 CASZ1Q86V15 1759 aa12.33□□□□□ -0.44
PPP4R1-211ENST00000578875 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-211ENST00000578875 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-211ENST00000578875 PLSCR1O15162 318 aa12.32□□□□□ -0.44
PPP4R1-211ENST00000578875 COL13A1Q5TAT6 717 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-211ENST00000578875 ARXQ96QS3 562 aa12.32□□□□□ -0.44
PPP4R1-211ENST00000578875 CLTCL1P53675 1640 aa12.31□□□□□ -0.44
PPP4R1-211ENST00000578875 ZC3H6P61129 1189 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-211ENST00000578875 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-211ENST00000578875 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
PPP4R1-211ENST00000578875 ADGRF5Q8IZF2 1346 aa12.31□□□□□ -0.44
PPP4R1-211ENST00000578875 COL14A1Q05707 1796 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-211ENST00000578875 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
PPP4R1-211ENST00000578875 EVA1CP58658 441 aa12.3□□□□□ -0.44
PPP4R1-211ENST00000578875 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
PPP4R1-211ENST00000578875 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
PPP4R1-211ENST00000578875 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
PPP4R1-211ENST00000578875 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
PPP4R1-211ENST00000578875 MTFR1LQ9H019 292 aa12.29□□□□□ -0.44
PPP4R1-211ENST00000578875 KIAA0232Q92628 1395 aa12.29□□□□□ -0.44
PPP4R1-211ENST00000578875 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-211ENST00000578875 NRXN1Q9ULB1 1477 aa12.28□□□□□ -0.44
PPP4R1-211ENST00000578875 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
PPP4R1-211ENST00000578875 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
PPP4R1-211ENST00000578875 KIF1AQ12756 1690 aa12.28□□□□□ -0.44
PPP4R1-211ENST00000578875 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
PPP4R1-211ENST00000578875 TCP11L2Q8N4U5 519 aa12.27□□□□□ -0.45
PPP4R1-211ENST00000578875 ABCC11Q96J66 1382 aa12.27□□□□□ -0.45
PPP4R1-211ENST00000578875 ITGAEP38570 1179 aa12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 NUTM2GQ5VZR2 741 aa12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 DNAJC5GQ8N7S2 189 aa12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 ZNF526Q8TF50 670 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 DLC1Q96QB1 1528 aa12.26□□□□□ -0.45
PPP4R1-211ENST00000578875 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
PPP4R1-211ENST00000578875 APLP2Q06481 763 aa12.25□□□□□ -0.45
PPP4R1-211ENST00000578875 NLGN2Q8NFZ4 835 aa12.25□□□□□ -0.45
PPP4R1-211ENST00000578875 ATP10DQ9P241 1426 aa12.23□□□□□ -0.45
PPP4R1-211ENST00000578875 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-211ENST00000578875 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
PPP4R1-211ENST00000578875 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-211ENST00000578875 SLC34A2O95436 690 aa12.22□□□□□ -0.45
PPP4R1-211ENST00000578875 PRELPP51888 382 aa12.22□□□□□ -0.45
PPP4R1-211ENST00000578875 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
PPP4R1-211ENST00000578875 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
PPP4R1-211ENST00000578875 PRR36Q9H6K5 1346 aa12.21□□□□□ -0.45
PPP4R1-211ENST00000578875 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-211ENST00000578875 KIF1BO60333 1816 aa12.21□□□□□ -0.46
PPP4R1-211ENST00000578875 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-211ENST00000578875 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
PPP4R1-211ENST00000578875 SIRT1Q96EB6 747 aa12.2□□□□□ -0.46
PPP4R1-211ENST00000578875 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
PPP4R1-211ENST00000578875 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-211ENST00000578875 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
PPP4R1-211ENST00000578875 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
PPP4R1-211ENST00000578875 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-211ENST00000578875 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
PPP4R1-211ENST00000578875 NGDNQ8NEJ9 315 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-211ENST00000578875 HTRA3P83110 453 aa12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 THRAP3Q9Y2W1 955 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 OVOS2A0A0G2JMS6 1433 aa12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
PPP4R1-211ENST00000578875 PPLO60437 1756 aa12.16□□□□□ -0.46
PPP4R1-211ENST00000578875 KIF3CO14782 793 aa12.16□□□□□ -0.46
PPP4R1-211ENST00000578875 DDB1Q16531 1140 aa12.16□□□□□ -0.46
PPP4R1-211ENST00000578875 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
PPP4R1-211ENST00000578875 IFT172Q9UG01 1749 aa12.16□□□□□ -0.46
PPP4R1-211ENST00000578875 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-211ENST00000578875 GRIN3BO60391 1043 aa12.15□□□□□ -0.46
PPP4R1-211ENST00000578875 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
PPP4R1-211ENST00000578875 SBF2Q86WG5 1849 aa12.15□□□□□ -0.46
PPP4R1-211ENST00000578875 APLP1P51693 650 aa12.14□□□□□ -0.47
PPP4R1-211ENST00000578875 POGKQ9P215 609 aa12.14□□□□□ -0.47
PPP4R1-211ENST00000578875 GOLGB1Q14789 3259 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-211ENST00000578875 MINK1Q8N4C8 1332 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-211ENST00000578875 C14orf93Q9H972 538 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-211ENST00000578875 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
PPP4R1-211ENST00000578875 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-211ENST00000578875 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-211ENST00000578875 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
PPP4R1-211ENST00000578875 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
PPP4R1-211ENST00000578875 ATP7BP35670 1465 aa12.11□□□□□ -0.47
PPP4R1-211ENST00000578875 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
PPP4R1-211ENST00000578875 ACSBG1Q96GR2 724 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms