RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.87
UBB-208ENST00000578706 TECPR2O15040 1411 aa9.65□□□□□ -0.87
UBB-208ENST00000578706 LOC105371045A0A1W2PR82 267 aa9.64□□□□□ -0.87
UBB-208ENST00000578706 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
UBB-208ENST00000578706 NUP155O75694 1391 aa9.63□□□□□ -0.87
UBB-208ENST00000578706 APLP2Q06481 763 aa9.63□□□□□ -0.87
UBB-208ENST00000578706 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
UBB-208ENST00000578706 SYT17Q9BSW7 474 aa9.63□□□□□ -0.87
UBB-208ENST00000578706 FHDC1Q9C0D6 1143 aaPredicted RBP9.63□□□□□ -0.87
UBB-208ENST00000578706 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
UBB-208ENST00000578706 PEAK1Q9H792 1746 aa9.62□□□□□ -0.87
UBB-208ENST00000578706 DLC1Q96QB1 1528 aa9.62□□□□□ -0.87
UBB-208ENST00000578706 SPATA31A1Q5TZJ5 1347 aa9.62□□□□□ -0.87
UBB-208ENST00000578706 SBF2Q86WG5 1849 aa9.62□□□□□ -0.87
UBB-208ENST00000578706 ZBTB7AO95365 584 aa9.62□□□□□ -0.87
UBB-208ENST00000578706 SGIP1Q9BQI5 828 aa9.61□□□□□ -0.87
UBB-208ENST00000578706 LMOD2Q6P5Q4 547 aa9.6□□□□□ -0.87
UBB-208ENST00000578706 PHF8Q9UPP1 1060 aa9.6□□□□□ -0.87
UBB-208ENST00000578706 ATF5Q9Y2D1 282 aaPredicted RBP9.59□□□□□ -0.87
UBB-208ENST00000578706 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
UBB-208ENST00000578706 PSME1Q06323 249 aa9.58□□□□□ -0.88
UBB-208ENST00000578706 PARP4Q9UKK3 1724 aaKnown RBP9.58□□□□□ -0.88
UBB-208ENST00000578706 PHRF1Q9P1Y6 1649 aaKnown RBP9.57□□□□□ -0.88
UBB-208ENST00000578706 ROCK1Q13464 1354 aa9.57□□□□□ -0.88
UBB-208ENST00000578706 ABCC11Q96J66 1382 aa9.56□□□□□ -0.88
UBB-208ENST00000578706 MAP3K5Q99683 1374 aa9.56□□□□□ -0.88
UBB-208ENST00000578706 FAM50AQ14320 339 aaKnown RBP9.56□□□□□ -0.88
UBB-208ENST00000578706 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
UBB-208ENST00000578706 PROM2Q8N271 834 aa9.56□□□□□ -0.88
UBB-208ENST00000578706 STK26Q9P289 416 aa9.56□□□□□ -0.88
UBB-208ENST00000578706 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
UBB-208ENST00000578706 KIAA0232Q92628 1395 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 LRRC37A3O60309 1634 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 PLSCR1O15162 318 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 PRDM11Q9NQV5 511 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 USP35Q9P2H5 1018 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 SSH2Q76I76 1423 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 LMO7Q8WWI1 1683 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 ADGRF5Q8IZF2 1346 aa9.54□□□□□ -0.88
UBB-208ENST00000578706 HSPA6P17066 643 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 TMEM132EQ6IEE7 984 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 PMFBP1Q8TBY8 1022 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
UBB-208ENST00000578706 COL24A1Q17RW2 1714 aa9.52□□□□□ -0.89
UBB-208ENST00000578706 YTHDC2Q9H6S0 1430 aaKnown RBP9.52□□□□□ -0.89
UBB-208ENST00000578706 PAPPAQ13219 1627 aa9.52□□□□□ -0.89
UBB-208ENST00000578706 OVOS2A0A0G2JMS6 1433 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 OVOS2A0A0J9YW53 1432 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 OVOS2Q6IE36 1432 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 ANKARQ7Z5J8 1434 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 MTFR1LQ9H019 292 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 ATP7BP35670 1465 aa9.51□□□□□ -0.89
UBB-208ENST00000578706 GPR162Q16538 588 aa9.5□□□□□ -0.89
UBB-208ENST00000578706 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
UBB-208ENST00000578706 ARXQ96QS3 562 aa9.5□□□□□ -0.89
UBB-208ENST00000578706 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
UBB-208ENST00000578706 ACIN1Q9UKV3 1341 aaKnown RBP9.5□□□□□ -0.89
UBB-208ENST00000578706 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
UBB-208ENST00000578706 PIK3C2GO75747 1445 aa9.49□□□□□ -0.89
UBB-208ENST00000578706 SLC34A2O95436 690 aa9.49□□□□□ -0.89
UBB-208ENST00000578706 SLC15A2Q16348 729 aa9.49□□□□□ -0.89
UBB-208ENST00000578706 PRR36Q9H6K5 1346 aa9.49□□□□□ -0.89
UBB-208ENST00000578706 CAPN15O75808 1086 aa9.48□□□□□ -0.89
UBB-208ENST00000578706 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
UBB-208ENST00000578706 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
UBB-208ENST00000578706 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
UBB-208ENST00000578706 TOPAZ1Q8N9V7 1692 aa9.47□□□□□ -0.89
UBB-208ENST00000578706 ADCY9O60503 1353 aa9.47□□□□□ -0.89
UBB-208ENST00000578706 AKAP12Q02952 1782 aa9.47□□□□□ -0.89
UBB-208ENST00000578706 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.91e-36■■□□□ 14.4
UBB-208ENST00000578706 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
UBB-208ENST00000578706 TXNRD1Q16881 649 aa9.46□□□□□ -0.9
UBB-208ENST00000578706 DNAJC5GQ8N7S2 189 aa9.46□□□□□ -0.9
UBB-208ENST00000578706 NLGN2Q8NFZ4 835 aa9.46□□□□□ -0.9
UBB-208ENST00000578706 STK32BQ9NY57 414 aa9.46□□□□□ -0.9
UBB-208ENST00000578706 GPRASP1Q5JY77 1395 aa9.46□□□□□ -0.9
UBB-208ENST00000578706 DHX57Q6P158 1386 aaKnown RBP9.46□□□□□ -0.9
UBB-208ENST00000578706 COL5A2P05997 1499 aaPredicted RBP9.46□□□□□ -0.9
UBB-208ENST00000578706 AATKQ6ZMQ8 1374 aa9.45□□□□□ -0.9
UBB-208ENST00000578706 BCL9O00512 1426 aa9.45□□□□□ -0.9
UBB-208ENST00000578706 SPATA31E1Q6ZUB1 1445 aa9.45□□□□□ -0.9
UBB-208ENST00000578706 TULP4Q9NRJ4 1543 aa9.45□□□□□ -0.9
UBB-208ENST00000578706 PCNTO95613 3336 aa9.44□□□□□ -0.9
UBB-208ENST00000578706 PRELPP51888 382 aa9.44□□□□□ -0.9
UBB-208ENST00000578706 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBB-208ENST00000578706 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
UBB-208ENST00000578706 QSER1Q2KHR3 1735 aa9.44□□□□□ -0.9
UBB-208ENST00000578706 TUBGCP6Q96RT7 1819 aa9.44□□□□□ -0.9
UBB-208ENST00000578706 C11orf95C9JLR9 678 aaPredicted RBP9.43□□□□□ -0.9
UBB-208ENST00000578706 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
UBB-208ENST00000578706 THRAP3Q9Y2W1 955 aaKnown RBP9.43□□□□□ -0.9
UBB-208ENST00000578706 CPDO75976 1380 aa9.42□□□□□ -0.9
UBB-208ENST00000578706 PAK3O75914 559 aaPredicted RBP9.42□□□□□ -0.9
UBB-208ENST00000578706 ITGAEP38570 1179 aa9.42□□□□□ -0.9
UBB-208ENST00000578706 EVA1CP58658 441 aa9.42□□□□□ -0.9
UBB-208ENST00000578706 ZNF827Q17R98 1081 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms